Schistosoma mansoni: Smp_158140
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Entry
Smp_158140 CDS
T01095
Name
(RefSeq) putative prokaryotic DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smm
Schistosoma mansoni
Pathway
smm03440
Homologous recombination
smm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smp_158140
03460 Fanconi anemia pathway
Smp_158140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smm03032
]
Smp_158140
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_158140
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Smp_158140
DNA replication proteins [BR:
smm03032
]
Eukaryotic type
DNA Topoisomerases
Smp_158140
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
Smp_158140
FA (Fanconi anemia) pathway
Smp_158140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
8351776
NCBI-ProteinID:
XP_018653105
LinkDB
All DBs
Position
6:complement(7317161..7348126)
Genome browser
AA seq
1058 aa
AA seq
DB search
MISKCLRLLLIISDFPTASGVRRFTMKILNVAEKNDAAKNISEILSRGGYHRREGISKFN
KIYEFPMNLNGQNVMMVMTSVSGHLTNYDFLPNYKSWHSCNPMVLFDAPIVKQVLKDYEP
IKQTLQREVRSCQKLIIWTDCDREGENIGVEVIDVCREIKPNIEILRARFSEITPAAVHR
AVDRLTIPDYNASTAVDVRQELDLRIGAAFTRFQTLRLRRVFPQALSDQLISYGSCQFPT
LGFVVERFREVDQFVSEPFWRIVVTVSRDEKTTEFQWQRGRLFDQDCCRAYYEHLNQNRY
GQIVEVIKRPKTKWRPTALDTVELEKLASRKLQMGAKYAMQLAERLYNKGFISYPRTETK
IFPPDLDLKSLVHVQINDSRWSDFATRILERGPNPKNGKSSDKAHPPIHPLKVGDSLQGD
EARLYELVTRHFLACLSTDAEGAETIVRLCIDGELFESKGLMILALNYLEVYIYDRWAEK
DMPVFQLGEWILPDNIQVLTGQTCPPPLLTEADLISLMDRHGIGTDATHAEHIETIKQRL
YVGLEQNKFLVPGQLGMGLVEGYDSMGFEMSKPNLRSEFEADLKLICEGRKTKEEVLHHH
LNKYKELFRLALNQASFLDRALALRLEQEAENVQNISGSVGEMASFAASNNTIDGHNQSN
VLNPVVAFCPTCHSGLVLRQKRSALRPLTTSSNLSNNSGSNEVNQTSNGGWFLSCSGYPN
CRYAIWFPDSVIHVRVLSETNENTCNRCADFIPSSSVRPSNDQLRPLKLGLRFRRNFYLP
NGYIQDDDTKESVDNAEAGDSDNILCNCGHSAIQLTVKKPGPNQGRLFYRCPGLAGNSCD
FFLWKSQTTPITIAQSSPLYSSTQVSLRNVIDPCSRLENVSEIANCVSDRTSGLGSSDSN
SACVICRCGEPAKLLVVNKQSSNKGRHFYACPNSRPNVDGGPASGCNFFQWADHIDPASG
QSDSSSYGLSNRRYASGSSIEQGLSYHRTAANAETNISVGHVPSWPPPASNNSRGAISRN
KNRDFKDRSLSASSSVTRCCGLCRQPGHTRNRCPHSTT
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaagtgcctgcgcttgctgttgattatcagtgatttccccacagcgtccggc
gttcgtagattcacgatgaagattctgaatgttgctgagaagaatgatgccgctaagaat
atttcggaaatcctgagccgcggaggataccataggagagaaggaatatcgaagttcaac
aaaatatacgagttccctatgaatctcaacggccaaaatgttatgatggtaatgacgtct
gtgtcaggccacctgactaattatgatttcctcccaaattacaagtcatggcattcttgt
aacccaatggtgctctttgacgcaccaattgttaaacaagttctcaaagattacgagcca
atcaagcaaacgttacagcgtgaagtacgaagctgtcaaaagttaattatatggactgat
tgcgatcgtgagggtgaaaacattggcgtcgaagtaattgatgtttgtagagaaatcaaa
ccaaacattgaaattctccgtgctcggttttctgaaattacacctgcagctgtgcatcgt
gccgtagatcggcttacaattcctgattataatgccagcacagctgttgacgtgcgccag
gagctagatttacgtattggggctgccttcacacgcttccagactttgcggttgaggcga
gttttcccccaagctcttagtgaccagttgatctcgtatggatcttgtcagtttccaact
cttggttttgttgtagaacgctttcgagaggttgatcagtttgtttctgaaccattttgg
cgtattgtggtcactgtgtcacgcgacgagaaaacaactgaatttcagtggcaacgtgga
cgtcttttcgatcaagattgttgcagagcatactatgaacatttaaatcaaaatcgctat
ggtcaaattgtagaagttattaagcgtccgaaaaccaaatggcgtccaactgctttggat
acagtagaattggagaaattggcctctcgcaagttacaaatgggagctaaatatgcaatg
cagttggctgagcgtctttataacaaaggctttatttcatatcctcgtacagaaactaaa
atattcccgccggatttggatcttaaaagcctagtgcacgttcaaataaatgattctcga
tggtctgattttgctaccagaatccttgagcgtggtcctaatcctaagaacggaaagtca
agtgataaggctcatccacctatacacccgttaaaagtgggcgattcacttcagggtgat
gaagcacgtctttatgaattggtgactaggcattttctagcttgcctttcaaccgatgca
gagggtgctgaaaccatagttcgtttgtgtattgatggggaattatttgaatccaaaggt
cttatgattttggctctgaactatttagaagtttacatctatgatcggtgggctgaaaaa
gatatgcctgtttttcaattaggtgaatggattttacctgataatatccaagtacttact
ggtcaaacatgtccaccacctttgctcacagaagctgatcttatttctcttatggatcgt
catgggatcggcacagacgctacacatgctgaacatattgaaaccattaaacaaagactc
tatgtcggtttagagcaaaacaaatttcttgttccaggtcaattaggaatgggattagtg
gaaggttacgattccatgggttttgaaatgtctaaacctaatttacgatcggaatttgaa
gctgatctaaagttaatatgtgaaggtcgaaaaacaaaagaagaagtattacatcatcat
ttgaacaagtacaaagaattatttcgtttagctctaaaccaagcgtcattcctagacagg
gcattagctcttcgattggaacaagaagcagaaaatgttcaaaatatatctggtagtgtt
ggtgagatggcctcatttgctgctagcaataacaccattgatggacataatcaaagcaac
gttttaaacccggttgttgcattttgccctacttgtcattctggtctagtacttcgtcaa
aaacggagtgctttacgcccgttaacaactagttcaaatctttcaaataattctggttca
aatgaagttaatcagacaagtaacggtggctggtttctctcatgttctggctatcctaat
tgtcgatatgcaatttggtttccagattcagtcattcatgttcgtgttttgtctgaaacg
aatgaaaatacgtgcaatcgttgtgcagacttcataccttcttcatcggtacgtccttct
aatgatcagttgaggccgttgaaattaggcttacgttttcgacgcaatttttacttgcca
aacggttacattcaggatgatgatactaaagaatctgtcgacaacgcagaggctggtgat
tcagacaatattttgtgcaattgtggccattcagctattcaattgactgtcaagaaacca
ggcccaaatcaaggtcgattgttttatcgttgtcctggactagcaggtaattcatgtgat
ttctttttatggaaatcccaaacaactccaataactattgctcaatctagtcctttgtat
tctagtactcaagtgtcattacggaatgtcatcgacccgtgctctcgtcttgaaaatgta
tctgagattgctaattgtgtcagtgatagaacatctggtttaggttcctcagactctaat
tcagcttgtgttatttgtcgttgcggagagcctgcaaaattacttgttgtcaataaacag
tcgtctaacaaaggtcgtcatttttacgcatgtccaaacagtcgtcctaatgtcgatggt
ggtccagcatctggatgtaatttttttcagtgggcagatcacattgatccagcatcagga
cagtcggattcatcctcatatgggctttcaaacagacgatatgcatctggatcaagtatt
gaacaaggacttagttatcatagaacagcagcgaatgctgaaacaaatatctctgtcggt
catgtcccatcatggcctcctccagcttcgaataactcaagaggtgcaatttctaggaat
aaaaatcgtgactttaaagaccgtagtttatctgcgtcatccagtgtaactagatgttgt
gggttgtgccgacagcctggtcatacacggaaccgttgccctcattcaacaacatga
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