Schistosoma mansoni: Smp_162250
Help
Entry
Smp_162250 CDS
T01095
Name
(RefSeq) rpgr-interacting protein 1 related
KO
K16550
protein fantom
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smm01009
]
Smp_162250
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smm03037
]
Smp_162250
Protein phosphatases and associated proteins [BR:
smm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Smp_162250
Cilium and associated proteins [BR:
smm03037
]
Primary cilia and associated proteins
MKS complex
Smp_162250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
Motif
Other DBs
NCBI-GeneID:
8346288
NCBI-ProteinID:
XP_018652871
LinkDB
All DBs
Position
6:complement(730160..784868)
Genome browser
AA seq
1140 aa
AA seq
DB search
MESKNAISSWSKEKLEDQYLRLYDDYLTLKKHACKQEERIKKMATKILRLASDKKDSDPG
SVLKEDYQEQIEVLERKNATLTRKPLSARKASSATIQTTGRNSCVGEKPMNNSNVIQTLR
FQNSAFEKTIQKLSGQLKERNELIDQLKEELQIKEKIHTNDLVTLGEQVTSKQRIALQEN
LDLIRTQRELREKQLLINHLEERIKEAESNYNIIKSTNRQLVIEIERLTRESISIVVQSD
KSLLKLILLLQYAFDDAKRENQALKESNEKLIANAFSIKPEQNWTLKEQKLRGQIDHLEM
MVHNLQQQLKQTEQQEKHSAVEEKIIPNRQQSNQLESIPNKQVDKVNSNDQATVTNTTTQ
MFAQITGFTVEELEDAIMMLRERKSKSQSVDEHLLPNSDKYLLGQNKGQLHLLPSLLYKY
QTNSSPTTNNNQNNHITEESINLFLTWDFYDYETQATPILLIQNSIDLNMTIQYPIEIND
TLMNYLIKEPCTIEMHQVINSNYRTIAVGKLNFTQLFTGKDDSIEIPDQGSIVRRQGQLD
LFLISTPNNSINIKENEKIKFGTLDYWIRLTAPMLDSIKLYKERFQQLPGSISFTNKSSI
HHEELHSTDLSKNILTIEIMKITNLIQQRLNYLPSIYFVYQFYNELEYASMIIKQNNTPI
FNDLHTIQLEMNDELDNYLKTQNLNIYIVDSTDPSPETSCLGLAIIPLIGLINKNQKIDG
IFEIFPLTTLKKRQQSNQINKNQSNCGLLYLKMYWQRPYTVTTTTTTTNSRNTVVYNQPN
MEESKDLEMEPVKQAAEKPYITQYESSKEACLQPKSSSNVSFAKPIDKLNPSDNLPNNST
RKKQDTPDLDQVIVKVPELTVNKTDNQIPNPSDDNPKINTKTNEMLSSSSPSIQSQLEDS
GKQSIVPTPHPRTKTSEPQNLKIDLLNQSITSKKTISKTNQDPEPSSSIFTDENHVKIEL
HGLQLINLSKLLKSNQTLPCQIFIEYSFLGYKEPFETSTYPLIEWIDNNKNILKSNFYYT
KTFPVDFTENYERRQYLASYLLPEDPNNGNIIFIIVSEPSTSTTTQSAECEEIGYAMINI
RQIIQDNCDIDHVFIPITAAKAVDGETESLNEIGRLCVSFYGLSALHAIIAEMPQVKLAI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaaaaatgccattagttcatggtctaaagaaaaattggaagatcaatactta
cgattatatgatgattatttaacattaaaaaaacatgcatgtaaacaagaggaacgtatc
aaaaaaatggcaactaaaattctacgtttagctagtgataagaaagattctgatcctgga
tctgtattgaaagaagactatcaagaacagattgaagtgttggaaagaaaaaatgctacg
ttgacacgaaaaccactttcagctcgtaaagcgagttccgcaactattcaaacaacaggt
cgtaattcttgtgttggagaaaaaccaatgaataattctaatgttatacaaacattacgt
tttcaaaattctgcatttgaaaaaacgatacaaaaattatcgggacaattaaaagaacgt
aatgaattaattgatcaattaaaagaagaattacaaataaaagagaaaattcatacgaat
gatttagttacccttggtgaacaagtcacatcaaaacaaaggattgctttacaagaaaat
cttgatttaatacgtacccaaagagaattacgtgaaaaacaattactgattaatcattta
gaggaacgtattaaagaagctgaatctaattataatataattaaatcaactaatcgtcaa
ttagtcatagaaattgaacgtttaacacgtgaatcaatttcaatcgttgtccaatcagat
aaaagtttactcaaattaatcttattgcttcaatatgcatttgatgatgcaaaacgtgaa
aatcaagcccttaaagaatccaatgaaaaacttatagcaaatgcattctctattaaacct
gaacaaaattggacattgaaagaacaaaaattacgtggacaaattgatcatttagaaatg
atggtacataatttacaacaacaattaaaacaaactgaacaacaagaaaaacattcagct
gttgaagagaaaattataccaaatagacaacaatctaatcaattagaaagtataccaaat
aaacaagttgataaggtcaattcaaatgaccaagcgacagtaacaaatacaacaactcaa
atgtttgcacaaattactggattcactgttgaagaattagaagatgctattatgatgtta
cgagaacgtaaatcaaaatctcaatcagtcgatgaacatctactgcccaattctgataaa
tatttattgggtcaaaacaaaggtcaattacatttgttaccatcgttactatataaatat
caaacaaattcttcccctacaacgaataataatcaaaataatcatattactgaagaatca
atcaatctatttctaacatgggatttttatgattatgaaacacaagcaacaccaatttta
cttatacaaaattcaatagatttaaatatgacaatacaatatcctatagaaattaatgat
acattaatgaattatttaatcaaggaaccatgcactatagaaatgcatcaagttatcaat
tccaattatcgtactattgctgttggaaaacttaatttcacacaattatttactggaaaa
gacgacagtatagaaatccctgatcaaggaagtattgtacgtcgacaaggtcaattagat
ttatttcttatctctactccaaataattccattaacattaaagaaaatgaaaagataaag
tttggaactttagattattggatacgactaactgcaccgatgctagattctattaaactt
tataaagaaagatttcaacaattacctggatctatatcattcactaacaagtcatctatt
catcatgaagaattacattcaacagatctatccaagaatattcttactattgaaataatg
aaaattactaatttaattcaacagcgtttaaattatttaccatcaatttattttgtatat
caattttataatgaattagaatatgcttctatgataataaaacagaataatacaccaata
tttaatgatttacatactattcaattagagatgaatgatgaacttgataattatttaaaa
acacagaatttaaacatttacattgttgatagtacagatccttcacctgaaacaagttgt
cttggcttagctataattccactgattggtttgatcaataaaaatcaaaaaattgatggt
atatttgaaatattccctttaactacactcaaaaaacggcaacaatctaatcaaatcaat
aaaaatcaatctaattgtggtttattatatttaaaaatgtattggcaacgaccatatact
gttactactactactactactaccaatagtcgtaatacagtagtatataatcaaccaaat
atggaagaatctaaagatttagaaatggaaccagtaaaacaagctgctgagaagccctac
ataactcaatatgaatcttctaaagaagcttgcttgcaaccaaaatcatcatctaatgtc
tcatttgccaaacctatcgataaactgaatccttctgacaatttgccgaataactcaact
agaaagaaacaggatacacctgatctagatcaagtcattgtcaaagttcctgaactaact
gtcaataaaacagataatcagatcccaaatccctctgatgataatccaaagatcaataca
aaaacgaatgaaatgttatcatcatcatcaccatcgatacaaagtcaattagaagattca
gggaaacaatcaattgttccaactccacatcctagaactaaaacaagtgaaccgcaaaat
ttgaaaattgatttattgaatcaatcaattacttcaaagaaaaccatcagcaaaactaat
caggatccagaaccatcatcatcaatattcaccgatgaaaatcatgtcaaaattgaatta
catggtttacaattaatcaatttatctaaactattaaaaagcaatcaaacattaccatgt
caaatctttattgaatattcatttcttggttataaagaaccatttgaaactagtacatat
ccattaattgaatggatagataataataaaaatatattaaaatcaaatttttattatact
aaaacatttccagttgattttacagagaattatgaacgtagacaatatttagctagttat
ctattaccagaagatccaaataatggtaatataatttttattattgttagtgaaccatct
acatcaacaacaacacaatcagctgaatgtgaagaaattggttatgctatgattaatata
agacaaatcatacaagataattgtgatatagatcatgtatttattccaattacagctgct
aaagctgtcgatggtgaaacggagagtttaaatgaaatcggaagactttgtgtatcattt
tatggtttatcagcacttcatgcaattattgctgaaatgcctcaagttaaattggctatt
taa
DBGET
integrated database retrieval system
