Schistosoma mansoni: Smp_169300
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Entry
Smp_169300 CDS
T01095
Name
(RefSeq) transcription initiation factor tfiid 55 kD subunit-related
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
smm
Schistosoma mansoni
Pathway
smm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smp_169300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_169300
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_169300
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Smp_169300
Coactivators
SAGA/TFTC/STAGA complex
Smp_169300
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
Smp_169300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
Motif
Other DBs
NCBI-GeneID:
8347722
NCBI-ProteinID:
XP_018652831
LinkDB
All DBs
Position
5:complement(8959396..8970166)
Genome browser
AA seq
490 aa
AA seq
DB search
MTDTVAAQNLAADIDAGIPFKKILPFKPDMRHTIVRYNGQVYQGQIMDLPCIIESLKTTD
KKNFYKTANICQMMICTQGDETGPLRGTAAYLRQSSWVHAIKRLISEFQFLHGITPPLKN
VLHRRFRKTRRKRFVDMPKIEKEVKQLLRADLQAVNVKWEVIWTDPPAPVIRSNANNNKS
GLSNNETDNSNNVQSGNQQRTADDELEDEEDEDGGRAYAIDHRDVFGEISSSSIGSSSDS
DDNSSSSSHRGNGGGGADRHRHEGGRGRERLGSSDHPSDNDEHADVGDGKVKDYNQSSAR
NQTTDNSALVTNQSTSETVYNKLKSTIITSTTNDLSTDVISATTSIIPVDNLKDELAAEL
LLSDSGDEQADSVGVVDVDDDDLQTSVVTELIANSTNKNSINMQHLHNTTINNDDCIVTG
TITDLDNLVDVVVNDGNDVDEDDDDEERNNIIHRGGELLDDNSFMGFTNTTTQNYYNDVF
NADIDDEDTS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacagttgctgctcaaaatctggcagctgatatcgatgctggcatacctttc
aagaaaattttaccgttcaagcctgatatgcgacatacaattgttcggtataatggtcaa
gtttaccaaggtcagattatggatctcccatgcataatagaatcgttgaagactacagat
aaaaagaatttctacaaaacagccaatatctgtcaaatgatgatctgtacccaaggtgat
gaaactggtccactacgtgggactgctgcatatttaagacaatcgtcctgggttcacgca
ataaaacgtttgatatcagaatttcaatttcttcatgggataacaccaccattaaaaaat
gtcttacatcgtcgatttcgtaaaacgcgtagaaaacgttttgttgatatgcctaaaatt
gagaaagaagtcaaacaattattgcgtgctgatttacaagctgttaatgtaaaatgggaa
gttatatggactgatccacctgcgcctgtaatacgatcgaatgcaaataacaataaatca
ggtctatctaataatgaaaccgataatagtaataatgttcaatcaggcaatcaacaacgt
acagctgatgatgaattagaagacgaagaagatgaagacggtggacgagcatatgcaata
gatcatcgtgatgtatttggtgaaataagcagtagcagtattggttcttcgagtgatagt
gacgacaacagtagtagtagcagtcatcgcggcaacggtggtggcggcgctgaccgtcat
cgtcacgaaggaggcagaggaagggaaagacttggaagtagtgatcatcctagtgataat
gatgagcatgctgatgttggtgacggcaaagtaaaggattataatcaatcatctgcacga
aatcaaactactgataatagtgctttagtaactaatcaatcaacttcagaaactgtatat
aataaactcaaatctaccattatcacttcgacaactaacgatcttagtactgatgttatt
tctgctactacttctatcattcctgttgataatcttaaagatgaattggctgcggaactg
ttactgtcggattccggtgatgaacaagctgatagtgttggtgttgttgacgttgatgat
gatgatctacaaacttctgttgttactgaattaatagcaaattctaccaataaaaattct
atcaatatgcaacatctccataatactacaataaataatgatgattgtattgtaactggt
accattactgatctagataatttagtggatgtggttgttaatgatggaaatgatgttgat
gaagatgatgatgatgaagaacgtaataatattatacatagaggtggtgaattattggat
gataattcatttatgggtttcacgaatacaacaacacaaaactattataatgatgtattc
aatgcagatattgatgatgaagatacttcgtaa
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