Schistosoma mansoni: Smp_163960
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Entry
Smp_163960 CDS
T01095
Name
(RefSeq) putative limd1
KO
K16682
LIM domain-containing protein
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_163960
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_163960
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Smp_163960
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
Smp_163960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
8345254
NCBI-ProteinID:
XP_018653440
LinkDB
All DBs
Position
6:18804627..18833253
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AA seq
581 aa
AA seq
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MKNTNTVLNETICMNTSGNNGYLNENESNSNHTTSILGFNSRIFNNCAECGLRIINLMDT
CYAMGYLYHNSCFVCCCCKRTLRGKVFYKDQDKIYCEEDYLILLAVGKTYHPGCFRCCIC
TKCLDGIPFTMDSNNLIYCLPDYHLINGPLCAVCGLVIMPDEGSNEVKRVVALGKEFHID
CYRCIDCKRNLGDESDKRCYPLNEPDPSTSGRIIQRLLCLNCHLQRIGAIPATSAGTGGN
TVINTNNNPHHYTTSTNNIAVAGSHIRSNSGIISHANTTPISNTRYATMPNRIHGVNKLN
TINTNQYYQHHPSNHSHNPLNNNNPSSSSTLLTHSYSPTTSFSRNIQHPIPNSTTSISNI
WIDFKYIPVNMGPCFPEISQSFVWIYTADDQNQINSNLWSGMDVKWNTLRSEFISVEDNQ
FLSGSLNYFSHEDPVPWPSKNVGKLNYKAIEISIDIFNVTSLKIMGKRLFIPITCGLRHN
NNEFSLNVTGLIWNEFISQTSITDLFIQSELTIKQTQSIKLHWMDPIEKEYYMRPVMNMN
TVRYNSLISNLNNALYDVMDRNRKFSLLQNKLRYFLVTIKV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatacaaatacagttttaaatgaaactatatgtatgaatacatcagggaataat
ggttatttgaatgaaaatgaatccaatagtaatcatacaacttctatattaggattcaat
tcaagaatatttaataattgtgccgaatgtggtttaagaattattaatttgatggataca
tgttatgctatgggttatttatatcataattcatgttttgtatgctgttgttgtaagaga
acgttacgcgggaaagtattttacaaagatcaggataaaatctattgtgaagaagattat
ctgatacttctagctgttggaaaaacatatcatccaggatgttttcgatgttgtatttgt
actaaatgtttagatggaataccatttacaatggattcaaataatttaatttattgttta
ccagattatcatttaattaatggaccattatgtgctgtatgtggattagtaattatgcca
gatgaaggttcaaatgaagttaaacgagttgtggcacttggcaaagagtttcatattgat
tgttatcgttgtattgattgtaaacgaaatttaggtgatgaatcagataaacgttgttat
ccattgaatgaaccagatccttcaacatctggacgtattatccaacgattattatgttta
aattgtcatttacaacgaattggtgctattcctgcaacatcagctggtactggtggaaac
actgtaataaacactaataataatcctcatcattatactactagtactaataatattgct
gttgctgggagtcatataagatcaaatagtgggattataagtcatgccaacacaacacct
ataagtaatacacgttatgcaactatgccaaatagaattcatggagttaataaattaaat
acaatcaatacgaatcaatattatcaacatcatccttctaatcattcacataatccatta
aataataataatccatcttcatcaagtaccttattaactcatagttattcaccaacaaca
tcatttagtcgtaatatacaacatccaataccaaattcaacaacttcaatatcaaatatt
tggatagatttcaaatatattcctgtcaatatgggtccttgtttccctgaaataagtcag
tcatttgtttggatttatactgctgatgatcagaatcaaatcaactcgaatttgtggtcc
ggaatggacgtaaaatggaacactttgagaagtgaatttattagcgttgaagacaaccaa
tttctatctggatcattaaactacttcagccatgaagatcctgtcccatggccatcaaaa
aatgtcggaaaactaaattataaggcaattgaaatctcgatcgatatatttaatgttacc
agtctcaagataatggggaaacgtctttttatcccgataacttgtggtttgcgacacaac
aacaatgagttctcactgaacgtgactggattaatatggaatgaattcatttcccaaacg
tcaataactgatttatttattcaaagtgaattaactataaagcaaacacaatcgattaaa
ttgcactggatggatccaattgaaaaggagtactacatgagacctgtaatgaatatgaac
actgtccgttataactcgttaatttctaacttaaacaatgcattgtatgatgtgatggat
agaaatcgtaagttttctcttctacaaaataaacttcgatattttcttgtaactataaaa
gtttag
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