Schistosoma mansoni: Smp_166940
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Entry
Smp_166940 CDS
T01095
Name
(RefSeq) excision repair helicase ercc-6-related
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_166940
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
Smp_166940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
DEAD
TPR_2
Motif
Other DBs
NCBI-GeneID:
8343396
NCBI-ProteinID:
XP_018650145
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Position
2:16652575..16662231
Genome browser
AA seq
1299 aa
AA seq
DB search
MSQENEFSSLVTQARLKCEEGNFHESLKLCQDAYAINPSSSLMRKIVRLQNLICQDTKEN
IPIAPKQSDNPLKEAAKYSVCESEKYVSPGNITDSTNLLKEAYLCVPSAEIESNIGQIKP
AYPATYTSRTSNTKETSGKEKLYDGIQFALIDKAKLLYQSGDYVECLRLLKKAYNLKQCD
KVKRKIERIENYLNENGIPVDHYDHELHTNNDTAVDHDDEKQPPKLTDDLVEIADGFSVP
KLLYDKLYDYQKYGVKWLWSLHQRNSGGILADDMGLGKTVQVIAFLSGLFVSSKFSCTVL
IVMPVSVLVTWEAELKRWAPGLRVIVFHDNSRADRLKSLVSVQRHGGILLTTYGTLVSSI
RDFDILARMGKEFHWTYLILDEGHKVKNSSAKTTKAAQAIYADHCILLTGTAVQNNLKEL
WSLYNVTHRGRLLGTQKTFSIEYDKPITRGRERDATRAEKVHGQLMAESLRRIIDPYFLR
RTKSEVLSKQYNMNAVVPMKDKMPRKTEIVLWVYLSSIQESTYRDFLQLDNVKELLMQRT
KRSPLMELVILKKLCDHPRLLSTEQCLNLNLNYDDGNSKGDNFHINEIVSHKIHFPPSEQ
LIKESGKFLFLHCLMKQFLLELQSNPQRDSPRTLIFSQSIKFLDMAEKVILDIKCPVNNH
TFGDDNIHYPTQHRILRLDGRTAKVCDRLSIINKFQNDKSYTVMLLTTQVGGVGLTITSA
NRVIILDPSWNPAVDSQAVDRAYRIGQKLDVVVYRLITCATVEEKIYRRQIFKDSVIRQT
TSTGQNKTDLDPYRYFSRQELVELFSLGDTRISETKRQLDMLHDGSDRWSDSSISPHLKF
LSSDALKHVVYGLSFHDLMFSKESINDGAIDTDHEKLYVMNRCVAAERAIAEECAAEGRV
IGKEMPAVTMIQAESTVKSLPTHLANLTLQNKLPPSSHHNHDSRFTNHVPLNQLFKPSRS
DTHRPMFNRPVTSFNNPHTNIIHTSSNIKHLGNNISPNSSVPLAFTTAEHQSVDRSSPVN
TDRVNRPLSPKLGRQLQDVTEVVEVRQKYDNESLEIRNSPSDNLSDNECIDTPSSAPVAD
IECITIEDSIAQSLREISITQKTPSRSHDNEKSDKESNILKTPLHHFRTSLNSRSSFAPF
NSNFYRSTPLSSRKSTKIPPKEHFEQCGQELNEDLGDVKSPTDFDPAQNYIHMDISMDIN
EDDLANTVNMKSIQQVLAKSGILNVTDSNNINETEEGEPMSDSIEIHKSPNHQELNSVSE
ENAFTKSLSDSEVAVDSYISHQSVEKTHIDDTDIIESSF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagagaatgaattttcatcacttgtcacccaagcgcgtctaaaatgtgaggaa
gggaattttcatgagtcactcaagctttgtcaggatgcctacgcaataaatccttcctct
agtcttatgcgaaaaattgttcgtcttcaaaatttaatatgccaagataccaaggagaac
atcccaatagctcccaaacaatctgacaatcctttaaaagaagctgctaagtactctgtt
tgtgagtctgagaagtatgtatctcctggcaacataactgacagcactaatcttctgaag
gaagcgtatctatgtgttccatcagctgagattgaatcaaatattgggcaaattaaacca
gcatatcctgcaacctatactagtcgtacttcaaacacgaaagaaacttcggggaaagaa
aagctttatgatggtattcagttcgctctaattgataaagcaaaattgttatatcaatct
ggagactatgttgaatgccttcgtcttcttaaaaaagcctacaaccttaagcaatgtgat
aaagtaaagcggaaaattgaaaggatcgaaaattatttgaatgaaaacggaattcccgtt
gatcactatgatcatgagttgcacactaataatgatacggcagttgaccatgatgatgaa
aagcagcctcctaaactcactgatgatttggtcgaaatagctgatggattcagtgttccc
aagttattatatgataaattgtatgattatcaaaagtacggtgttaaatggctttggagt
ttgcatcagagaaattctggcggcatattagctgatgatatgggactaggtaaaacagtt
caggttattgcttttctttctggcctattcgtatctagtaaattttcttgcacagtgttg
attgtgatgccagtcagtgttttggttacttgggaagctgaactaaaaagatgggcacca
ggacttcgtgttattgtttttcatgataacagtcgagcggatcgtcttaaaagtttggta
tcagtccaacgacatggtggtattctacttacgacatacggaacacttgtttccagcata
agagattttgatattcttgctagaatgggtaaagaatttcattggacttatttaatattg
gacgaaggacacaaagtcaaaaattcatctgctaagacgactaaagcagctcaagcaatt
tatgcagatcattgtattctcctaactggtactgctgtacaaaataatctcaaagaattg
tggtctctttacaatgtgactcatcgtggtcgactcctaggtacacaaaaaactttttct
attgaatatgataaaccaataactcgtggacgcgagagggatgctactcgtgctgaaaaa
gtacacggtcaattaatggctgaaagtttacgacgtataatagatccatatttcttaaga
cgtacaaagtctgaagttttatctaaacagtataatatgaatgcggttgtaccgatgaaa
gataaaatgccacgtaaaacagaaattgtattatgggtttacttaagctccatacaagaa
tccacatatcgtgattttttacaacttgataatgtaaaagaattattaatgcaacgtaca
aaacgttcaccattaatggaattggtaattttaaaaaagctctgtgatcatccacgtctt
ttgtctactgaacaatgtttaaatcttaatttaaattatgacgatggcaatagcaaagga
gataattttcatattaatgaaattgtttcacataaaatacattttccaccatcagaacaa
ctgattaaagaatctgggaaattcttgtttctgcattgtttgatgaaacagtttttactt
gaattacaatcgaatccacaacgagattcgccgcgtacgttgatattttcacaaagtata
aaatttcttgatatggctgaaaaagtcattctggatataaaatgtcctgttaataatcat
acatttggtgatgataatattcactatcctacacaacatcgtattttacgattagatggt
cgtactgcaaaagtatgcgatcgtctaagtataattaataaatttcaaaatgataaatct
tatacagttatgctgttaactactcaagttggtggtgttggactgacaattacatcagct
aatcgtgttatcattctcgacccaagttggaatccagctgtagactcacaagctgttgat
cgtgcgtacaggataggtcaaaaattagatgtagttgtataccgattgattacttgtgca
actgttgaagaaaagatttatcgtcgtcaaatattcaaagattccgtaattcgccagaca
acgtcgacaggccaaaacaaaacggacttagatccttaccggtatttcagtcgtcaagaa
ctggttgaattatttagtctgggagacacacgtatttctgaaactaaacggcagctagat
atgttacacgatggttcagataggtggtctgatagttcaattagcccacatttaaaattc
ctcagtagtgatgcactaaagcatgttgtatacggtttatcgtttcatgatttaatgttt
agtaaagaatctattaatgatggagctattgatacagatcatgagaaattatacgttatg
aatcgttgtgttgcagctgaacgcgccatagctgaagaatgcgctgctgaaggaagagta
attggtaaagaaatgccagcagtaacaatgatacaagcagaaagtactgtaaaatcatta
ccaacacatttggcaaatcttactttacaaaacaaattaccaccttccagccaccacaat
catgacagtcgttttactaatcatgtaccattaaatcaattgttcaagccttccaggtct
gacactcatagaccaatgttcaatagaccagtaacatcatttaacaatccacacactaac
atcattcacacttcatctaatattaaacatcttggtaacaatataagtcccaattcaagt
gtaccattagcattcactactgctgagcaccaatcagttgatcgaagtagtcctgtaaat
actgacagggtaaatagacctctctcgccaaagctgggacgtcagttacaagatgttact
gaagttgtagaagtacggcagaaatatgacaatgaatctctggaaatcaggaattctcct
agtgataatctatcggataatgagtgcatcgatacaccttctagtgcaccagttgctgat
atagaatgcataactatagaggattcaattgcacaaagtttgcgagaaataagtataact
cagaaaactccatcaagatctcatgataatgagaaaagcgacaaagaatcaaatatttta
aaaactccacttcatcattttcgaacttcgttgaattcgagatcatcatttgcaccattc
aattcaaatttttatcgttctactccattatcttcaaggaagtcaacgaaaattcctcct
aaggaacactttgaacagtgtggacaggaattaaacgaagatctcggtgacgtcaaatca
ccaacagattttgatcctgctcagaattatatacatatggatattagtatggacatcaac
gaagatgatttagctaacacagtaaatatgaagtcaattcagcaggtacttgcaaaatct
ggtattttaaatgttactgattcaaacaatataaatgaaactgaggaaggtgaacccatg
tcagattcaattgaaatccataaatctcccaatcaccaagaacttaattcagtttcggaa
gaaaatgctttcactaaatctctaagtgattctgaagttgccgtggactcttacataagt
catcagtctgttgaaaaaacgcatattgacgataccgatattattgaatctagtttctga
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