Schistosoma mansoni: Smp_162890
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Entry
Smp_162890 CDS
T01095
Name
(RefSeq) putative rotamase
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
smm
Schistosoma mansoni
Pathway
smm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Smp_162890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_162890
03110 Chaperones and folding catalysts [BR:
smm03110
]
Smp_162890
Enzymes [BR:
smm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
Smp_162890
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Smp_162890
Chaperones and folding catalysts [BR:
smm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
Smp_162890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
8353801
NCBI-ProteinID:
XP_018655605
LinkDB
All DBs
Position
W:complement(56283458..56284602)
Genome browser
AA seq
134 aa
AA seq
DB search
MSSLPEGWVSRISSSSGKPYYVNTVTNESQWEFPQHPVISSTNKVQCLHLLVKHNESRRP
SSWKQQNITRSKDEALNLIKSNDCSSAHSGGDLNFFSRGQMQKPFEDAAFKLEIGEMCGP
VYTDSGIHLIKRIA
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgttacctgaaggttgggtatctcgaatcagttccagtagtggaaaaccatat
tatgttaatacagttacaaatgagtcacaatgggaatttcctcaacacccagtaatatca
tctacaaataaagtacaatgcttacatttactggtgaagcacaatgaatctcgacgtcct
tcatcttggaaacaacagaatatcactcgatctaaagatgaagccttaaatttaataaaa
agtaatgattgtagttcagctcattctggcggtgatttaaatttctttagtcgcggtcaa
atgcaaaagccatttgaagatgctgcatttaaattagaaattggtgaaatgtgtggtcct
gtatatacagattctggaattcatttaatcaaacgaattgcataa
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