Schistosoma mansoni: Smp_160680
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Entry
Smp_160680 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
smm
Schistosoma mansoni
Pathway
smm03440
Homologous recombination
smm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smp_160680
03460 Fanconi anemia pathway
Smp_160680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_160680
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_160680
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_160680
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
Smp_160680
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
Smp_160680
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
Smp_160680
FA (Fanconi anemia) pathway
Downstream FA components
Smp_160680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2DBD_OB2
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
8341357
NCBI-ProteinID:
XP_018652069
LinkDB
All DBs
Position
4:16153452..16183591
Genome browser
AA seq
1608 aa
AA seq
DB search
MDFEMNLGASLIRPLFNMGDDCYVGLAGDGPYSPCISPDVNESSRPQELSVYPKLINFVY
PSEDEMKADYDTVYIMASTSVNKRVDSPSQDFDDSFTGFDLTQIMNVSEIASYKSVDFSI
DSHFTGIKTGRGDSVTLKDVSSRKFAKTLVDSSNVCDDDVDVEKSHDNHDSHFTGFKTGR
GDSVTLKDVSSRKFAKTLVDSSNVCDDDVDVEKSHDNHDSRFTGFKTGRGDFVTLKDVSS
RKFAKTLVDSSNVCDDDVDVEKSHDNHDSHFTGFKTGRGDSVTLKDVSSRKFAKTLVDSS
NVCDDDVDVEKSHDNHDSHFTGFKTGRGDSVTLKDVSSRKFTKTLADPYVSGYDFVKIEN
CCQSYNCNPHNLKDNLSLCVYSGEKQIGEVHDDFWEASHIYIDSFRGCFDTQFDLSFERS
EGDTHMMEINVSLEVEREKARADQQNLIAHNQSIPSPNQHVLSTSDISLNTTLYGLLWNI
RRRYYGTEILNSTNNQSLLKWKLLLADNVNNQKLSVSSTPLHLPKYLKLLNDTYNKWSLQ
TADKLYWLLDMKYIMHTKSESNLPISYKFHYFVLIPDKFGCVGKQEIINSFLSCRKICPN
LITRGWIENHYLQIMWKIGTIALLYSDLCSTLLCDYCAPIHVLNELHYRYDREIETCQRP
ALRKVIEQDDTPARRLILCVSRIDIFDQCVKKACLTDGWYQIAWHPDPMLTTLITSGKIR
VGSKLVTAGAELIVTNPSSTKSQPKGKCSSGDDQIDEFKHLYGDDGVAVGMALKLHGNST
RPVSWCSRLGFTTKQPSSGAGLYPVPLCTLSSDGGICSSIRVVIQRRYSLQYMETLEVPE
QNSTTSTLLIRANSGSDELSSKLRLNRRRIFRSERAEEAEVRLYEARRLRVIDRALDRLV
INDSSKRRIQPTHEQLVALGNDGEALLQAILNAPDSMEAESNLTQVQRDAIQHYKESIIH
DAIVENVPPRQITPLLRLRVSGIHPRDIASGYSASITLWNPTDEMLSLLKEGEVVEFYRL
QVSATRANDPFASPSTLPGFVKPIGVNIPSGFVLSLSGGRTTRILSLGHISNLKGIVSTD
NISRVYHPRVKLSVSEAYQTIIQEDQSSTSSLNRGNREIDLCCLIIAIYHTPMHSNQSSK
SYPPDVKQQMDHPRTIDTPFKYPSSDVDCVYAVDVNCKSETCLSVIKFWDGLQALHLMDI
VQIGRVLCFNDLQLRHCQTINTTSKLNNQPSRTIPLITLHYTSASNVTVEKPVARRSSRI
ASTNESDPTVVSCLQQVLKDFLSSKSGCEIDLQISNSPLNHSKSLTPASNTSHSTGVGLS
SLLRGSIGRVQSTPVHTTIETAKISTSLENSSSILNITCPSPTESMLKQGLPLKEQDFTP
IKRFVSTTTTDCEQSLNNNTPKTVTCPYTRTLPNRSASRTGLSRKTRVRSSIPGLKNSSI
TVSDKSISHEIKQSEVVDIAKSPTPDIIHSLLITEEPCFTPEPKAKRPRSSQRSNQCDNS
LELCNNKEILECIQSPKDILNSSVEEKEIISSSDAFRLKTPPYNSEIFTNSQLTNDSFDN
SDMSIADLVKTRQRRQSRSSQHITTTSPTQHSTPIISKHRLSLKRTSK
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgaaatgaatctaggtgcctccttaatcagacccttgttcaatatgggagat
gattgctatgtgggccttgcaggtgatggaccctatagtccctgcatcagccctgatgtc
aatgaatcttctagaccacaggagttatcagtatacccgaagttaattaactttgtctat
ccttcagaagacgaaatgaaagcagattacgatacagtatatataatggcttctacgtct
gtgaacaaacgagtagattctcctagtcaagactttgatgatagttttactggttttgat
ctaactcaaattatgaatgtttccgaaatcgctagttataaaagtgttgactttagtata
gattcacatttcacaggtatcaagacaggtagaggagattctgtgactttgaaagatgta
tcctctcggaagtttgccaaaacacttgtggactcgtcgaacgtttgtgatgatgatgtg
gatgtggagaagagtcacgataatcacgattcacatttcactggtttcaagacaggtaga
ggagattctgtgactttgaaagatgtatcctctcggaagtttgccaaaacacttgtggac
tcgtcgaacgtttgtgatgatgatgtggatgtggagaagagtcacgataatcacgattca
cgtttcactggtttcaagacaggtagaggagattttgtgactttgaaagatgtatcctct
cggaagtttgccaaaacacttgtggactcgtcgaacgtttgtgatgatgatgtggatgtg
gagaagagtcacgataatcacgattcacatttcactggtttcaagacaggtagaggagat
tctgtgactttgaaagatgtatcctctcggaagtttgccaaaacacttgtggactcgtcg
aacgtttgtgatgatgatgtggatgtggagaagagtcacgataatcacgattcacatttc
actggtttcaagacaggtagaggagattctgtgactttgaaagatgtatcctctcggaag
tttaccaaaacgcttgcagacccttacgtttctggttatgatttcgtaaaaattgaaaat
tgctgtcaatcttataattgcaatccccataatcttaaagacaatttatcattgtgtgtt
tacagtggcgagaaacaaattggcgaagtgcatgatgatttctgggaagcttctcatatt
tatattgactcatttagaggatgttttgatactcaatttgacttatcattcgaacgttct
gaaggtgatactcacatgatggaaattaatgtatcattagaagtggaacgtgaaaaagca
cgggctgaccaacagaatctgattgcacataatcaatcaattccatcacctaatcaacat
gtgctctctacatctgatatttcattgaatactacattatatggactattgtggaatata
cgtagaagatattatgggactgagatattaaattctacaaataaccagtcacttttaaaa
tggaaattattacttgctgacaatgttaataatcaaaagttatctgtttcttctacacca
cttcacttaccgaaatatttgaagcttttaaatgatacttataataaatggtctttacag
actgcagataaactttactggttgctggatatgaagtatattatgcatacaaaaagtgaa
agcaatcttcctatttcttacaaattccattattttgttttgattcctgataagtttgga
tgtgttggaaaacaagaaattatcaattcatttttgagctgtcgtaaaatttgtccaaat
ttaattacccgtggttggattgaaaatcattacttacaaataatgtggaaaattggtaca
atagccttactttacagtgatttatgctcaacgttactttgtgactattgtgcaccgatt
catgttctgaatgaattacactatcgttatgatcgtgaaatagaaacctgtcaaagacca
gcccttcggaaagtcatcgaacaagacgatacaccggcgcggcgcctaatcttgtgcgtc
agtcgtatagatatttttgaccaatgtgtaaagaaggcttgtttgacagatggctggtat
caaattgcttggcatccagatcccatgcttacaacactgattacttctggtaaaattcgt
gttggttcgaagttagtaactgctggtgctgaattaatcgtaaccaatccatcatctact
aagagtcaacctaaagggaagtgctcttcaggtgatgatcaaattgacgaatttaagcat
ttatatggagatgatggtgtagctgttggaatggctttgaagttgcatggaaattctaca
cgacctgtttcttggtgttcacgcctaggattcactacaaaacaaccaagttcaggtgct
ggtctgtatcctgttcctctgtgtactctcagttcagatggaggcatctgtagctcgatt
cgagtagtgatccaacgtcgatattccctacaatatatggagacattagaagtcccagaa
caaaattcaactacatcaactcttttgatacgtgcaaattctggttcagatgaattgtct
tcaaagcttcgtttaaatcgtcgtcgaatttttcgcagtgaacgggctgaggaggcggaa
gtcaggctatatgaagctcgcagactcagagttattgacagagccttagatagacttgta
attaacgattcaagtaaacgtcgaattcaacctacacatgaacaattagtagctttggga
aatgatggtgaagcattgttacaagcaattctaaatgccccagattctatggaagctgaa
tctaatttaactcaagtacaacgtgatgctatacaacattataaagagtctatcattcat
gatgcaattgttgaaaatgtcccacctagacagattactcctcttttgcgtttgagagtt
tcaggaattcatcctagagatattgctagtggttatagcgcttcgattactttatggaat
ccaacggatgaaatgttatcacttttgaaagaaggggaggttgttgagttttatcgtctg
caagtgtcggctacacgtgcaaacgatccatttgcatctccatcaactcttccaggattc
gtcaaacctataggcgtcaatataccttctggttttgtattaagcctttctggtggtcgt
acaacacgcattttatcattaggtcatatttccaacttgaaaggaatcgtttctactgat
aatatttctcgtgtatatcatccaagagtaaaattaagcgtttctgaagcctatcaaaca
attattcaagaggaccaatcttctacgagttcacttaacagaggaaatcgtgaaattgat
ttatgttgtttgattatagcaatttatcatactccaatgcattcgaatcaatcttctaaa
agctatccacctgatgttaaacaacagatggaccatccaagaacaatcgatactcctttc
aaatatccttcttctgatgtcgattgcgtttatgcagtggatgtgaattgtaaatcagaa
acatgtttatccgtgatcaaattttgggatggtttacaggctcttcatttaatggacata
gttcaaattggtcgtgtcttatgtttcaacgacttgcagttacgtcattgtcaaacaatt
aatacaacgtctaaattaaataatcaaccttcgcgtacaattcctctcattaccttacat
tatacgtctgctagcaatgttacagttgaaaaaccagtcgctcgacgttccagccggatt
gcatcaactaatgagtcagatcctactgttgtatcctgtttacaacaagttttaaaggac
tttctgtcctcaaaatcaggatgtgaaatagatttacaaatatctaattctcctttgaat
catagcaaatctttaactcctgcatcgaatacatcacattctactggtgttggtttgtca
tcattattacgtggttctattggtcgtgtacaatcaactcctgttcacaccacaatagaa
actgcgaaaatttccacttcactcgaaaattcttcctctatcttaaatataacttgtcca
tcaccaactgaatcaatgcttaagcaaggtcttccacttaaagaacaagattttactcca
attaaacgatttgtatcaacaaccactactgactgtgaacaatctttaaacaacaataca
ccaaaaactgttacttgtccttacactcgaacccttcctaatcgaagtgcttcgcgtaca
ggtctttcacgaaaaactcgtgttcgttctagtatccctggattaaaaaattcgtctata
actgtttcagataaatctatttctcacgaaataaaacaatctgaggtcgttgatattgcg
aagtcaccaactcctgatattattcactcgctacttattactgaggaaccatgttttact
cctgagcctaaagctaaacgtcctcgcagttcccaacgtagtaatcaatgtgataattca
ttagaactttgcaataacaaagagattttagaatgtattcaatcacctaaggatattttg
aatagttcagtggaagaaaaggaaattatatcatcgtctgatgcatttcgattaaaaact
cctccttacaattcagaaatattcactaattcacagcttacaaatgattcatttgataac
tccgatatgagtattgcagatttagtgaaaacacgtcaacgtcgtcagtcacgttcatct
caacacatcaccaccacatcaccaacgcaacattccacaccaatcatatctaagcaccga
ttatcattgaaaagaacttcgaaataa
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integrated database retrieval system