Schistosoma mansoni: Smp_160090.1
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Entry
Smp_160090.1 CDS
T01095
Name
(RefSeq) putative rnase h (70)
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
smm
Schistosoma mansoni
Pathway
smm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smp_160090.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_160090.1
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Pre-60S particles
RNases
Smp_160090.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ARTD15_N
Motif
Other DBs
NCBI-GeneID:
8346497
NCBI-ProteinID:
XP_018652667
UniProt:
A0A3Q0KRI3
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Position
5:complement(3240147..3268363)
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AA seq
710 aa
AA seq
DB search
MDFRELNKIKKENKKKPILVIKDRKTVLSALDIQKLLGLTIFPQHFVKWPDWCSITKPSF
IKNIVLIFINRVNTVKSNEKYGQQFALMFGEPLKVLSPEAYKYTWDREISTVPRSFLTAH
AAAMADLNKSILTPVPRRTWVNDEKTIDKMRIIKSVHEITKEQLPSQTITTTTTIEPVEK
RTPKRKADTLFPLPIPGTPDAFDRTLLVLNVEQMKKENVPLPNEFLVDQRKHFKNRSDFV
PTKPVYLPVSANSPMYAVDCEMVLTSVGSELARVTMIDEKATVMFDRLVKPPNPVKDYLT
KFSGITRDMLALIDTTLEDIQRELAETLPGDAILVGHSIGNDLEAMKVFHPYVIDTSVIY
NLKGNRAAKTRLRFLSEHFLGRMIQTGKGGHSSAEDAIATMDLVRLKLSQDLGFGDVTTS
WRFPEDYQSPIEAKSARFTALTSDKQNSNIYGNLQENNNTTTTITTNNNQLISSICNDLL
TESQYFESHPVFQEHLLKLCSFYKSLGKPIHLFNRLLHDSGITYAYWPICQEENDEEQRQ
QREEQDREKESVQHIITNSEHRDIFIPIDFNSNDHQTTTTDNVNTTTTTTTNSDEPTTTL
AVVNKISKKLSNYIVDLCDSHRLVMIQANCSPEWDKAKCYHKVSKFCTKLYSTLKENSLI
GVICKGSDFQKPLSKKRTHANILKSAACNFYITLNSNVVIQTPTSDNGSI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggattttcgcgagttgaacaaaatcaagaaagaaaacaaaaagaagcccatacttgta
atcaaagatcgaaaaactgttctatcggctttggatattcagaagttgttgggcttgacg
attttccctcagcatttcgttaaatggcctgattggtgttctatcaccaagccctcgttt
atcaagaatattgttctgatattcattaacagagtaaatactgtgaaatcgaacgagaaa
tacgggcaacagtttgctctgatgtttggggagccattgaaagtattaagtccagaagcc
tataagtatacatgggacagagaaatttctactgtccccagaagtttcctcacagctcac
gcagcagctatggcggatttaaataagtcaatactaactcctgttccccgtcgcacgtgg
gtaaatgatgaaaaaactatagataaaatgcgtataatcaaatcagttcacgaaataact
aaagaacagttaccttcacagactattactactacgactactattgaaccggtagaaaaa
cgcactcctaaaagaaaagctgatacactttttccattacccataccaggtacaccagat
gcattcgatagaactttactggttttaaacgttgagcaaatgaaaaaagaaaatgttccg
ttacctaatgaattcttagtcgatcaacgtaaacacttcaaaaatcgttcagattttgta
ccgactaaacctgtataccttcctgtatcagccaacagtccaatgtatgcagtagactgt
gaaatggtacttacatccgtaggaagtgagttggctcgagtgactatgattgatgagaaa
gcaacagttatgttcgatcgcttagtgaaaccgccaaatcctgttaaagattatttaact
aaattcagtggaattactagagatatgcttgcactaatagacactacactggaagatata
cagcgtgaattagctgaaacgttaccaggagatgccatcttagttggtcattcaattgga
aatgatttagaagccatgaaggtttttcatccgtatgtaattgatacaagtgtcatctat
aatctgaaaggcaatagagcggctaaaacacgtcttcgatttctatcagaacactttctt
ggacgaatgattcaaactggtaaagggggtcattcttccgctgaagatgctattgctaca
atggatcttgtgcgattaaaattaagtcaagatcttggctttggtgatgtgactacatct
tggcgttttccagaagattatcaatcgccaatagaagctaagtctgctagatttactgca
ttgacaagtgataaacaaaactcaaacatctatggtaatttacaggaaaacaacaatact
actactactattactaccaacaataaccaattaatttcatcaatatgtaacgatttatta
acagaaagtcaatattttgaaagtcatccagtttttcaagaacatctattaaaattatgt
tcattttataaatctttgggtaaaccaattcacttatttaatcgtttactacatgattcc
ggtattacttatgcttattggccaatttgtcaagaagaaaacgacgaagaacaacgacag
caaagagaagaacaagatagagaaaaggaatcagttcagcatattattaccaattcagaa
catagagatattttcatacctatagattttaattcaaatgatcatcaaacgactactact
gataatgtaaacacgactactactactactaccaatagtgatgaacctacgacaacatta
gcagtagtcaataagatttcgaaaaaattatcaaattacatcgttgatttgtgtgattca
catagattagtaatgatacaggcgaactgttcacccgaatgggataaagcaaaatgctac
cataaagtatccaaattctgtacaaaattatattcaactttaaaagaaaatagtttaatt
ggtgttatttgtaaaggttccgattttcaaaaaccattgtctaaaaaacgtacacatgca
aatattttaaaatcagctgcatgcaatttttatataacactcaattcgaatgttgttatt
caaactcccactagtgataatggttccatatga
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