KEGG   Schistosoma mansoni: Smp_169640
Entry
Smp_169640        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K14308  nuclear pore complex protein Nup54
Organism
smm  Schistosoma mansoni
Pathway
smm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Smp_169640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_169640
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Smp_169640
SSDB
Motif
Pfam: Nup54 Rap-GAP_dimer
Other DBs
NCBI-GeneID: 8355366
NCBI-ProteinID: XP_018652167
LinkDB
Position
4:19244678..19264596
AA seq 605 aa
MSLFGSPKLFGFSQPTTSAVSAAPTLGFGLQPPLASTTTPFGGFGLGSNVSTMSSGLFQA
PVAKTTNTTFPGFGQNTTPFQGFNLNTPKTSTGLFGSTFSAPTTSTQPGLNLFGAQFGQQ
ASQNTGFSFTQPTQSLFNTPKTQGFGFDQSLPVAAQQQQQQQQVQVAQQNTVDAFFASLS
QPMLFGDERDSVIARWNQLQAMWGTGIGYSAVGIVNYTSENTFARLKSIGYNVLPTSTDA
DGLVCLYIGRPFSEVTNQRQAVQDILFRLLGGRPNLQLVVEEIRPCAEAEDSTEVILKVV
ERLATGTTSTISASELAKYLSSPSVAPQLQSQLCVNRLIPEISPSASQIVAYNENPPAGF
DRLIWQQACLDNPHPNRMIPVPFIGFSDLKRRKCDQLAYGEQQSSMIKYITELVSKLRTG
QLGMSQRLIQLKRKQIELSHRVLKVLKNQEVHRRCGFAISVEEEGMRCELERIWSELVAP
RGLRIRFQEALSTLRNSSEFNKRDKENIGSVYKGVHPLESGDGYPSTWSLDPDSLNELKE
YLTQRHNGIREMQRLITEMTNNLKVMEDNPITNINPSVHKSPFVNSPPIGGMHKVSFAVN
SRIVH
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagtttgtttggatctcccaagttgtttgggttttcacaaccgacgacaagcgctgtt
agtgcagctccaactcttggttttggactacagccaccactcgccagtacaacaacaccg
tttggaggctttggtttggggtctaatgtttcaactatgagttcaggattatttcaagcg
ccagtggcaaaaacaaccaatacaacctttcctggattcggacaaaatacaactcctttt
caagggtttaacctaaacactccgaaaacatccactgggttgtttggttctactttttct
gctcccaccactagtactcaaccgggtttaaatctatttggagctcagtttggtcaacaa
gcatctcagaatactggatttagcttcacacaaccgactcaaagtttgttcaacacccca
aaaacgcagggtttcggttttgatcaaagtcttcctgtagctgcccagcagcagcagcaa
caacaacaggtacaagttgcacaacagaatacagtcgatgctttttttgcttctctatct
caacctatgttgtttggtgatgaacgtgattcagttatagctcgttggaatcaactacaa
gcaatgtggggtactggtattggttacagtgctgtgggtatagtgaattatacatcagag
aatacatttgctcgattaaaatctattggatacaatgttttgcctacaagcacagatgct
gatggacttgtttgtttatacattggtcgtccattctctgaagttacaaatcaacgtcaa
gctgtacaagatattttatttagactattaggtggtcgtcctaatttacaactggtggtg
gaagaaattcgtccatgtgctgaagctgaagatagtactgaggtcatattgaaagtcgtg
gaacgattagctactggtacaacatcgactatatctgccagtgaacttgcaaagtattta
tcaagcccatcagttgcgccgcaacttcaatcacaattatgtgtgaaccgtttaattccg
gaaatatctccgtctgcttcacagatagtcgcatataatgagaatccaccagctggtttt
gacagactaatatggcaacaggcctgtctcgacaatccacatcctaatcgtatgattcca
gttccatttattggattttctgacttgaagcgacgtaaatgtgatcaacttgcttacggt
gaacaacagagcagtatgattaagtatatcactgaattggtgtctaagctacgcactggt
caacttggtatgtcacaacgacttattcaattaaaacgcaaacaaattgaattaagtcat
agagtgttgaaagttctcaagaaccaagaagttcatagacgatgtggatttgctataagt
gtagaagaagagggaatgcgttgtgaacttgaaagaatttggtcggaacttgtcgctcca
agaggtttacgtattcgatttcaagaagcattgtctacacttcgtaattcttctgagttt
aacaaaagagataaagaaaatattggatcggtttataaaggtgttcatccattagaatct
ggagatggttatccgtcaacttggagtttagatccagattcgttaaatgaactgaaagag
tatttaactcaacgtcataatggtattcgtgaaatgcaacgacttatcactgaaatgaca
aacaatttgaaagttatggaagataatccgataactaatattaatccatctgtacataaa
tcaccatttgtaaactctcctccgatcggtgggatgcacaaggtgtcgttcgcagttaat
tctcgtattgttcattga

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