KEGG   Schistosoma mansoni: Smp_169060
Entry
Smp_169060        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
smm  Schistosoma mansoni
Pathway
smm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Smp_169060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smm03041]
    Smp_169060
Spliceosome [BR:smm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    Smp_169060
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta TMEM219 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MTRES1_C WDR90_beta-prop_4th PRP4 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SCAP Ge1_WD40 Beta-prop_Nup120_160 NBCH_WD40 WD40_RFWD3
Other DBs
NCBI-GeneID: 8347983
NCBI-ProteinID: XP_018650181
LinkDB
Position
2:complement(17257391..17298756)
AA seq 875 aa
MKSCWGLFGLALRISLYERPNGLLKSFSYVNRASTQKLFPMHLIYLQKHTGHRHVGQDSD
SSDDELADDEDEDPDELDPYYSEDMAFSPNFRQISSYVKSLRFDKIIRVGLDITRSAADN
AFFSNRCRLNGEKLFKMGTTVYIGDKLDIVIDDTEGPVGKRLYYVKLFLVGRPPLALFSL
FLLLCAVGLIVLDVLVNKFPPNNPDVEKHWNKLLLELSGLEFCIINSSNARLMAESYASA
HVLRRLDDMESDNMIISHAIDLPLLIYPNEEFVYNMSYLLIAKMHGRHIGIKGPLALQKL
NISFLVPSVQNENRKGKEPNFRPVHLKTCVTFTATPAIFPPILLPPTCEPNLMGSTSSIT
SFLEWSKQTDVFDSNRCHGRTRIQTDFHVSPHLLPRLEKFVLSTLGTLPLDEVDKNAQEA
LNQLELRKKARLIQVSTEDSEVRAYLRQLGEPVCLFGEDGADRRERLRMILAVSGGPAQR
PPLTDTVKSSTGTGTSINRLGENISTDTVGDDTTVWYHQGPNTLAEARLWISEFSLTRAK
VRLDRARNYFNNVPAPQRKAKLQEYHKVLRNTNLLCSQVGDIRPLSMCRFSPDGKQLATS
SWSGLCRLWSIPDCNLVMNLRGHTAPTCAIVWHPQAGLQSEQQLALASSAQDGSVKLWSL
DNEEPLADIEGHAPHRVSRLAFHPSGRFLATTCFDHSWRLWDLEACEEILHQEGHSKPVY
DVVFHPDGSLALTTGLDGYARVWDLRTGRCIMFLEGHLEELLGADVADNGYHAATSSADN
TVRIWDLRQQQAIYVIPAHTSVVSSVRFESRNCSYIVTSSFDKTTKIWGHPIWTPIKTLE
GHNSKVVYADISPDNKYIATCSHDLTYKLWSKEAN
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgaaatcttgttggggtttatttggtttggcattacgcatatcattatatgagagacct
aatggattattgaaaagcttttcttacgttaatagggcatcaactcaaaagctctttcca
atgcatttaatatatcttcagaaacacaccggacatcgtcatgttggacaagattctgat
tcttcagatgatgagttagctgatgatgaggatgaggatcctgatgaattagatccatat
tattcagaagatatggcattcagtccaaattttcgacaaatttcatcatacgtcaaatct
ttacgttttgataaaattattcgtgtgggtttagacatcactagaagtgctgctgacaat
gcctttttttctaatcgatgtaggctaaatggggaaaaactgtttaagatgggtactaca
gtttatataggtgataagcttgatatagtgattgacgatacagaaggacctgtcggtaaa
agattgtattatgtcaagttatttttggttggtcgaccacccttggctctattttcatta
tttctattattatgtgcggttggattaattgtattagatgtactagtgaataaattccct
cctaataatcctgatgttgaaaaacattggaataagttattactagaattatcaggatta
gaattttgtattattaattcatcaaatgcaagattaatggcagaatcttatgcaagtgca
catgttctacgtcgattggatgatatggaatctgacaacatgattatttcgcatgcaatc
gatctacctttattaatatatcctaatgaagaatttgtttataatatgtcatatctacta
attgctaaaatgcatggacgtcatattggtattaaaggtcctttggcattgcaaaaactg
aacatatcttttctcgtaccatcagttcaaaatgaaaatcgtaaaggaaaagaaccgaac
tttcgacctgtacatttaaaaacttgtgtgacttttactgctacaccggctattttcccg
ccaatactgttacctccgacttgtgaaccaaacttaatgggtagtacttcctcaataact
agttttcttgaatggtccaaacaaactgatgtttttgactcaaaccgttgtcatggacgg
acacggatacagactgactttcatgtttctcctcatcttttaccacgtttggaaaagttt
gtgctttccacattaggtactttacctttggatgaagtggataaaaacgctcaagaagcg
ttaaatcaattagaactacgtaaaaaggctcgtttaatacaagtatccacagaagactct
gaagtgagggcttatctacgccaacttggtgaacctgtctgtttatttggtgaagatgga
gcagaccgaagagaaagactacggatgattcttgcagtgagcggtggtccagctcaaaga
ccacctttaacagatacagtaaaatcatcgactgggactggtacatctattaatcgactt
ggtgaaaatatttctactgatactgtcggagatgatactacagtgtggtaccatcaaggt
ccgaatactcttgcagaggctcgcctatggattagtgaattttccttaactcgagctaaa
gtacggctggatagagctaggaattatttcaataatgttccagcacctcaacgcaaagct
aaactccaagaatatcataaggttttgcgaaacacaaatttgctatgcagtcaagttgga
gatattcgaccattaagtatgtgtcgcttttcacctgatggtaaacaattagctacatca
tcttggagtggtctgtgtcgtttatggtctatacctgattgtaatttagttatgaattta
cgtgggcatactgcaccaacttgtgctattgtttggcatcctcaagctggtctccagtcg
gaacaacaattggcacttgccagttcagctcaagacggaagtgttaaactatggagttta
gataatgaagaacctttggccgatattgaaggtcacgcacctcacagagtatctcgctta
gccttccatccttctggacgtttcctggcaactacgtgcttcgatcactcatggcgctta
tgggatttagaggcttgtgaagaaattttacaccaagaaggtcattccaagccagtttat
gatgttgtttttcaccctgatggttccttagctctaaccaccggtttggatggatatgct
cgtgtttgggacttacgaacaggtcgttgtattatgtttctagaaggccaccttgaagag
ttgctgggcgcagatgtagctgataatggttatcacgcagccacttctagtgcagataac
accgttcgtatttgggatttacgacaacaacaagcaatttatgtaataccagctcacact
agtgttgtaagcagcgtacgatttgaatcacgcaactgtagctatattgttaccagttcg
tttgataaaacaaccaaaatttggggccatcctatctggacacctatcaaaacgctcgaa
ggacataacagtaaagttgtttatgcagacatttcaccagacaataaatacattgcaacc
tgttcccacgacctgacttataaactgtggagtaaagaagcaaactaa

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