Schistosoma mansoni: Smp_169640
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Entry
Smp_169640 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_169640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_169640
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_169640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
8355366
NCBI-ProteinID:
XP_018652167
LinkDB
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Position
4:19244678..19264596
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AA seq
605 aa
AA seq
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MSLFGSPKLFGFSQPTTSAVSAAPTLGFGLQPPLASTTTPFGGFGLGSNVSTMSSGLFQA
PVAKTTNTTFPGFGQNTTPFQGFNLNTPKTSTGLFGSTFSAPTTSTQPGLNLFGAQFGQQ
ASQNTGFSFTQPTQSLFNTPKTQGFGFDQSLPVAAQQQQQQQQVQVAQQNTVDAFFASLS
QPMLFGDERDSVIARWNQLQAMWGTGIGYSAVGIVNYTSENTFARLKSIGYNVLPTSTDA
DGLVCLYIGRPFSEVTNQRQAVQDILFRLLGGRPNLQLVVEEIRPCAEAEDSTEVILKVV
ERLATGTTSTISASELAKYLSSPSVAPQLQSQLCVNRLIPEISPSASQIVAYNENPPAGF
DRLIWQQACLDNPHPNRMIPVPFIGFSDLKRRKCDQLAYGEQQSSMIKYITELVSKLRTG
QLGMSQRLIQLKRKQIELSHRVLKVLKNQEVHRRCGFAISVEEEGMRCELERIWSELVAP
RGLRIRFQEALSTLRNSSEFNKRDKENIGSVYKGVHPLESGDGYPSTWSLDPDSLNELKE
YLTQRHNGIREMQRLITEMTNNLKVMEDNPITNINPSVHKSPFVNSPPIGGMHKVSFAVN
SRIVH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggatctcccaagttgtttgggttttcacaaccgacgacaagcgctgtt
agtgcagctccaactcttggttttggactacagccaccactcgccagtacaacaacaccg
tttggaggctttggtttggggtctaatgtttcaactatgagttcaggattatttcaagcg
ccagtggcaaaaacaaccaatacaacctttcctggattcggacaaaatacaactcctttt
caagggtttaacctaaacactccgaaaacatccactgggttgtttggttctactttttct
gctcccaccactagtactcaaccgggtttaaatctatttggagctcagtttggtcaacaa
gcatctcagaatactggatttagcttcacacaaccgactcaaagtttgttcaacacccca
aaaacgcagggtttcggttttgatcaaagtcttcctgtagctgcccagcagcagcagcaa
caacaacaggtacaagttgcacaacagaatacagtcgatgctttttttgcttctctatct
caacctatgttgtttggtgatgaacgtgattcagttatagctcgttggaatcaactacaa
gcaatgtggggtactggtattggttacagtgctgtgggtatagtgaattatacatcagag
aatacatttgctcgattaaaatctattggatacaatgttttgcctacaagcacagatgct
gatggacttgtttgtttatacattggtcgtccattctctgaagttacaaatcaacgtcaa
gctgtacaagatattttatttagactattaggtggtcgtcctaatttacaactggtggtg
gaagaaattcgtccatgtgctgaagctgaagatagtactgaggtcatattgaaagtcgtg
gaacgattagctactggtacaacatcgactatatctgccagtgaacttgcaaagtattta
tcaagcccatcagttgcgccgcaacttcaatcacaattatgtgtgaaccgtttaattccg
gaaatatctccgtctgcttcacagatagtcgcatataatgagaatccaccagctggtttt
gacagactaatatggcaacaggcctgtctcgacaatccacatcctaatcgtatgattcca
gttccatttattggattttctgacttgaagcgacgtaaatgtgatcaacttgcttacggt
gaacaacagagcagtatgattaagtatatcactgaattggtgtctaagctacgcactggt
caacttggtatgtcacaacgacttattcaattaaaacgcaaacaaattgaattaagtcat
agagtgttgaaagttctcaagaaccaagaagttcatagacgatgtggatttgctataagt
gtagaagaagagggaatgcgttgtgaacttgaaagaatttggtcggaacttgtcgctcca
agaggtttacgtattcgatttcaagaagcattgtctacacttcgtaattcttctgagttt
aacaaaagagataaagaaaatattggatcggtttataaaggtgttcatccattagaatct
ggagatggttatccgtcaacttggagtttagatccagattcgttaaatgaactgaaagag
tatttaactcaacgtcataatggtattcgtgaaatgcaacgacttatcactgaaatgaca
aacaatttgaaagttatggaagataatccgataactaatattaatccatctgtacataaa
tcaccatttgtaaactctcctccgatcggtgggatgcacaaggtgtcgttcgcagttaat
tctcgtattgttcattga
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integrated database retrieval system