Schistosoma mansoni: Smp_154640
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Entry
Smp_154640 CDS
T01095
Name
(RefSeq) SWI/SNF-related
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_154640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_154640
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_154640
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Smp_154640
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Smp_154640
PBAF complex
Smp_154640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
8342489
NCBI-ProteinID:
XP_018648669
LinkDB
All DBs
Position
1:35795535..35802367
Genome browser
AA seq
993 aa
AA seq
DB search
MVTNLLAYSCTYMTSNMRLMDSKSYYFQSPHNNNTFQAIRMNSKSDMRVPKPPKPPEKPL
MPYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKLLYVEEYDTEKTQYTELL
RQYHSSPAYQAWLVAKERAEKSMEEQDQERRQSILRSRDRGNELPQGDLRESYILEDNEE
DTEDQFTAKHVAAARFQRNHRLMQEVLSDTRLPDPGQLITQSRLNTLRLQVEQLKNHKRN
LCQEIEGCEARHQAKVQRIREESERFRLDYQKTTTARPVITESQFADMIIKAKYDMQREE
EERKTRYLAELEIRRKRQQQRQQREAELLESERRRQLLHQQQLQQVHMRPNQAVPPHNDP
NIHFGDRSLERLIAQDKKEDTNSQPPQKLPSASANLLCPANHPKAASEIGHEINPGMYTG
MGNTFTQPVTQSSSQRFPQSGHTQHHYPPPLHYVPNAATPANPPVLIHQRSPVPNIQQAA
QNNTGKPNAVSLSRTKKVPSSASSTSSASSASSTSSKKKKVDSDLVKDAAVTTTSQDIRE
RPISRSGEGVMDQTKPGDFGMTPGQSNEFQQGCTAQSRQLITSQYQPVPPPANPVVPAQI
SGGPVQTPYCYEIGIGNPSNPTLSAGTYYHQPVSVSNPVGYSHPRPQFSQHTPYNTVQYH
SVPPQQSAEHPPPPPMYIQHMPQQSHVPQLVPPMVGPTQHPSSHIPPQQHNSNNWHHGGP
PPYSPHYGQPRYPVLGGSVGYPMQPPRNFGPNSSGYSMPHYLVGQHGPQTHPHQNISSVP
VSIQEGPAASQPIPAPPPYQQQQQPNSVVSYWPTQQQVPPDYVQSQHPSHYMPGSQTEPV
VPNQQTLSSVDNVHPCSTMSVSSADVGMGQMVSNQSQGANIYYQGCPVPPYTHGSNVGPS
GFYSVPPQHYTPHQHSGHSWSGYSNSGPSQVPAYPQSQQHAHQSPQCSTGASYPISQISA
KPDQTAATVPGDNSTSVGASGGSNSQPSSTNDK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccaatctgctagcatattcatgcacatatatgacaagtaacatgcgtctaatg
gattccaagtcatattactttcaatctccacataataataatacatttcaggccattaga
atgaattctaagagtgatatgcgtgtacctaaacctcccaaaccccctgaaaaaccatta
atgccatacatgcgctatagtcgaaaggtttgggagcaagttaaaaactcgaacccacat
cttaagttgtgggaagtcggaaaaattattgggcaaatgtggcgtgagcttcctgatgat
gaaaaactactgtatgtcgaagagtacgatactgagaaaacccaatacacggaattgcta
cggcagtaccatagttcaccagcatatcaggcgtggttggtggcaaaggaaagagctgag
aaaagcatggaagaacaagaccaagagcgcaggcaatcaattttaaggtcgagagaccgt
ggaaatgaacttcctcaaggtgatttaagggagtcatatatactagaagataacgaagaa
gatactgaagaccaatttaccgcgaagcatgtagcggccgctcgttttcagagaaatcat
cgtctcatgcaagaagttttaagtgatacgagactccctgatcctggtcaactaatcacc
caaagccgtcttaacactttgcgcttgcaagtagagcaactgaaaaaccataagcgcaat
ttatgtcaagagattgaagggtgtgaagcaagacatcaagccaaagtacagcgcattcgt
gaagaatctgaacgttttcgattagactatcaaaaaacaacaacagcaaggccagtcatc
actgagtctcagtttgccgatatgataattaaagcgaagtatgatatgcagcgtgaagag
gaggagcgtaagactcgttatttggcggaattagaaatcagacgcaagcgtcaacagcag
cggcagcagagagaagcggagttattggaatctgaacgcagacgtcaattactacatcag
caacagttgcagcaagttcatatgagaccgaatcaggcagtcccaccacacaacgacccg
aatattcactttggtgaccgctcattagaaagactgatagcacaggacaaaaaagaagat
acgaattcacaacccccacaaaagttgccttctgcttcagccaatttattgtgtcctgca
aatcatccgaaagcagcttcagaaattggacatgaaatcaacccaggaatgtatactgga
atgggaaatacattcacacaaccagttactcaaagttcatcgcaaaggtttcctcagtcc
ggtcatacacaacaccactatccacccccactacattatgtacccaacgccgcgacacca
gcaaatccacccgttttaattcatcagcgtagtccggtcccaaatatacaacaagcagca
caaaacaacacaggtaaaccaaatgcagtatctttaagccgtaccaagaaagttccttca
tctgcatcttctacttcatcggcctcttctgcttcatcaacatcctcaaaaaagaaaaag
gttgattcagaccttgttaaggatgctgctgtaaccacaactagtcaggatatacgggaa
cgacctatttctcggtctggcgaaggagtaatggatcagactaaacctggtgacttcggt
atgactcctggacagtccaacgaatttcagcaaggatgtacagcccagtcaaggcaactt
attacttctcaatatcaaccggtcccacctcctgctaaccccgtcgttcctgcacaaatt
tcggggggcccggtgcagacgccctactgctacgaaatcggcattgggaatccatcgaac
cccactttgtctgctggcacttattaccatcaacctgtctccgtttctaatcctgtcggc
tactctcatcctcgccctcagttttcacaacacactccctacaataccgtacagtatcat
tcagttccgccacaacaatctgcggagcatccacctcccccaccaatgtatattcagcac
atgccacaacagtctcatgttcctcagcttgtcccaccgatggtaggacccactcaacat
ccttcaagccatattccaccccagcaacacaactcaaataactggcatcatggtggtcca
ccaccttattcgccacattatggtcaaccccgctacccagttttaggtggctcagtggga
tacccaatgcagcctccgagaaatttcggtcccaattccagcggttattcaatgcctcac
tatcttgttggtcaacacggccctcaaacccacccacatcaaaatatttcatcggtacct
gtttctatccaggaaggccctgctgcttctcagccaattccggcaccaccgccgtatcaa
caacagcagcagccgaattctgtcgtcagttattggcctacacaacaacaggtgcctcca
gactatgttcagagtcaacatccatctcattacatgcccggatcccagactgaaccagtc
gtcccaaatcaacaaactctgtcatctgttgataacgtccatccgtgctctactatgtcg
gtgtcctctgcagatgttggcatgggtcaaatggtgtctaaccagtctcaaggagccaat
atttattaccaaggttgtcctgtaccaccatatacccatggtagtaatgtggggcccagt
ggattttattctgtaccaccacaacattacacgcctcatcaacacagtggtcattcttgg
tctggttattctaattctggtccttcacaagtcccagcctatccacagtcacagcaacat
gcacaccagtcgcctcaatgcagtacgggtgcttcttatcctatttcccaaatatcagca
aaaccggaccaaactgcggcaaccgttcctggggataattcaactagcgttggtgcctct
ggaggttctaatagtcaaccgtcatctacaaatgacaaatga
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