Schistosoma mansoni: Smp_166190
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Entry
Smp_166190 CDS
T01095
Name
(RefSeq) putative nucleolysin tia-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_166190
03041 Spliceosome [BR:
smm03041
]
Smp_166190
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Smp_166190
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
Smp_166190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_7
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
8352763
NCBI-ProteinID:
XP_018652184
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All DBs
Position
4:complement(<19533308..>19586466)
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AA seq
547 aa
AA seq
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MSLTYLEDYVYDAELTNAWLGIYKHIVQSDNSFHIFVGDLAPEVQDETLLAAFSNFGTIT
ECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIMNGQIIGTRAIRTNWAVRKDPADQAKD
HRPLNYLEVFNASSSTNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRF
DSHVAATQAIVTMHGKIVGDQACKCSWGKEPTFTNKQGLAKRLSSAMFVPTLNHNMNDDR
NGILLKPQGSWLTSPSRQNNLILDLPAKKYMSEELHPVSVSCITPTDKTQIINNGQHLSM
RNVLQDANKLNGSVVNPIANNPLWPYTCWFAGNPNQDTPIPALLFDNVTRGTLTNQTVIP
FVPSTDNNPLLLSLSAIELAKNYQSEKPEINIIPNITNAQFSDSQTTFPNIGDIQNALIN
HKTPVYQSVHNNNNNNNNVTSPCDIQQHILNLKNMTIPNLDLTNYSALSNIPLITFSAYP
FNSTNISPFNHTTTVTVPGTIVNTTTNSNEIDKNSIHQSAQLSNFGQYTVYNTTTELMFV
WFSTNFV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgacatatttagaagactatgtttatgatgcggaattaacgaatgcttggctt
ggaatttataagcatatcgttcagagtgataattcatttcatatatttgttggtgatcta
gctccagaggtgcaggatgaaactttgttggcagcattttctaattttggaacaattaca
gaatgcaaaatcatcaaggatatgcatacacagaagccgaaaggatatggatttgtggct
tatgcaacaagacaagaagctgaacgtgctatccgtatcatgaacggtcaaattattgga
acaagagcaataagaacgaactgggcagtacgaaaggacccagcagatcaggctaaagat
catcgtccattaaattatttggaagtatttaatgcatcatcttctacaaatacaacaatt
tatgttggtggtataacgaatgaattgactgaaaagcttcttcaagattcattcaaacaa
tttggtgaaatcaaagaaattagaatatttaaagataagggtttttcatttattagattc
gattcacacgtggccgctactcaagcaattgtaacaatgcatggtaaaattgtcggtgat
caagcctgtaaatgttcatggggtaaagaaccaacctttactaacaaacaaggattagca
aagcgtctatcatctgctatgtttgttccgactctaaatcataatatgaatgatgatcga
aatggaatcctgttgaaacctcaaggctcttggcttacatctccatcaagacaaaataat
ttgatattagacttaccagcgaaaaaatatatgtctgaagaattacatccagttagtgta
agttgtataacaccaacagataaaactcaaataataaataatggacaacatttatcaatg
aggaacgttttacaagatgctaacaagttgaacggttccgttgtcaatccgatagcaaac
aatcccttatggccttatacatgctggtttgctgggaatcctaatcaagatactccaatc
cccgcattactatttgataatgtgacaagaggaacgctgacgaatcaaactgtaatccct
tttgtaccgtcaacagataacaatccactcctcttaagtttatcggctatagaattggct
aaaaattaccaatcagagaaacctgagattaacatcattcctaacataacaaatgctcaa
ttctctgatagtcaaactacttttccaaatattggtgatattcaaaatgcattaataaat
cataaaactcctgtatatcaaagtgttcataacaacaacaataataataataacgttact
tcaccatgtgatatacaacaacacattttaaatttaaaaaatatgaccattccaaatttg
gatctgactaattattcagcattatctaatattccattgattacattttcagcatatcca
tttaattctacaaatatttcaccatttaatcatacaacaactgttactgtacctggtact
attgttaatacaacaacaaatagtaatgaaattgataaaaattcaattcatcaatctgct
caattatcaaattttggacagtatactgtatataatacaacaacagaacttatgtttgtt
tggttttctacaaatttcgtttaa
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