Schistosoma mansoni: Smp_166400
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Entry
Smp_166400 CDS
T01095
Name
(RefSeq) putative dead box ATP-dependent RNA helicase
KO
K03257
translation initiation factor 4A
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_166400
03012 Translation factors [BR:
smm03012
]
Smp_166400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_166400
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Smp_166400
mRNA cycle factors
Stress granule specific factors
Smp_166400
Translation factors [BR:
smm03012
]
Eukaryotic type
Initiation factors
eIF-4
Smp_166400
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smp_166400
Exosomal proteins of bladder cancer cells
Smp_166400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA_30
Flavi_DEAD
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-GeneID:
8352958
NCBI-ProteinID:
XP_018649628
LinkDB
All DBs
Position
2:2107327..2119826
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AA seq
342 aa
AA seq
DB search
MESDNNINSHYNNVCDSFDRMNLKENLLRGIFAYGFEKPSAIQQRAIIPSIEGRNVIAQA
QSGTGKTATFSIAILQQICTNDPRCQALVLAPTRELAKQIQMVVLALGDYMNISCHVCIG
GTQVSTDIEQLQLGQQIVVGTPGRVLDMISRGYLHTQTIKCFVLDEADEMLSLGFKDQIQ
EIFRSLNSSVQIILLSATIPNEVLEISKHFMRNPVRILLKQEELTLDGIRQFYVNVEQEE
WKLETLCDLYQTITITQAVIFCNSRRKVEWLTNELIERDFIVSAMHGEMEQIERDNIMTA
FRSGSSRILISTDLLSRGIDVQQISLVINFDLPTNLESYIHR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacaacaacataaacagccactataacaatgtatgtgattcatttgatcgt
atgaatttaaaagaaaatcttttacgtggaatatttgcatatggttttgaaaaaccttct
gcaatacaacaaagagctataattccatcaattgaaggacgtaatgtcatagctcaagct
cagtcgggtaccgggaaaacagccacgtttagtattgccattttgcaacaaatctgtacg
aacgatccacgttgtcaagccttagtattggctccaactagggaactagcgaaacaaatt
caaatggttgttctagcacttggtgattatatgaatattagttgtcatgtttgtattggt
ggtacacaagtatccactgatattgaacaattacaattaggtcaacaaattgtagttggt
acacctggacgtgttttagatatgattagtcgtggttatttacatacacaaacaattaaa
tgttttgtattggatgaagcagatgaaatgcttagtttaggatttaaagatcaaattcaa
gagatatttcgatcacttaattcatctgttcaaatcattttattatccgcaacaatacca
aatgaagtattagaaatatctaaacattttatgcgtaatccagtacgtatattattaaaa
caagaagaattaacattagatggtatacgtcaattttatgttaatgttgaacaagaagaa
tggaaattagagacattatgtgatttatatcaaacaataacaataacacaagcagtaata
ttttgtaattcacgtagaaaagttgaatggttaacaaatgaattaattgaacgtgatttt
attgtatcagcaatgcatggtgaaatggaacaaatagaacgtgataatattatgacagca
tttcgtagtggttcaagtcgtatattaatttctacagatctattatcacgtggtattgat
gtacaacaaatatcattggtgattaattttgatttaccgacaaatttagaaagttatata
catcggtaa
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