Schistosoma mansoni: Smp_156350
Help
Entry
Smp_156350 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
smm
Schistosoma mansoni
Pathway
smm04137
Mitophagy - animal
smm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Smp_156350
04137 Mitophagy - animal
Smp_156350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_156350
03029 Mitochondrial biogenesis [BR:
smm03029
]
Smp_156350
Membrane trafficking [BR:
smm04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
Smp_156350
Mitochondrial biogenesis [BR:
smm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
Smp_156350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
8355830
NCBI-ProteinID:
XP_018651194
LinkDB
All DBs
Position
3:complement(16097330..16123606)
Genome browser
AA seq
1280 aa
AA seq
DB search
MFCSHTIQKNFVELKSLVDYTNRREFGRTACHEHQSVSDKLTAQRSTKALIADTPVNCRS
VYLLRLNCSGRLVAAAHGDRSVCVYCASTGRLLLRCIGHERSPWTLTFHPTQPFLLASGC
LGGNVRLWNLEHLAALGDEKIEGTVELSSVCVWKHTGAIASLAFHPVHPILVAAWTQEVV
FYDWVSGRILSAWRFVSNHSRVRWVKFAPDGTVLYTATANPSNTESVYVHKQSDQPVVRS
PTKVVATKYPKQPSYIPVDHDGVSVTPEASCDRTVPRDALLEYLINCSDSWFQSLGICSV
CSVRLCRWAGTLGPKFPATTTDIRLGMSVAQQAAAVMAASTSSNMMPSHVQHLLNLTNPN
NRSEVYERLCRDANPAAVAIIEDMPVHEFLRSRGNYCRSPRVAISNNGVCCGGHACDLVI
THRELMRHSLCRPCLSSFWSWANKNVAWWRWSFSTNDEQSLNSASSAGSKAGSVPTPLSF
GKTNNTEKSSHIEPPVGICIQCQAKMSLQLQSSSSMLLTCNQSPVLLQGAGSEPKESDVP
SVNGKTPKSLRLMPLAALDLLRSRLSNAHEVTPVTYVATDLINDFVFSQHIKKLLVNGGV
SDLDLSHTLWDSSITIPYSQAEQIVLCVSSSPKRRKVDNQCQNKILFNQLSFDNTSILRP
VLMDSDSKDELFESKLPNTFLTCKYRLPQEASDLGAYTRDNPDNNWNYPRPATIHYTSSV
IPWMTSSIFPYVQTGASLLRSPRQLGNSLSESTAMDQISGLPNSNKAFVNDAQHVDSCET
DQCEGSNRSSMTACCRCGRIVLQTFPVDPHSNISAVVCEKLVYSENRYSTPSSQKTHDSI
IHSQCSTNQDPHTPTGHPSYQFDLSLLSSRPSGSTSLSNLSRNVDARKSETTERSVNAVL
HLIDQTGSNSVLNAMNRSITEVITGLFVDMGEYGSASSLQDVTHRICRWELSLCSPIYNT
PYLSSSGERDSARSACSPMPTNVAVSYNNNSLVVPHARLFNDSSVCLSPDGHLLAAFVIP
RETSCYTLQSSQSSALLGTLLAVYRLQPEHSRGQCLFARRFTASSPVCVDFSPLGDFLAV
GLATTRIPSEPFSTTSESSTQESLLRYGSSSSLQDHADLRQPNVKCSCQRQSSVACVFHL
QRSKTQKGEVRRSLRDIQNIKHPALLDPVSSRYLEFSNPSSEKLDRWHRLLLSAQSGISL
NTIVWNANGSILYGTTKGLIVISHGNQSSSVSILPLRCTKSHMQSVNDCEISYRRKHFIN
QAQTITSSSNISVPQSRAVI
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcagtcatactattcagaaaaactttgtggaattaaagtcgcttgtggactat
acaaatcgaagagaattcggtaggactgcatgtcacgaacatcagagcgtttcggacaag
ctcacggcacagcgatccactaaggctctaatagctgacacaccagttaattgtcgctct
gtatatctactccgactcaattgttctggccggcttgttgctgcggcacatggagaccgt
tctgtttgcgtttattgcgcttccactggtcgactactgttaagatgtattggtcatgag
agatctccttggacactaacttttcatccaacacaacccttcttgcttgcgagtggatgt
cttggtggcaatgtacggctttggaatttagagcacttggcagcacttggcgatgaaaaa
atagagggcactgtggaactgtcatctgtatgtgtttggaagcacacgggtgcaatcgca
tcccttgctttccatccagttcatcccatactagtagcggcatggactcaagaagtggtc
ttttatgactgggtatctggtcggatactttcggcatggcgatttgtgtcaaatcactca
cgcgtaaggtgggtaaaattcgcccctgatggaacagttttatacacagcaaccgccaat
ccatccaacactgagtcagtctatgtacataagcaatctgatcaaccagtggttaggagt
ccaacaaaagtagtagctaccaaataccctaagcaaccatcttatatcccagtggatcat
gatggcgtcagtgtaactcccgaagcctcatgtgatcgcacagtacctcgtgatgctctt
ttagaatatcttattaattgttctgactcctggtttcaaagtctcggtatatgttctgtt
tgttcggttcgtttatgtcggtgggctgggactctcggacctaaattcccagcaacgacg
acagatattcgccttggaatgtctgtagcacaacaagccgcagctgttatggccgccagt
acttcgtccaacatgatgccatcacatgtccaacacctactgaacctgacaaatcccaat
aatcgttctgaagtgtatgagcgtctctgtcgtgatgccaacccagctgccgtagctata
attgaagatatgccagtacatgaattcctccgctcaagaggcaactactgtcgctcccca
cgggttgcgatctcgaataatggtgtatgttgtggtggtcatgcttgtgatttggtgata
actcatcgcgagttaatgcgtcattctttatgtcgaccttgcctctcctcattttggtct
tgggctaataaaaatgttgcttggtggcggtggtctttttctacaaatgatgaacaatct
ctaaattctgcgtcaagtgctggtagtaaagcaggctctgtaccaactcctttatccttc
ggaaaaacgaataatacggaaaagtcctctcatattgaacctcctgttggcatttgcatt
cagtgtcaagctaaaatgtccttacaattacaatcatcatccagtatgttactgacatgt
aaccaatctcccgttttacttcagggagctggttctgaacctaaggaatccgatgtcccg
tcagtcaatggaaaaacccctaaatctctccgcttaatgccgcttgcagctttggatctt
ttacgctcaaggttaagtaatgctcatgaagttactccagtaacttatgtagccaccgac
ttaatcaacgactttgttttcagtcaacacatcaaaaaactgttagtcaacggcggtgtt
tccgatctcgatttatctcatacactgtgggactcaagtattactataccttacagtcag
gcggaacagatagtcttgtgtgtctcttcttcacctaagcgtcgaaaagtggataatcaa
tgtcaaaacaaaatactttttaatcaattatcttttgacaatacttcaattttaagacct
gtgctcatggattctgattcaaaagatgaattatttgaatctaaacttccgaacactttt
ctaacgtgtaaatatcgtctaccgcaggaggcctctgatttaggagcgtacacgcgcgac
aaccctgataacaactggaattatccacgtcctgccaccattcactacacttctagtgtc
ataccttggatgacatcgtcgattttcccgtacgtccagaccggtgcttctctgctaaga
tctccccgtcagcttggcaattctctttcggaatctactgctatggatcaaatctcaggg
ttaccaaattctaacaaagcctttgtaaacgatgcacagcatgtcgacagttgtgaaact
gatcagtgtgaaggatccaaccgaagttcaatgactgcgtgttgccgttgtggtcgtatt
gttcttcagacctttcccgttgatcctcattcaaatatcagtgcagtcgtctgtgaaaag
ctagtttattctgagaatcggtactcaactcctagttcccagaaaactcatgacagcatt
attcattcacaatgttcaaccaaccaagatccccatactcccacaggtcatccttcttat
cagtttgacttatcgctattaagctctcgtccgtctggttcaacgtctctatctaactta
tccagaaatgtggacgctagaaagtcagaaactactgaaagatcagtaaacgccgtgctt
catttgattgaccaaactgggagtaattctgtattaaatgcgatgaatcgtagtataact
gaagttataactggtctctttgttgacatgggtgaatatggatccgcctctagtcttcaa
gatgttacacatcgtatttgccggtgggaactgagtttatgcagtcctatctataacact
ccttatttgtcttcatctggtgaacgtgattcagcaagaagtgcgtgctcacccatgcca
accaacgttgctgtatcatataacaataatagtcttgtcgttcctcacgctcgtttgttt
aatgattcatccgtctgtctttcaccagatggacaccttcttgctgcatttgttattcct
cgggagacatcgtgctatacattacaatcatctcagtcttccgctttacttggtacactt
ctcgccgtgtatcgtctgcaaccggaacatagtcgtggtcagtgcctgttcgctcgccgc
ttcaccgcatctagtcctgtgtgtgttgatttcagtcctttaggagattttttggcagtc
gggttagcaaccacacgcataccttcagaaccattctctaccacgagtgagtcgtctacg
caagaaagtcttttaagatatggcagttcttcatcgctccaggaccatgcagacctccgt
cagccaaacgttaaatgttcgtgccaaagacaatcctctgtcgcgtgcgttttccacctt
caacgttccaaaacacagaagggtgaagttcgtcgaagcctgcgtgatattcaaaatatc
aaacatcctgcactgttggatcctgtctcgtcaagatatcttgaattttctaatccatct
tcagaaaaattagatcgttggcaccggttattactttctgctcaaagtggaatctctttg
aatactattgtttggaatgctaatggcagcattctttacggtactaccaaaggtctcatc
gtaatttcacatggaaatcaatcttcttccgtatcaattctaccacttcgctgtaccaag
tcacatatgcagtctgtgaacgactgcgaaatttcttatagaagaaaacactttataaat
caagcacaaaccattactagttcctctaacatttctgttccccagtctcgtgctgtaatt
taa
DBGET
integrated database retrieval system
