Schistosoma mansoni: Smp_164160
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Entry
Smp_164160 CDS
T01095
Name
(RefSeq) putative tumor differentially expressed protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_164160
03015 mRNA surveillance pathway
Smp_164160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_164160
03041 Spliceosome [BR:
smm03041
]
Smp_164160
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Smp_164160
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
Smp_164160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
8345286
NCBI-ProteinID:
XP_018653469
LinkDB
All DBs
Position
6:<19737795..19754227
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AA seq
680 aa
AA seq
DB search
MSKINLESMRPWIVKRITELLNFEDEVVCDYIFNQLEERHPDPKEIQINITGFLNSKNAR
VFLSELWDLLLSAMQTPDGVPAAFLEAKKEEIAKRQEDEKFVLEMRRRENELIQKGTSRT
SNLSSEQMHDQKRVSSVKSNGVAESEEPETFTNRNRSTSRTASPAPQPPTTTIESREKLT
SRTAHRDETSSSRSPEQHRRRRHHRHSPERCPVDTKRRRSRSRSRHRRQRSKSRSKLVQK
PKSPVTDWRKDLMAGRRRSPPEMPESSFYGNEKRSKGHKHSKKHDKQRHDNSHSHKSHKR
SPSHNSDYYRSRKHTHNSGSRHHNIVEVNERDQRPSYLEQSRKDSFAGNYRKYEGPDLPF
HYDHRSSSRYRQDAESHGRNASPEPSRTRDRESDWHLKDHDHRHSHHSGHIKRRETSSGH
GNLSLERRQYHRLPSPEGPSLPPNISKRPSDSKIIEGVPSKRTKREASASSSSSSTSSSS
SSSSGSSSSNSSSSSGSSSSNESESEENEEESKKTQIEIPKKEPTPEGPALPPESEVSQP
EGPALPPAVELAVEWSENPVHSGSTSPSSTTSGSSSGDEHSEESGSSSSDSDSGSSSGTG
SSSSSESENEAKTKLHKSERNGKHPNNLGNHMSPEGPELPPSSRSSSHKRNDSHESVEEV
LRRRALESLLRSSQKRRGSP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaattaatttggagtctatgagaccatggattgttaaacgcataacagagctt
ctaaactttgaggatgaggtcgtctgtgactacattttcaaccagctggaggagcgccat
ccagacccaaaggaaatccagattaatataacgggatttctaaacagcaaaaatgcgagg
gtgttcttatccgaactgtgggatttattgttatctgccatgcagacaccagatggcgtt
cctgcagcttttctggaagccaagaaagaagagatcgcaaagcgtcaggaggatgaaaag
tttgttctcgaaatgagaaggagggaaaacgagttaattcagaagggaactagtcgaacg
tccaacctgagttctgaacaaatgcatgatcagaagcgcgtttcgtccgtcaaaagcaat
ggagtagcagaatctgaagagccggaaacttttaccaatcgcaatcgttccacttcacga
acagcatcaccagcccctcaaccacctacaactaccatagaaagtcgtgaaaaactcact
agtcgaactgctcatagagatgaaacgagttcgtcgcgttcccctgaacaacaccgtcgc
cgtcgtcatcatcgccattctcctgagagatgtccggtcgacacgaaacgtcgtagatca
cgttcacgctctcgtcaccgtcgtcagcgttcaaaatctcgctccaaactggtacaaaag
ccgaaatcacctgtcactgactggagaaaagacttgatggccggtagacgtcgcagtcca
ccggaaatgcctgagagtagtttttatggaaacgaaaaacgttcaaaaggccataagcat
tccaaaaaacatgataaacaaagacatgacaacagtcattcacacaaatctcacaaaagg
tctccatctcacaactctgactactatcgatcgcgcaaacatactcataattctggatcc
cgacatcataacatagtcgaagtcaacgaaagagatcaaagaccaagttatttggaacaa
tcaagaaaagatagttttgctggaaactacagaaaatatgaaggtcctgacctacctttt
cattatgaccatcgttcgtctagtagatacagacaagatgctgaatcacacggtcgcaac
gcaagcccagaaccaagccgcacgcgcgatagagaatctgattggcatctcaaagatcat
gaccaccgacatagtcaccattctggtcatataaaaagaagagaaacctcatctggacac
ggaaatttatccttggaaagacgtcagtatcatcgtttaccgagtcctgaaggaccatca
ttgcccccaaatatttctaaaagaccttcagattccaagataatcgaaggagtcccaagt
aagcgcacaaaacgtgaggcatctgcttcgtcaagcagctcatcaaccagcagcagcagc
tctagtagtagcggtagtagtagtagcaatagtagcagtagtagtggaagctccagtagc
aatgaaagcgagagcgaagaaaatgaagaagaatccaaaaagacacaaattgaaatcccg
aagaaggaacccacccctgaaggtcctgctctccctccagagtcggaggtatcccaaccc
gaaggtcctgctcttcccccagctgttgaactcgccgtagagtggtcggaaaacccagtc
cattctggatcaacatccccaagttcaacaacttcaggatcttctagtggtgacgaacac
agtgaggaatcgggatcaagttcaagtgatagtgacagtggcagcagtagtggtaccggt
agtagcagtagcagtgaaagtgaaaatgaagccaaaacaaaacttcacaaatctgaaaga
aacggaaaacaccctaacaatcttggaaatcatatgtctcctgaaggtcctgaattacct
ccttcctctcgttctagttcacataagaggaatgactcccatgaatcagttgaagaggtt
ttacgtcgacgagctttggagtctttactgcggagctcacaaaaacgccgtggttctcct
tag
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