Schistosoma mansoni: Smp_166310
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Entry
Smp_166310 CDS
T01095
Name
(RefSeq) putative ran gtpase-activating protein
KO
K14319
Ran GTPase-activating protein 1
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_166310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_166310
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Smp_166310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
LRR_6
LRR_CARMIL
LRR_4
LRR_SKP2
LRR_8
LRR_NXF1-5
CDC45
Motif
Other DBs
NCBI-GeneID:
8352943
NCBI-ProteinID:
XP_018650402
UniProt:
G4VD08
LinkDB
All DBs
Position
2:<24146682..>24161062
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AA seq
744 aa
AA seq
DB search
MVVGSNGYNGWTVSFANHALKLDKAADANDIVSALASNPNAECLNLSGNTLGIDAAKPIG
IALEKNRFIKRCLFNDLFTGRLKSEIAPALKHLSNGLMVSKSQIVELDLSDNAFGPNGVV
GITDLLASNTCHTLEILRMNNQGLGHEGCRYLAEALEEGRCLSKNQGLLLKIFSGGRNRL
ENVGAQMLSKVFCDMGSLEELSLYQNGIGIHGIDGILSLVKIIKSSPNLRVLNLSDNSLT
PRGGEAIARALPSVVNLEELYLSDCILRSTGVKALASAFEDPDTTPNLRVLNLTGNEIKL
SAGINLILSLGNKSHLELLDLNANEFGRSGVRSIIQTLDSVGLLHTLPNPNDKDLSSISV
VEESYLWAFDEDQGSDQEGEDDETNEGEEEDVDNNDAEEYDDSRSRYGDDDDERENQTDT
TSDQKESVNFSFREAFSKFGTIGGGGCLTPKNENIQINKPGPFGTQSLGLFSGISPQNTD
TTDAGVIRSKLWPSSGLFNFGDSANTKRNLFSPPILSNKAVGQVVDEKKLDEDKLRQLLN
DALSNPKQESSSNRLIDFLGSTEYFKQPPIHPVIMLCTQTASPENIVRLSLILSRSNICQ
TNSVSGTIMQLAIGLLASIFTDIYKKNTDNYRISCAINCLLVYLGAIKPEKDSEDWIDCS
PTTTTTSGSNVKFNIQHYLRLTKTLIDYFGPQLIPSVCNCLTVLLSEQRKKEIHSNSSLI
HGTHLRDDIIDSLEKQMNSMNLKR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggtagttgggtcgaacggatataacggatggactgttagtttcgcaaatcatgccctg
aagctagataaagctgctgatgcaaatgatattgtttctgcactagcttccaacccaaat
gcagagtgtttgaacctcagcggaaacacacttgggatagacgcagctaaacctatcggt
attgctttggaaaagaaccgcttcattaagcgttgcttgtttaacgatctgtttacaggt
cgccttaaatctgaaatagcaccagcactaaagcatttgagtaatggtcttatggtttcc
aagtctcaaatagttgaattggatctcagtgacaacgctttcggtccaaacggggttgtt
ggtataactgatttgctggcgagcaatacttgtcacactcttgagatactgcgaatgaac
aaccaaggtcttggccatgaaggatgtcgatatcttgcagaggccttagaagaaggaaga
tgtttgtcaaagaatcaaggactactcctaaaaatattttcgggaggaagaaatcgttta
gaaaatgttggagctcaaatgctttctaaggttttctgtgatatggggtccttagaagag
ctttccctttatcaaaatgggattggaattcatgggatagacggtattttgtcactggtg
aaaataattaaatctagtccgaatttacgagtgttaaatttgtcggataattcacttact
ccacgtggtggcgaagcaattgcacgtgccttaccttcagtagtcaatctagaggaactt
tatttgagtgattgtatactccgatcaactggtgtaaaggcacttgcttccgcttttgaa
gatcccgacaccactcctaatttaagagttttaaatctaaccggaaacgaaatcaaactg
tctgctggaattaatttaattctatcgctgggcaataaatcccatttagaattactagac
ttgaatgctaatgaattcggtcgctctggtgttcgatcaataattcaaacacttgattca
gtcggacttttgcacacattacccaatccaaatgacaaagatttatcaagtatatcagtt
gttgaggaatcctatttatgggcatttgacgaagatcaaggttcagatcaagaaggcgaa
gatgatgaaaccaacgaaggggaggaggaggatgttgataataatgatgcagaagaatat
gatgattctagaagtcgatatggtgatgatgatgatgaacgagaaaatcaaactgataca
acttcagaccaaaaggagagtgttaatttcagttttcgtgaggcattttcaaaatttgga
accattggtggtggtggttgtctaaccccaaaaaatgaaaatattcaaataaataaacct
ggaccttttggtacacaatcacttggtttgttttctggaatttcacctcaaaacactgat
acaacagatgccggtgtgattcgttcaaaactatggccttcttcaggtttattcaatttt
ggtgatagtgcaaacacaaaaagaaatttgttttctccaccaattctatcgaataaggct
gttggtcaagttgttgatgaaaagaaattagatgaggataaacttagacaacttttaaat
gatgcactttctaatccaaaacaagaatcaagtagtaatcgtttgattgactttcttgga
tctactgaatactttaaacaaccaccaatacatcctgttataatgttatgcacacaaaca
gcttcaccagagaatatagttcgtttaagtttaatattatcacgtagtaatatatgtcaa
acaaattctgtatctggtacaattatgcaattagctattggtttattagcttcaatattt
acagatatttataaaaagaatacagataattatcgtattagttgtgcaatcaattgtcta
cttgtttatttaggtgctattaaaccagaaaaagatagtgaagattggatagattgttca
ccgactactactactactagtggtagtaatgtaaaatttaatatacaacattatttacga
ttaactaaaacattaatcgattattttggaccacaattaataccaagtgtatgtaattgt
ttaacagttctattatcagaacaacgtaaaaaagaaatacattcaaattcatcattaatt
catggtactcatttacgagatgatattattgattcattagagaaacaaatgaattcaatg
aatttgaagcgttaa
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