Schistosoma mansoni: Smp_160870
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Entry
Smp_160870 CDS
T01095
Name
(RefSeq) putative aaa family ATPase
KO
K14571
ribosome biogenesis ATPase
Organism
smm
Schistosoma mansoni
Pathway
smm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smp_160870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smm03009
]
Smp_160870
Ribosome biogenesis [BR:
smm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Smp_160870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rad17
AAA_16
AAA_14
RuvB_N
AAA_18
AAA_5
nSTAND3
AAA_22
RNA_helicase
AAA_33
AAA_28
AAA_lid_3
AAA_17
Sigma54_activ_2
AAA_11
NPHP3_N
Mg_chelatase
NACHT
AAA_3
AAA_2
TIP49
IstB_IS21
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
8348783
NCBI-ProteinID:
XP_018651428
UniProt:
G4VFW1
LinkDB
All DBs
Position
3:complement(22405573..22420639)
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AA seq
691 aa
AA seq
DB search
MNDIGCGYGSPQIQRAYLIPLAEQFVKISVDCSSVDEFSEYIIRDKSTSCSRSNMKSWRK
DACKALRLVNTRTMVNPVPKDSPIMVDESEFPKLDMSVDLDRKLPRKRSKMSLESTTESI
SARCVSSTLSDISHTVPADLRRQIKGFLACHLLSDIGLPVWPSLLINGPPFCGKTTLIEA
ACGTLGLKIITVSVGTVPSSMRPWMDIFNQAKNSSPCILHLDDIESMEKHSSPVGTFRLT
CLLKSQLLKDMVSSGVVLIGETRSLLASLPQSILDLFTQKLTFGMLSETHRLRLLQQYLS
DDTDFISPKPVTSNSRQLQLSENLTCLELARRTPGYEVGDLIRLVAQLKMACLTSKLNDV
NDDDADDNLNNLDTNNMEGVKNGQKVHVDFSIESRVADNSFSVPVQYPLIVTREIVDKAL
VVVVPAVKNTAEFVTIPDVTWADVGGLETTRQQLYNRFMLLIDDWERAQVLHRRSGGVLL
EGPPGCGKTLVAKALSNQAGLNFLSVKGPEVLNKFQGESERRIREIFERARACQPCLIFF
DEIDAICPRRDSDESTGSRVSLVNQLLVELDGIDKHRSGRVFVVGATNRKDMIDPAILRP
GRLGLHLMINPPSNVKERLSVLSACTRSATTPRIENGMLSLELIANDSRTERMSGADLEN
LLELAKQKAQIARQDFVSQANLLDALSELHK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatataggatgtggatatggctctccacaaattcaacgggcgtatctaattccg
cttgctgaacagtttgtaaagatttctgtcgactgttcatctgtggatgagttttcagaa
tatataattcgagacaagtccacaagttgtagtagatctaatatgaagtcatggcgcaaa
gatgcttgcaaagcgttaaggctagtgaatactcgtacaatggtcaatcctgttccaaaa
gattcacctatcatggttgacgagtcggagtttcctaaattagatatgtcagtagattta
gacagaaagcttccacgtaaacgttccaagatgagcttggaatcaacaactgaatctatc
tctgctcgatgtgtttcttccacgttatcggatatcagccatacagttccagcggattta
cgaaggcaaataaaaggctttctcgcatgccacttactttccgacatcggattaccagtt
tggccatccttgttgatcaatggccctccattttgtggcaaaactacattgattgaggca
gcatgtggaaccctaggtttaaaaatcatcactgtttcggttggtacagtaccatcatct
atgcgtccatggatggatatattcaaccaagctaaaaattcctcaccatgtattttgcat
ttggatgatattgaaagtatggagaaacattcctctcctgttgggacgttccgtcttacc
tgccttctaaaaagtcaattgcttaaagatatggtcagctcaggcgttgtacttattggg
gaaactcgatcacttcttgccagtctaccccaaagtatattagatttgtttacacagaag
ttgacatttggaatgttaagtgagactcatcgcttgagactattgcagcagtacttgtca
gatgatactgactttatttcaccgaaaccagtaacctctaattcccgtcaactacaactc
agtgaaaacttaacatgtcttgaattagcacgtcgaacacctggttatgaagtcggagat
ttaattcgtctggtagctcagttaaaaatggcttgtttaacaagtaaacttaatgatgtt
aacgatgatgatgctgatgacaacttgaataatcttgatactaacaatatggagggtgtt
aagaatggtcaaaaggtgcatgttgacttctccattgagtcgcgtgttgctgataactct
ttttcggtgccagtccaatatcctttaattgtaacacgagaaatcgttgacaaagcgttg
gttgttgtcgttccagcagttaaaaatactgctgaatttgtaactattccagatgtgact
tgggctgatgtcggtggtctcgaaacaactagacaacagttatacaatcgctttatgctt
ctaatcgatgattgggaacgtgctcaggttttgcatcgacgttctggaggtgtactactt
gagggtccacctggatgcgggaaaacgctcgtagctaaagccctatccaatcaagctggt
ctcaatttcctatcggtcaaaggtccagaagtccttaataaattccaaggcgaaagcgaa
cgtcgtattcgagaaatctttgaacgagcacgtgcttgtcaaccatgtctgattttcttc
gatgaaatagatgcaatctgtccaagacgcgatagtgatgaatctacaggcagtcgagtt
agtttggttaatcaacttctagttgaattggatggtattgacaaacataggtcaggtcgc
gtttttgttgttggtgctactaatcgcaaagatatgattgatcctgcaatacttcgtcct
ggacgtctaggcttacatttgatgattaacccaccgtctaatgtgaaagaacgtctctct
gttttatcagcttgtactcggtctgcaaccactcctcgtattgagaatggtatgctgtca
cttgaactaattgcaaatgattcacgcactgagagaatgagcggcgctgatctagagaat
ttattggaactagccaagcagaaggctcaaattgcaaggcaagattttgtttcacaagcc
aatttacttgatgcattatctgagttacataaataa
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