Schistosoma mansoni: Smp_161600
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Entry
Smp_161600 CDS
T01095
Name
(RefSeq) sox transcription factor
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_161600
Transcription factors [BR:
smm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
Smp_161600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4261
Motif
Other DBs
NCBI-GeneID:
8341418
NCBI-ProteinID:
XP_018645449
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Position
3
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AA seq
650 aa
AA seq
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MTKIFDLLETICRSKHLSFEEKLKILMNIAEYVIKFYEYLTHSDTTYTFSQDHETPLNLT
QPKMLNKETNNNVSSSESSSFLYHFNQQNSPDQSIKSSKQSFLSSTPDSNISINLINQIP
QSIPWLQKSDPLSNGLTCTSNGNTDVTLSESNLTSSFNWLSLFSDGKELPNWLLEQIIPT
SEKVKNEYLTQMKKFIKLSNQEYTTNNKLLINNDDNHQLLRNDIDPIDKKSIIQKSLISN
TINQLHEIIDQTKSNTTTNNSSSFVSFNEKLKSISETNNNQYGFPIQSIYNNHHNNPGGI
LLMDTKLSTIQPPINNITSLVSNHSKLIEKDDPLLNDDPNHNNHSNISLSNGITYHQSIF
YNPTINTTNNDHVSNNDPFYLTQNSNELCNQHITSLSKLTNYNLTNISDPINVNLNLINT
VLPSNDPDHHPQHHQDHQHPRTNPNTTSTTNINEDNDMHAGLLTRMDSNSGRNHGQQFKT
QMKSQRTTKSNLDQRNDKSSSHIKRPMNAFMIWARDERRKILKACPDMHNSSISKFLGAK
WKSMSAEVKQPYYEEQARLSRQHMEEHPAYRYRPRPKRTCIVDGRKLRISEYKELMRSRG
DSTRRQWISSTDEQAQKIVEDILGLHYMEAVKLMRGYDDEEEEEEGNKRF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatttttgatttgctggaaactatttgtcgatctaagcatctatcatttgaa
gaaaagctaaaaattcttatgaatatagctgaatatgttattaaattttatgaatattta
actcattcagatactacttataccttttcacaagatcatgaaactccattgaatcttaca
caaccaaaaatgttgaacaaagaaacaaataacaatgtatcttcttctgaatcttcttca
ttcctttatcatttcaatcaacaaaattctcctgatcaatcaatcaaatcttcaaaacaa
tcatttttatcatcaacaccagacagtaatatttcaatcaatttaatcaatcaaatacca
cagtctataccatggttacaaaaatcagatccattgtcaaatggattaacttgtacttca
aatggcaatactgatgtaacactttctgaaagtaatctaacttcatcatttaattggtta
tcattattttcagatggtaaagaattaccaaattggttattagaacagattataccaact
agtgaaaaggtaaaaaatgaatatttaacccaaatgaaaaaatttataaaattatctaat
caagaatatactactaataataaactacttataaacaatgatgataatcatcaactatta
cgtaatgacattgatcctattgataagaaatcaataatacaaaaatcattgatatcgaat
acaattaatcagttacatgaaattattgatcaaacaaaatctaatactactaccaataat
agtagtagttttgtatcattcaatgaaaaattaaagtctatctctgaaacaaacaataat
caatatggttttcctatacaatctatttataataatcatcataataatccagggggtatc
cttttaatggatactaagttatctactatacaaccaccaatcaataatattacatcattg
gttagtaaccattcaaaattgattgaaaaagatgatcccctattaaatgatgatcctaat
cataataatcatagtaatatatcattatctaatggaataacctatcatcaatcaatattt
tataatcctactatcaatactactaacaatgatcatgttagtaataatgatccattctat
ttaacacagaattctaatgaattatgtaatcaacatattacatcattatcaaagctaaca
aattataatttaactaatatatcagatcctattaatgttaatttaaatttaatcaatact
gttcttccttcaaatgatcccgatcatcatcctcaacatcatcaagatcaccaacatcct
agaactaatccaaatacaactagtactactaatataaatgaagataatgatatgcatgcc
ggattattaactagaatggattctaactctggacgaaatcatggtcaacagtttaaaaca
caaatgaaatcccaacgtacaactaaatcaaatcttgatcaacgtaatgataaatcttca
tctcatattaaacgaccaatgaatgctttcatgatatgggcaagagatgaaaggagaaaa
attttaaaagcatgccctgatatgcacaatagtagtatatcgaaatttcttggagctaaa
tggaaatctatgagtgctgaagttaaacaaccatattatgaagaacaagctagattaagt
cgtcaacatatggaagaacacccggcttatcgttatagaccacgtccaaaacgtacatgt
attgtagatggtagaaaattacgtatatctgaatataaagaattaatgcgttcaagagga
gattctacacgtagacaatggattagttcaacagatgaacaagctcaaaaaattgtggaa
gatattttagggttacattacatggaagctgttaaactgatgaggggatatgatgatgaa
gaagaagaagaagaaggaaataaaagattttaa
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