Schistosoma mansoni: Smp_163110
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Entry
Smp_163110 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_163110
03016 Transfer RNA biogenesis [BR:
smm03016
]
Smp_163110
Enzymes [BR:
smm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smp_163110
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Smp_163110
Transfer RNA biogenesis [BR:
smm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Smp_163110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Motif
Other DBs
NCBI-GeneID:
8353856
NCBI-ProteinID:
XP_018655519
UniProt:
A0A3Q0KRM8
LinkDB
All DBs
Position
W:53300151..53330817
Genome browser
AA seq
742 aa
AA seq
DB search
MATAFETEMGVLPELSKAVQEMDWILPTDIQSEAVPLILGGGDVLMAAETGSGKTGAFCL
PVLQIVYETLKLLQSNKQNKANILPKHSSGQMKLNVYDRTDAMAIDANGLLCQSRDPGGW
HGARANRGVKCSGRYYYEAHVTDEGLCRVGWSTLNASHDVGTDAESFGFGGTGKMSHRRQ
FDSYGEAFGKGDTIGCFLDLDNGSISWSKNGKLFGKAYDIPAHLRSKGLFPSVCLKNAEL
RFNFGDSAFDFPPPNGWIGISSCPETNSVENTFKATSSSPVYKSKPNAPLALIIEPSREL
AEQTYEQIKKFKRYLKDPCPRECLLIGGANSKQQMDELHSGVDIVVATPGRLDDLISTQS
LLLSNCRFFVLDECDGLLSAGYGDMVSRIHKQIPKATADGNRLQMIVCSATLHSMDVKRL
ANKLMHFPVWIDLKGQDSVPETVHHVVCLIDPNNDTSWKELMKSNKHIQTDGVHMKDQLN
PNSSTPEVLSEAVKLLKGEYVIRAIKQQNMDRALIFCRTKLDCDNLEQYFISMGGGPNRR
DSPFSCVCLHSDRAPPERKANLQKFKNGEVHFLICTDVAARGIDITGLPYVINVTLPDEK
QNYVHRIGRVGRAERMGLAISLVSTVKEKVWYHSNCSTRGRGCYNTRLLDQGGCCIWYNE
PNLLNEIEEHLGVTIDTVDKNLTIPVDAFDGKVVYGQKLKKMAPKYQSHVNILASSVKEL
DNLEKRSQQDFLRLRYDEELAI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcatttgaaaccgaaatgggtgtattacctgaactatctaaggctgtacaa
gaaatggactggattttgcctaccgacatccaaagtgaagctgttcccttaatcctcggt
ggaggtgatgttttaatggctgctgaaaccggaagtggaaaaacaggagcgttttgttta
cctgttcttcaaattgtatatgaaacacttaaacttctccaatctaataaacagaacaaa
gctaatatcttaccaaaacattcaagcggccagatgaaactcaatgtatatgatcgtacc
gatgctatggcaatcgatgccaatggactgctttgtcaaagtcgcgatccaggtggatgg
cacggagctagagcgaatcgcggagtaaagtgttcaggtcgttattactatgaggcgcat
gtaactgatgaagggctatgtcgggtcggctggtcaactttgaatgcatcacatgacgtt
ggaactgatgctgagagttttggcttcggtggaacaggtaaaatgtctcatcgacgacag
tttgattcgtatggtgaggcttttgggaaaggagatactattggctgtttcttagatctt
gataatggatccataagttggtcgaaaaatggtaaactatttggaaaagcttatgacatc
ccagctcatttacgttctaaaggattattcccatcagtatgcttaaaaaatgctgagtta
agatttaatttcggagatagtgcatttgattttccaccaccaaatggttggataggtatc
agttcttgtccggaaacaaacagtgttgaaaatacttttaaagccacttcatctagccca
gtctacaaatctaaaccaaatgccccactagctttaattattgaaccttctcgtgaacta
gcagaacaaacttatgaacaaattaaaaaatttaaacgttatttaaaagatccatgtcct
cgtgagtgcttgttaattggtggtgccaacagtaaacaacaaatggatgaattacattct
ggggttgatattgttgtagctactcccgggcgtttggatgatcttatttcaacacagtct
cttctgttaagtaactgtcgtttttttgtcttggatgaatgtgatggtcttctctctgct
ggttatggagacatggtttctcgaatacacaaacaaatacctaaggctactgctgatgga
aatcgtttacaaatgattgtttgttcagcgactcttcattccatggatgttaaacgatta
gctaataaattgatgcattttccagtatggatagatttaaaaggtcaagatagtgtccca
gaaacggtacatcatgtggtgtgccttattgatcccaacaatgatacatcgtggaaagaa
ttgatgaaatcaaataaacatatacaaacagatggggttcacatgaaagatcaacttaat
cctaattcgagtacaccagaggttttgtcagaagctgtaaaattactaaaaggcgagtat
gtcattcgtgcgattaaacagcaaaatatggatcgcgcacttattttctgtcgtacaaaa
ttggactgtgataatctggaacagtatttcatatcaatgggtggtggacctaatcgtcgt
gattcaccatttagttgcgtttgtcttcatagtgatcgagctcctccggaacgtaaagca
aatttgcaaaagttcaagaatggagaggttcactttcttatatgtacagatgttgctgca
cgtggtatcgatattactggtctcccatatgtaattaatgtgacattgccagatgaaaaa
caaaattacgtgcatagaatcggtcgcgtaggtcgtgctgaaagaatgggtctggcaatc
agtttagtgtcaactgtcaaagaaaaagtatggtatcactctaattgctctacacgtggt
cgtggctgttataatactcgtttgttagatcaaggcggttgttgtatttggtataacgag
cccaatttattaaacgaaattgaagaacacttaggtgtgactatcgatacagtggacaaa
aatttaactatacctgtagatgcatttgatggaaaagttgtatatggtcagaaattgaaa
aaaatggcgcctaaatatcaaagtcatgtgaatattttggcatcctccgttaaagaacta
gataatcttgaaaagagatcacaacaagactttttgcgtttacgatacgacgaagaatta
gccatatga
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