KEGG   Schistosoma mansoni: Smp_157360
Entry
Smp_157360        CDS       T01095                                 
Name
(RefSeq) putative synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
smm  Schistosoma mansoni
Pathway
smm04120  Ubiquitin mediated proteolysis
smm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Smp_157360
   04120 Ubiquitin mediated proteolysis
    Smp_157360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smm04121]
    Smp_157360
Enzymes [BR:smm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Smp_157360
Ubiquitin system [BR:smm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    Smp_157360
SSDB
Motif
Pfam: TPR_SYVN1_N zf-RING_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-RING_16 zf-ANAPC11 zf-RING_11 zf-C3HC4_3 FAR1_N zf_RING_Vps8_fungal zf-RING_5 zf-RING_Vps41 zf-C3HC4_2 zf-RING-like
Other DBs
NCBI-GeneID: 8344716
NCBI-ProteinID: XP_018650325
LinkDB
Position
2:complement(21484053..>21502866)
AA seq 614 aa
MTLLRRLKSNFEFSQGRATCNDLQMRYALLASASLIVSSIVVTNTYYRKKQFYPTVVYLT
NNQPSLSILLFQCVVILFLVVKALTYAFFGRLQRAEVDNLVSQSWYAFFDMCLVFAFFQN
ELGVEFLFLFAILLFVRAFHWLIEERVDYMERSPVISVLFHLRTMMLITLLTLVDVYFIK
TAYWKPATHGISVHLALGIEYFILILSLLSTTVRYILHSIDSMREHSWNKKATYLLYVDI
LIGFIRLAVYVEFTFIMWSLHPFPLFIARPIYLSIRSLKKAIRDMLMSRRAIRYMNTVFR
DATPDDLASSSDTVCIICREEMNLQTDNIPSVGTSALKRLPCSHIFHFGCLRSWFQRQQT
CPTCRMDVIREARVQERQRQQPHRSVNTNNAQPDSSTTSGPSDPTATPSVAANNQNFPVP
WMPPANAFPFYPPFIPPTNNSTTTQAQTVFPSVPPLYIPPFMGMPIIYPGNLFSNGNTPM
PEPPSGLPEPADEARLRASAEARFTALRQINVLLNAAVLQMNAYLNAASSPPSESEPMTS
INTALNTDNVESNIEEKEALINDVKPQLESDGKCPLASEDSEFTEVRKRRLELFGCSSGE
ITSKSNSEPNDVSN
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgacactgttacgcagacttaaatctaattttgaattttctcagggtcgtgctacgtgt
aacgaccttcaaatgaggtacgctctcctagcgtcagcaagtttgattgtttcatccatc
gtcgtaaccaatacttattaccgcaaaaaacagttttaccccactgtcgtatacttaact
aataatcagccatccctttctatactcctttttcagtgtgtcgtcatactcttcttggtt
gtaaaagcactcacatatgctttcttcggtcggctccaaagagcagaagtggataatctt
gtttcacagtcatggtatgctttcttcgacatgtgcttggtttttgcattcttccagaat
gaattgggagtcgaatttcttttcttgttcgctatacttttatttgtaagagcctttcac
tggctgattgaagaaagggtcgattatatggaaagatcacctgtcattagtgttctgttt
caccttcgaacaatgatgcttattactcttctaacccttgtggatgtatatttcatcaaa
acagcctactggaagcccgctacacacggaatatccgtacatttggctttggggatagag
tatttcatcttaatattgagtcttctatcgactactgtacgttatattttacattcgatt
gactctatgcgagaacattcctggaataagaaagctacatatctcttatatgtagatatt
ctcattggatttattcgtttggctgtgtatgttgaatttacgttcatcatgtggtcactg
cacccatttcctttgtttatcgcgcgacctatctatcttagtatcagatcactaaaaaag
gcgattcgagatatgttgatgtcacgtcgtgctattcgatacatgaacacagttttccgt
gatgccactccagatgatttggcttcctcctcagatactgtttgcataatctgtcgtgaa
gaaatgaatcttcaaacagataatataccatcggttgggacttcagctctcaaaaggtta
ccttgttctcacattttccattttggttgtttacgttcatggttccaacgtcaacagact
tgtccaacctgtcgaatggatgtcattcgagaagctagagttcaagaaagacagcgacag
caacctcatcgttcagtaaacactaataatgcacaaccagatagctcaacaacttctggt
ccatctgatccaactgcaacaccgtctgttgctgctaataatcaaaacttcccagtgcca
tggatgcctcctgcaaatgcatttccgttttacccaccatttattcctcctacaaataat
tcaacaactacacaagctcagactgtctttccgtctgtgcctcctttatacataccaccc
tttatgggcatgcctataatataccctggtaacttgttttctaatggaaatactcctatg
ccagaacctccctctggactacctgaaccagctgatgaggctcgtcttcgtgccagtgcc
gaagcccgtttcaccgctttacgtcaaataaatgtactgttgaatgcagctgtcctgcaa
atgaatgcttacctaaatgcggctagctctcccccaagtgaatcagaacctatgacttct
attaatactgccctcaacaccgacaatgtggaatcaaatattgaagaaaaggaagcctta
attaatgatgtaaaacctcagttagagtccgatggtaaatgtccccttgcatctgaagat
tcggaatttacggaagttcgtaaacgtagactagaactttttggatgctcatctggagaa
atcacttcaaagtctaactctgaacctaatgatgtgtccaattga

DBGET integrated database retrieval system