Schistosoma mansoni: Smp_157360
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Entry
Smp_157360 CDS
T01095
Name
(RefSeq) putative synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
smm
Schistosoma mansoni
Pathway
smm04120
Ubiquitin mediated proteolysis
smm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Smp_157360
04120 Ubiquitin mediated proteolysis
Smp_157360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_157360
Enzymes [BR:
smm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Smp_157360
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Smp_157360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
FAR1_N
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_Vps41
zf-C3HC4_2
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
8344716
NCBI-ProteinID:
XP_018650325
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All DBs
Position
2:complement(21484053..>21502866)
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AA seq
614 aa
AA seq
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MTLLRRLKSNFEFSQGRATCNDLQMRYALLASASLIVSSIVVTNTYYRKKQFYPTVVYLT
NNQPSLSILLFQCVVILFLVVKALTYAFFGRLQRAEVDNLVSQSWYAFFDMCLVFAFFQN
ELGVEFLFLFAILLFVRAFHWLIEERVDYMERSPVISVLFHLRTMMLITLLTLVDVYFIK
TAYWKPATHGISVHLALGIEYFILILSLLSTTVRYILHSIDSMREHSWNKKATYLLYVDI
LIGFIRLAVYVEFTFIMWSLHPFPLFIARPIYLSIRSLKKAIRDMLMSRRAIRYMNTVFR
DATPDDLASSSDTVCIICREEMNLQTDNIPSVGTSALKRLPCSHIFHFGCLRSWFQRQQT
CPTCRMDVIREARVQERQRQQPHRSVNTNNAQPDSSTTSGPSDPTATPSVAANNQNFPVP
WMPPANAFPFYPPFIPPTNNSTTTQAQTVFPSVPPLYIPPFMGMPIIYPGNLFSNGNTPM
PEPPSGLPEPADEARLRASAEARFTALRQINVLLNAAVLQMNAYLNAASSPPSESEPMTS
INTALNTDNVESNIEEKEALINDVKPQLESDGKCPLASEDSEFTEVRKRRLELFGCSSGE
ITSKSNSEPNDVSN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacactgttacgcagacttaaatctaattttgaattttctcagggtcgtgctacgtgt
aacgaccttcaaatgaggtacgctctcctagcgtcagcaagtttgattgtttcatccatc
gtcgtaaccaatacttattaccgcaaaaaacagttttaccccactgtcgtatacttaact
aataatcagccatccctttctatactcctttttcagtgtgtcgtcatactcttcttggtt
gtaaaagcactcacatatgctttcttcggtcggctccaaagagcagaagtggataatctt
gtttcacagtcatggtatgctttcttcgacatgtgcttggtttttgcattcttccagaat
gaattgggagtcgaatttcttttcttgttcgctatacttttatttgtaagagcctttcac
tggctgattgaagaaagggtcgattatatggaaagatcacctgtcattagtgttctgttt
caccttcgaacaatgatgcttattactcttctaacccttgtggatgtatatttcatcaaa
acagcctactggaagcccgctacacacggaatatccgtacatttggctttggggatagag
tatttcatcttaatattgagtcttctatcgactactgtacgttatattttacattcgatt
gactctatgcgagaacattcctggaataagaaagctacatatctcttatatgtagatatt
ctcattggatttattcgtttggctgtgtatgttgaatttacgttcatcatgtggtcactg
cacccatttcctttgtttatcgcgcgacctatctatcttagtatcagatcactaaaaaag
gcgattcgagatatgttgatgtcacgtcgtgctattcgatacatgaacacagttttccgt
gatgccactccagatgatttggcttcctcctcagatactgtttgcataatctgtcgtgaa
gaaatgaatcttcaaacagataatataccatcggttgggacttcagctctcaaaaggtta
ccttgttctcacattttccattttggttgtttacgttcatggttccaacgtcaacagact
tgtccaacctgtcgaatggatgtcattcgagaagctagagttcaagaaagacagcgacag
caacctcatcgttcagtaaacactaataatgcacaaccagatagctcaacaacttctggt
ccatctgatccaactgcaacaccgtctgttgctgctaataatcaaaacttcccagtgcca
tggatgcctcctgcaaatgcatttccgttttacccaccatttattcctcctacaaataat
tcaacaactacacaagctcagactgtctttccgtctgtgcctcctttatacataccaccc
tttatgggcatgcctataatataccctggtaacttgttttctaatggaaatactcctatg
ccagaacctccctctggactacctgaaccagctgatgaggctcgtcttcgtgccagtgcc
gaagcccgtttcaccgctttacgtcaaataaatgtactgttgaatgcagctgtcctgcaa
atgaatgcttacctaaatgcggctagctctcccccaagtgaatcagaacctatgacttct
attaatactgccctcaacaccgacaatgtggaatcaaatattgaagaaaaggaagcctta
attaatgatgtaaaacctcagttagagtccgatggtaaatgtccccttgcatctgaagat
tcggaatttacggaagttcgtaaacgtagactagaactttttggatgctcatctggagaa
atcacttcaaagtctaactctgaacctaatgatgtgtccaattga
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