Schistosoma mansoni: Smp_159690
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Entry
Smp_159690 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K14304
nuclear pore complex protein Nup85
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_159690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_159690
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_159690
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_159690
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Smp_159690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
8347446
NCBI-ProteinID:
XP_018651898
LinkDB
All DBs
Position
4:complement(10449133..10459089)
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AA seq
644 aa
AA seq
DB search
MTEVLSKVSPPGYLAFNLCSWFYVQSQEAANCAREILDSASREQSGHILLHDKLNNLKSW
ETNKDFWPTVLSLVLQARCQEAASLLVLHSNSNGRGLRSLRMWTEYGAQFSQAWNYWQSE
CEHRLSSGEFDHVGGDPTSVEYIKLIVNILSGRTSIWDDLRISDVTRGSRGWFFRFVSFV
FYTDQLVNIDSLSSDLDQWLALTKKGNMEPGSNFDQSVDALITSIFHVDLFSFVRIASEK
LSNWWFIAHFTNLLNHIYPGVLNDLQLTHKQDELSLESCPKTVNYISKAEVNESLYQPVD
SSSLVEFFLLGYIESLASETSLLSIALGYLDHCKSGRTRQSALLLRHAVPVSTRATNWFI
SQAKVRGLYSTAEELAKLNCRRFACLSLQSQGGSIIDSSNYSPICISVGWALMARDYSMI
NRLAELSLARDNGFMRKETLNETTISHASTEVAELAAIILGFCRGSSYDEPSNNNKVNEV
NHLQLSPELAFLIRYAELQQSFNDGDCEGAVDRIIDLLVTSPGNSLITTNSAGQDYTSSS
TTGLGLRIPTRLKIRLLAEVRHLLGRNCLRRDQVEVLITALIELRADLDLNPNNMSTNSD
MHSLLTKIHVSLAKELASTFFATSDTISISPSLSPNSMVDTNWH
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtgttatctaaagtatctccacctggatatttagcattcaatctctgtagt
tggttttatgtacagtcccaggaagcggctaattgcgctcgagagattttggatagtgca
agcagagagcaatccggtcatattttattacatgataaactgaataatcttaaatcatgg
gaaaccaacaaggacttttggccaacagttttaagcttggttttacaagctaggtgtcag
gaagcagcaagtttgcttgtcctgcattctaattctaacggtcgtggtctccgaagtcta
cgtatgtggactgagtatggtgctcagttttcgcaggcgtggaattactggcagtcagag
tgtgaacatcgactgtcttcaggagaattcgatcatgttggtggggatccaacatcagtt
gaatacataaaattaattgtaaatatcttatcggggcgcacgtctatttgggacgacctg
cgaatttcggacgtaaccagaggttcacgtggatggttttttcgttttgtatcatttgtt
ttctacactgaccagttggtaaatattgatagtttaagcagtgatcttgaccaatggctt
gctttaacaaagaaaggtaatatggaaccgggctctaactttgatcagtccgtcgatgct
ttaatcacaagcatttttcacgtggatctattctcatttgttcgtatagcaagtgaaaaa
ttaagtaattggtggtttattgcacattttacaaatcttttaaaccacatatatcctggt
gtacttaatgaccttcagcttacacataaacaagacgagttgtctttagaatcttgtcca
aaaacagtaaattatatatctaaggctgaggttaatgaatcgttgtatcaacctgtagac
agctcttcattagttgaattttttcttcttggttatatcgaatcattggcttctgaaact
agtcttttgtctattgcacttggatatttggatcattgtaaatctgggcgtactcgtcaa
tctgccttattattgagacatgctgttccagtttcaactagagctacaaactggtttatt
agtcaagccaaagttagaggattatattcaactgctgaagaactagccaaattaaattgt
cgtagatttgcatgtttatcattgcaatctcaaggaggttctataattgattcatcaaat
tattctccaatttgtatctctgtaggttgggctctaatggcacgtgattattctatgatt
aatcgattagctgagctctctcttgctagagataatgggtttatgcgtaaggaaactttg
aatgaaacaacaatttcacatgcgtctacggaagttgcagaattggctgctataatatta
ggcttttgtcgaggatcatcatatgacgaaccatctaataataacaaagttaatgaagtg
aatcatcttcaattatcacctgaattagcttttttaattcgttatgctgaacttcaacaa
agttttaatgatggtgattgtgaaggcgcagttgaccgaattattgatctactggttact
agtcctggcaattcacttattaccaccaattcagctggacaagattatacaagttcttcg
actacaggtcttggtttacgtataccaactcgtcttaaaataagacttcttgctgaagta
agacatttattgggtcgaaattgtctacgacgagatcaagttgaagtacttattactgct
ttgattgaattaagagcagatttagatttaaatcctaataacatgtccacaaatagtgat
atgcattcattactaacaaaaattcatgtgtcccttgctaaagaactagcatcgacattc
tttgctacctctgatactatttctatatctccgtctttatcacccaatagtatggtcgat
acaaattggcattaa
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