KEGG   Schistosoma mansoni: Smp_160680
Entry
Smp_160680        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K08775  breast cancer 2 susceptibility protein
Organism
smm  Schistosoma mansoni
Pathway
smm03440  Homologous recombination
smm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Smp_160680
   03460 Fanconi anemia pathway
    Smp_160680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smm04121]
    Smp_160680
   03036 Chromosome and associated proteins [BR:smm03036]
    Smp_160680
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_160680
Ubiquitin system [BR:smm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    Smp_160680
Chromosome and associated proteins [BR:smm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     Smp_160680
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     Smp_160680
   FA (Fanconi anemia) pathway
    Downstream FA components
     Smp_160680
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA-2_helical BRCA2DBD_OB2 BRCA-2_OB3
Other DBs
NCBI-GeneID: 8341357
NCBI-ProteinID: XP_018652069
LinkDB
Position
4:16153452..16183591
AA seq 1608 aa
MDFEMNLGASLIRPLFNMGDDCYVGLAGDGPYSPCISPDVNESSRPQELSVYPKLINFVY
PSEDEMKADYDTVYIMASTSVNKRVDSPSQDFDDSFTGFDLTQIMNVSEIASYKSVDFSI
DSHFTGIKTGRGDSVTLKDVSSRKFAKTLVDSSNVCDDDVDVEKSHDNHDSHFTGFKTGR
GDSVTLKDVSSRKFAKTLVDSSNVCDDDVDVEKSHDNHDSRFTGFKTGRGDFVTLKDVSS
RKFAKTLVDSSNVCDDDVDVEKSHDNHDSHFTGFKTGRGDSVTLKDVSSRKFAKTLVDSS
NVCDDDVDVEKSHDNHDSHFTGFKTGRGDSVTLKDVSSRKFTKTLADPYVSGYDFVKIEN
CCQSYNCNPHNLKDNLSLCVYSGEKQIGEVHDDFWEASHIYIDSFRGCFDTQFDLSFERS
EGDTHMMEINVSLEVEREKARADQQNLIAHNQSIPSPNQHVLSTSDISLNTTLYGLLWNI
RRRYYGTEILNSTNNQSLLKWKLLLADNVNNQKLSVSSTPLHLPKYLKLLNDTYNKWSLQ
TADKLYWLLDMKYIMHTKSESNLPISYKFHYFVLIPDKFGCVGKQEIINSFLSCRKICPN
LITRGWIENHYLQIMWKIGTIALLYSDLCSTLLCDYCAPIHVLNELHYRYDREIETCQRP
ALRKVIEQDDTPARRLILCVSRIDIFDQCVKKACLTDGWYQIAWHPDPMLTTLITSGKIR
VGSKLVTAGAELIVTNPSSTKSQPKGKCSSGDDQIDEFKHLYGDDGVAVGMALKLHGNST
RPVSWCSRLGFTTKQPSSGAGLYPVPLCTLSSDGGICSSIRVVIQRRYSLQYMETLEVPE
QNSTTSTLLIRANSGSDELSSKLRLNRRRIFRSERAEEAEVRLYEARRLRVIDRALDRLV
INDSSKRRIQPTHEQLVALGNDGEALLQAILNAPDSMEAESNLTQVQRDAIQHYKESIIH
DAIVENVPPRQITPLLRLRVSGIHPRDIASGYSASITLWNPTDEMLSLLKEGEVVEFYRL
QVSATRANDPFASPSTLPGFVKPIGVNIPSGFVLSLSGGRTTRILSLGHISNLKGIVSTD
NISRVYHPRVKLSVSEAYQTIIQEDQSSTSSLNRGNREIDLCCLIIAIYHTPMHSNQSSK
SYPPDVKQQMDHPRTIDTPFKYPSSDVDCVYAVDVNCKSETCLSVIKFWDGLQALHLMDI
VQIGRVLCFNDLQLRHCQTINTTSKLNNQPSRTIPLITLHYTSASNVTVEKPVARRSSRI
ASTNESDPTVVSCLQQVLKDFLSSKSGCEIDLQISNSPLNHSKSLTPASNTSHSTGVGLS
SLLRGSIGRVQSTPVHTTIETAKISTSLENSSSILNITCPSPTESMLKQGLPLKEQDFTP
IKRFVSTTTTDCEQSLNNNTPKTVTCPYTRTLPNRSASRTGLSRKTRVRSSIPGLKNSSI
TVSDKSISHEIKQSEVVDIAKSPTPDIIHSLLITEEPCFTPEPKAKRPRSSQRSNQCDNS
LELCNNKEILECIQSPKDILNSSVEEKEIISSSDAFRLKTPPYNSEIFTNSQLTNDSFDN
SDMSIADLVKTRQRRQSRSSQHITTTSPTQHSTPIISKHRLSLKRTSK
NT seq 4827 nt   +upstreamnt  +downstreamnt
atggatttcgaaatgaatctaggtgcctccttaatcagacccttgttcaatatgggagat
gattgctatgtgggccttgcaggtgatggaccctatagtccctgcatcagccctgatgtc
aatgaatcttctagaccacaggagttatcagtatacccgaagttaattaactttgtctat
ccttcagaagacgaaatgaaagcagattacgatacagtatatataatggcttctacgtct
gtgaacaaacgagtagattctcctagtcaagactttgatgatagttttactggttttgat
ctaactcaaattatgaatgtttccgaaatcgctagttataaaagtgttgactttagtata
gattcacatttcacaggtatcaagacaggtagaggagattctgtgactttgaaagatgta
tcctctcggaagtttgccaaaacacttgtggactcgtcgaacgtttgtgatgatgatgtg
gatgtggagaagagtcacgataatcacgattcacatttcactggtttcaagacaggtaga
ggagattctgtgactttgaaagatgtatcctctcggaagtttgccaaaacacttgtggac
tcgtcgaacgtttgtgatgatgatgtggatgtggagaagagtcacgataatcacgattca
cgtttcactggtttcaagacaggtagaggagattttgtgactttgaaagatgtatcctct
cggaagtttgccaaaacacttgtggactcgtcgaacgtttgtgatgatgatgtggatgtg
gagaagagtcacgataatcacgattcacatttcactggtttcaagacaggtagaggagat
tctgtgactttgaaagatgtatcctctcggaagtttgccaaaacacttgtggactcgtcg
aacgtttgtgatgatgatgtggatgtggagaagagtcacgataatcacgattcacatttc
actggtttcaagacaggtagaggagattctgtgactttgaaagatgtatcctctcggaag
tttaccaaaacgcttgcagacccttacgtttctggttatgatttcgtaaaaattgaaaat
tgctgtcaatcttataattgcaatccccataatcttaaagacaatttatcattgtgtgtt
tacagtggcgagaaacaaattggcgaagtgcatgatgatttctgggaagcttctcatatt
tatattgactcatttagaggatgttttgatactcaatttgacttatcattcgaacgttct
gaaggtgatactcacatgatggaaattaatgtatcattagaagtggaacgtgaaaaagca
cgggctgaccaacagaatctgattgcacataatcaatcaattccatcacctaatcaacat
gtgctctctacatctgatatttcattgaatactacattatatggactattgtggaatata
cgtagaagatattatgggactgagatattaaattctacaaataaccagtcacttttaaaa
tggaaattattacttgctgacaatgttaataatcaaaagttatctgtttcttctacacca
cttcacttaccgaaatatttgaagcttttaaatgatacttataataaatggtctttacag
actgcagataaactttactggttgctggatatgaagtatattatgcatacaaaaagtgaa
agcaatcttcctatttcttacaaattccattattttgttttgattcctgataagtttgga
tgtgttggaaaacaagaaattatcaattcatttttgagctgtcgtaaaatttgtccaaat
ttaattacccgtggttggattgaaaatcattacttacaaataatgtggaaaattggtaca
atagccttactttacagtgatttatgctcaacgttactttgtgactattgtgcaccgatt
catgttctgaatgaattacactatcgttatgatcgtgaaatagaaacctgtcaaagacca
gcccttcggaaagtcatcgaacaagacgatacaccggcgcggcgcctaatcttgtgcgtc
agtcgtatagatatttttgaccaatgtgtaaagaaggcttgtttgacagatggctggtat
caaattgcttggcatccagatcccatgcttacaacactgattacttctggtaaaattcgt
gttggttcgaagttagtaactgctggtgctgaattaatcgtaaccaatccatcatctact
aagagtcaacctaaagggaagtgctcttcaggtgatgatcaaattgacgaatttaagcat
ttatatggagatgatggtgtagctgttggaatggctttgaagttgcatggaaattctaca
cgacctgtttcttggtgttcacgcctaggattcactacaaaacaaccaagttcaggtgct
ggtctgtatcctgttcctctgtgtactctcagttcagatggaggcatctgtagctcgatt
cgagtagtgatccaacgtcgatattccctacaatatatggagacattagaagtcccagaa
caaaattcaactacatcaactcttttgatacgtgcaaattctggttcagatgaattgtct
tcaaagcttcgtttaaatcgtcgtcgaatttttcgcagtgaacgggctgaggaggcggaa
gtcaggctatatgaagctcgcagactcagagttattgacagagccttagatagacttgta
attaacgattcaagtaaacgtcgaattcaacctacacatgaacaattagtagctttggga
aatgatggtgaagcattgttacaagcaattctaaatgccccagattctatggaagctgaa
tctaatttaactcaagtacaacgtgatgctatacaacattataaagagtctatcattcat
gatgcaattgttgaaaatgtcccacctagacagattactcctcttttgcgtttgagagtt
tcaggaattcatcctagagatattgctagtggttatagcgcttcgattactttatggaat
ccaacggatgaaatgttatcacttttgaaagaaggggaggttgttgagttttatcgtctg
caagtgtcggctacacgtgcaaacgatccatttgcatctccatcaactcttccaggattc
gtcaaacctataggcgtcaatataccttctggttttgtattaagcctttctggtggtcgt
acaacacgcattttatcattaggtcatatttccaacttgaaaggaatcgtttctactgat
aatatttctcgtgtatatcatccaagagtaaaattaagcgtttctgaagcctatcaaaca
attattcaagaggaccaatcttctacgagttcacttaacagaggaaatcgtgaaattgat
ttatgttgtttgattatagcaatttatcatactccaatgcattcgaatcaatcttctaaa
agctatccacctgatgttaaacaacagatggaccatccaagaacaatcgatactcctttc
aaatatccttcttctgatgtcgattgcgtttatgcagtggatgtgaattgtaaatcagaa
acatgtttatccgtgatcaaattttgggatggtttacaggctcttcatttaatggacata
gttcaaattggtcgtgtcttatgtttcaacgacttgcagttacgtcattgtcaaacaatt
aatacaacgtctaaattaaataatcaaccttcgcgtacaattcctctcattaccttacat
tatacgtctgctagcaatgttacagttgaaaaaccagtcgctcgacgttccagccggatt
gcatcaactaatgagtcagatcctactgttgtatcctgtttacaacaagttttaaaggac
tttctgtcctcaaaatcaggatgtgaaatagatttacaaatatctaattctcctttgaat
catagcaaatctttaactcctgcatcgaatacatcacattctactggtgttggtttgtca
tcattattacgtggttctattggtcgtgtacaatcaactcctgttcacaccacaatagaa
actgcgaaaatttccacttcactcgaaaattcttcctctatcttaaatataacttgtcca
tcaccaactgaatcaatgcttaagcaaggtcttccacttaaagaacaagattttactcca
attaaacgatttgtatcaacaaccactactgactgtgaacaatctttaaacaacaataca
ccaaaaactgttacttgtccttacactcgaacccttcctaatcgaagtgcttcgcgtaca
ggtctttcacgaaaaactcgtgttcgttctagtatccctggattaaaaaattcgtctata
actgtttcagataaatctatttctcacgaaataaaacaatctgaggtcgttgatattgcg
aagtcaccaactcctgatattattcactcgctacttattactgaggaaccatgttttact
cctgagcctaaagctaaacgtcctcgcagttcccaacgtagtaatcaatgtgataattca
ttagaactttgcaataacaaagagattttagaatgtattcaatcacctaaggatattttg
aatagttcagtggaagaaaaggaaattatatcatcgtctgatgcatttcgattaaaaact
cctccttacaattcagaaatattcactaattcacagcttacaaatgattcatttgataac
tccgatatgagtattgcagatttagtgaaaacacgtcaacgtcgtcagtcacgttcatct
caacacatcaccaccacatcaccaacgcaacattccacaccaatcatatctaagcaccga
ttatcattgaaaagaacttcgaaataa

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