Schistosoma mansoni: Smp_167770
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Entry
Smp_167770 CDS
T01095
Name
(RefSeq) photoreceptor-specific nuclear receptor related
KO
K08546
nuclear receptor subfamily 2 group E member 3
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_167770
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smm03310
]
Smp_167770
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
Smp_167770
Nuclear receptors [BR:
smm03310
]
2. Hepatocyte nuclear factor 4 like
2E. Tailless like receptor
Smp_167770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
8350092
NCBI-ProteinID:
XP_018655311
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Position
W:complement(46839165..46855213)
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AA seq
567 aa
AA seq
DB search
MNMQHSYHDEIQRSQSLCSRIENSPIDNNISAQAIENNIYSLVSSLRDKSDISLLPMNQF
TAPPSVQSTTGINDIYNFSSLLSNSTLWLSHLMKNSQLSMPPSINSAIWSNTSSDVNHFT
EETTNSNWHSDSKNNNRVTKSYEYDITFSNNGFQPISNRAFNPIMINKQSTQADLSVEHL
NLSEQSIYDRMDAYKLPKPDSTSEQVLTDGINELTSKFRDIKRVGHNGLYCIVCGDISSG
KHYGILACNGCSGFFKRSVRRKLIYRCQAGNGLCIIDKAHRNQCQACRMKKCIRMGMNKD
AVQNERQPRKSSHFAAQDEKETRDLLLNRTIQQFEEYMKAYSLQSSLTTVKCNEINNVIS
NDKSLKKSSYLASPNTGTISDDVKSSFSAFPVCTKNDLDKWFHVQSKDQLQYSNEILSQL
KSDFANQTNSFIDYIFESNNSVTRYPGSQAIIQKMFSASFYPLIEKLLNWVAGIPHFDSL
SKQDQPDTIELNLLKMILLFNVNPLEISRSESIDYIQRQLRLQLTQYEWITHPNNISRCN
QLLLLNASIQKLDKTIFKDNIFIENIS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcagcattcatatcatgatgaaatacaacgtagtcaatcactatgcagcaga
atagaaaactcaccaattgataacaatatatctgcacaagctatagagaacaatatctat
tcattagtttcatctcttagagataaatcagatatatctttactaccaatgaatcaattt
actgctccaccttcggttcagtcaactacaggaataaacgatatttataacttttcatct
ttactttccaattccactctatggttatctcatttaatgaagaacagccaactatctatg
cctccttcaataaattcagccatatggtcaaacactagttcagatgttaatcatttcaca
gaggaaacgacaaattccaattggcattcagattctaaaaataataacagagtaacaaaa
agttatgagtatgatattacgttttcaaataatggttttcaaccaatttctaatagagcg
tttaatccaataatgataaacaaacaatcaacacaagcagatctatcagttgaacatcta
aatttaagtgagcaaagcatatatgaccgtatggacgcatataaattacccaaacctgac
tcaacttcagaacaagttttaactgatggaataaatgaattaacctcaaaatttcgtgat
attaaacgtgtcggtcataatggattgtattgtattgtttgcggtgatatcagcagtgga
aaacattatggtattttagcatgtaatggttgcagtggtttttttaaacgatctgtcagg
cgaaaacttatatacagatgtcaagctggtaacggtttatgtattattgacaaagctcac
agaaatcagtgtcaagcatgtcgaatgaaaaaatgtatccgtatgggtatgaataaagat
gctgttcagaatgaacgccagcctagaaagagttcacactttgctgctcaagatgaaaaa
gaaacgagagacttattactaaatagaacaatccaacaatttgaagaatacatgaaagcc
tacagtttacaatcatcattaaccacagtcaagtgtaatgaaattaataatgtaatttca
aatgacaaatcactcaaaaaaagttcatatttagcaagtccgaatactggcaccatatca
gatgacgttaaatcttcctttagcgcctttccagtatgtaccaagaatgatctcgataaa
tggtttcatgttcaatcaaaagatcagcttcaatattcaaatgaaattttgtctcaacta
aaatcagactttgcaaatcaaactaattccttcattgattacatatttgagtcaaataat
tcagttacaagatatcctgggagtcaagctataatacagaaaatgttctcagcatcattt
tatcctctgattgaaaaacttttaaactgggtagcagggattccacattttgatagccta
tctaaacaagatcagcctgataccattgaattgaacttattgaaaatgattcttctcttc
aatgtgaatccattagaaatatccagaagtgaaagtattgattatattcagagacaatta
agattacaattaacccagtatgaatggatcactcatccaaataatatatcaagatgtaat
caacttctacttttgaatgcatcaatacaaaaattggataaaacaatatttaaagacaat
atttttattgaaaacatttcctga
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