Schistosoma mansoni: Smp_157800
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Entry
Smp_157800 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_157800
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_157800
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_157800
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Pre-60S particles
Helicases
Smp_157800
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
Smp_157800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
8343139
NCBI-ProteinID:
XP_018654907
LinkDB
All DBs
Position
W:<34355089..34365815
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AA seq
710 aa
AA seq
DB search
MEQEVKRIQLNKYSKTISGTIGYNNNNCFYYSNRVLIETGRSLQICAKFVVREQSKRKLI
FHSLSFYAPSCNLETRSQSRGDFLKSHMVVLKVSPGDFSNFNIADVIIEKLRARNISELF
PVQFKTYDIISSGRDAVVLARTGTGKTLAFSLPLVNSLIKGQGSRPSSPVVLVLAPTREL
VTQIATDFESISVHGIKVTSVYGGVPYRPQCDALRQGTHIVVGAPGRVIDLMEKGVLKLS
SVRHVVLDEVDRMLDMGFSKDVESILSKIYNSENSEKPQTLLFSATMPSWVSEISRCYLS
DDALHLSLIDEQETKTSTNVTHLALLCPYESRAATLSDVIKVYCKGRESRCIVFCERKKD
ADELSASDAMSGDCHVLHGSVPQDKRELVLQRFRDGKYRTLLTTNVAARGLDVPNVDLVI
QCHPPRDIEDYIHRSGRTGRADRSGTSICFYTYKERSMLSRIENMAGITFRRISAPTIND
ITTAWGEEILKTFSNVPKSTWSTFVPLALSIANQLAQNSKTGKVKKDSCDDLGVDDDKTP
GRKPKSKDILRVLCCALACLSGKEGAFESRSALTAQIGKTAYKLELNFIARSKGLAFATL
RNHLPENIVNSVHSLSFIRGKMGYVFDLPSEHDEFVKSTWPNDAQAKLSLLSKIPELEEE
EFFNQGRSGNYGSWQSRFNGGSRQSFKRSYNSGTFNSSFRSSKSFKFDNS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaagtgaaacggatacagttaaacaaatacagtaaaacaatctctggtaca
attggttacaataataataattgtttctattattccaatcgtgttcttatcgagactggc
cggtcactacagatctgtgcaaaattcgtggtcagggagcagagtaagagaaagcttata
tttcactcattatcattctatgctcctagctgtaaccttgaaacgaggtcgcagagcaga
ggggactttttaaaatcgcacatggttgtccttaaagtatcacccggagacttctcgaac
tttaatatagctgatgtgattatcgagaagcttcgtgcccgaaatatttctgaactattt
cccgtgcaattcaaaacatacgacatcatatcatcggggagagatgcagttgtgttagcg
agaaccgggacgggaaaaaccttagcattttccttaccactggtcaattcgcttataaaa
ggacagggatctcgtccttctagtcctgtggtccttgtactggctccaacacgagaacta
gtgacccaaattgctacagatttcgagtccatttctgttcatggcattaaagtgacttca
gtttacggaggagtcccttatagaccacaatgtgacgcccttcgtcagggcactcatatt
gtagttggtgctcctggccgagttattgatttgatggaaaaaggtgttttaaagttgtca
agcgttcgtcatgttgtcctagatgaggtggatcgtatgctggatatgggtttcagtaaa
gatgtggaaagtattttgtcaaaaatatataacagcgaaaattctgaaaaacctcagact
cttcttttctccgctacaatgccttcatgggtttcagagatatcaagatgttatctttca
gatgatgccttacacttatctttaatagatgaacaagaaacgaaaacttccaccaatgtt
acacatttagctcttttgtgcccttatgaatcacgtgcagctacgttatcagatgtcata
aaagtttattgcaagggtcgagagtcgagatgcattgtgttttgtgaacgcaaaaaggac
gcagacgagttatctgcaagtgatgctatgtcaggtgattgtcatgttcttcatggaagt
gttccacaagacaaacgagagttagttcttcaaagattccgtgacggtaaatacaggacg
ctgctgacaactaacgtggctgctcgtggtctagatgttccaaacgtagatttagttata
cagtgccatcctccacgggatattgaagactatattcaccgttcaggtcgaactggtcga
gccgatcgaagtggtacttccatctgtttttatacttacaaggaacgtagtatgctttcc
aggattgaaaacatggcgggtataacatttcgccgcatatctgcacctactattaacgac
ataactactgcttggggtgaagaaattttaaaaacattctccaatgtgcccaaatctact
tggtccacgtttgtacctttggccttatccattgcaaaccagcttgcacaaaactcaaaa
actgggaaagtgaaaaaagattcttgtgacgacttaggggttgatgatgataagacacct
ggtcgtaagcctaaatctaaagacatacttcgtgttctttgttgtgcattagcttgccta
agtggcaaagaaggtgcatttgaaagtcgctcagcgctcacggcacagataggtaaaaca
gcctataagcttgagttgaattttattgcacgaagcaagggactagccttcgctacatta
cgaaaccacttaccggaaaacattgtgaacagtgttcatagtctaagtttcattcgtggg
aaaatgggatacgtgttcgatctgccttcagagcatgatgaatttgtaaagtcgacatgg
ccaaatgatgcacaagctaaactatcactactttctaaaatcccagaattagaagaggaa
gaatttttcaatcaaggtcgttcaggaaattatggatcttggcagagtcgatttaacggc
ggttcgagacagtcatttaaacgttcttataatagtggtactttcaatagttcattcaga
agttcaaagtcctttaaatttgataacagttga
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