Schistosoma mansoni: Smp_169800
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Entry
Smp_169800 CDS
T01095
Name
(RefSeq) putative tgf beta receptor associated protein-1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
smm
Schistosoma mansoni
Pathway
smm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Smp_169800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_169800
Membrane trafficking [BR:
smm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
Smp_169800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_10
CNH
Vps39_1
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
8355405
NCBI-ProteinID:
XP_018651222
LinkDB
All DBs
Position
3:16784734..16812737
Genome browser
AA seq
976 aa
AA seq
DB search
MNDYVNNIEPENTKYSLFQSHSRSCTAMETEVEIINFIPSFKGVSSFQLCSFDDEKEKCI
SPQFLCVASDSSYISINLRTNATTELLRSVKEPVRNYIAYFTQNEFIVSGPGSLGIIVDA
NGVSHRAPLQLSSNIVEVFVWKNYFFTITDEFFTIHNILTQSQIQTINLQKPSVACFSAD
AHLLYFTETSDFNTDTASIRNIQVLGPERWDLIARRFILTGCLKQAFHVQQQERNRLTQV
MQLQVEKFKHEQQLFDRRRQRVLGLLGFYHFEKGELDKAASYFEQSTIDIREILFRYSDL
LPKGCYFMPNWFYKLHQTNPEPSHDNNNGDTQISGINLTSDLCILRAAEDSDNDDHDLTI
SSSWLLRYQEFLFNFLRKHHKSKFVEKHLHFVETALVKLYVRLQQAGIQPYLYELIIDTT
SSSDSRSGESGLTKSTSNSDQSLVDLISSLIHIDVEDLTVYLENNNAYHALALIYRWQGN
LSGALEIWRKLVYNELNDSSFPGVEFYISILLDLSAHDPTDSQKQSPYKGVAIHSSSDVN
YEFSVYAELVWNHFMQALRTNHEIIAEQLMLRFPIPSSYINSSCELSIISDSTTETSLES
SLGPSQILSPNHIIQSLISSYPNMTMTYLKHLCYSLPNCHPENHNLLGKLYLNTLLMKLK
STDNLFDDDMKKRIRELRTEFCQLIRYSLLISHKTLLDRLHNESVAVQKKLAYEIAILEG
KANNHMKALKYLIEDINDYKAALYYCLTFSRQQPIHYSARKNDTNVQCNTIAVNSLDNCH
YWDQFEFMEGDSNNQSIFSLLFTTFVEICLDRLLINEENSNDDIKKMILNLLNNPDLKFN
YSKVGYQSNKVPILILILYTSGFTDPTAVTNSTLLTLLFRLPSTWDILEIKPFLHNALRS
TLHEWSELQLEYGLTKYNAKLSVVDLPKKSNCLLIEDDTLCSICHQSIYVYGPSDSFAWL
IPKNQVVHTHCLSSNQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattatgtcaataatattgaaccagagaacacaaagtattcgttatttcagtca
cattcaagatcatgtactgctatggaaaccgaagtggagatcataaattttattccatct
tttaaaggtgtttcatcattccagttgtgctctttcgatgatgagaaagagaagtgcatc
tcaccacaatttttatgtgtcgcatcggacagtagttacatatcaataaatttacgtaca
aacgctactacagagttattacgctcagtaaaagaaccagtacgaaattacatagcttat
tttactcagaatgaatttattgtttctggtccaggatcattgggtattattgtcgatgct
aatggtgtatctcaccgtgcaccacttcagttatcatcaaatatagtagaagtttttgtg
tggaaaaattatttcttcactattactgacgaattttttaccattcacaacatcttaaca
caatcccagatacaaacaataaatcttcaaaagccatctgtagcttgtttttctgctgat
gctcatttgttatactttactgaaacatctgactttaatactgataccgcatccatcaga
aatattcaagtcttaggaccagaacgttgggatttgattgcacgcaggttcatcttaact
ggttgtcttaaacaagcttttcatgtacaacaacaggaacgaaatcgtcttactcaagtc
atgcagttgcaagttgagaaattcaaacatgaacaacaattattcgataggagacgtcaa
cgagtacttggacttttaggattttatcattttgaaaagggtgaactagataaagcagct
tcctactttgaacaaagcacaatagacatacgtgaaatcctgttccggtattccgatctc
ttgccaaaaggttgttattttatgcctaattggttctacaaactgcatcagaccaatccg
gaacctagtcatgacaataacaacggtgatactcaaatatctggaattaatttgactagt
gatttgtgcattttaagagctgcagaagattcagacaatgatgatcatgatctaacaatt
agttcatcatggttattaagatatcaagaattccttttcaactttttgcgtaaacatcat
aaaagtaaatttgttgagaagcatttacattttgtagaaactgccttagttaaactgtac
gttcgattacaacaggctggtattcaaccatatctctatgaattaatcattgatacaacg
tcttctagtgattctcgatcaggtgaaagtggtctcactaagtcaactagtaatagtgat
caaagtttagttgatctgatttcaagcttgatacacattgacgtggaagatttaactgtc
tacttagaaaataataatgcctaccatgctttggcgcttatttatcgttggcaaggtaac
ctttcaggtgcattggaaatatggcgaaaactagtttacaatgagctaaatgattcaagt
tttccaggagtagaattttatatttctatactattggacctatccgcgcatgatccaact
gactctcagaaacaatcaccttataagggagtggctattcattcatcaagtgatgtaaat
tatgaattttctgtctatgctgaattagtatggaatcattttatgcaagctttaagaact
aatcatgagattatagctgaacagctcatgctgcgctttcctattccctcaagttatatt
aattcatcatgtgaattgtctattattagtgacagtacaaccgagacttctttggaaagt
agccttgggccatcccaaattttatcacctaatcatattattcaaagtcttatttcttca
tatccaaatatgacaatgacttatttgaaacatttatgttattctcttcccaattgtcac
ccagaaaatcataatctgttaggcaaactttatttaaatactctattaatgaagttaaag
agcactgacaatttatttgatgatgacatgaaaaaacgaattcgtgaactgagaactgaa
ttttgccaactaatccgttattcgttattgatatcacataaaacattactggaccgttta
cataatgagagtgttgcagttcaaaagaaattagcttatgaaatagcgattcttgaggga
aaggccaataatcatatgaaagctttaaaatatcttattgaagatataaatgattataaa
gccgcattgtactattgtcttacattcagccgtcaacaacctattcattatagcgcacgt
aaaaatgatactaatgtacaatgtaatacaatagcagtaaattcacttgataattgtcat
tattgggaccagtttgaatttatggaaggtgattctaacaatcaatcaatattctccttg
ttatttacaacatttgttgaaatctgtcttgatagacttcttattaacgaggagaactct
aatgatgatataaagaaaatgattttgaatcttcttaataatcctgacttaaaattcaat
tattcaaaagttggatatcagagtaataaagtcccaattcttattcttatcttgtataca
agtggcttcactgatcctactgcagtcacaaactcaacattactgacgttattatttcgt
ttaccatcaacatgggacattctagaaatcaaaccattcctacataatgcacttagatct
actcttcatgaatggtcagaacttcagttagaatatggtttaactaaatataatgcgaaa
ttatctgttgtcgatctccctaaaaaatcaaattgtttattaattgaagatgatactttg
tgctctatatgccatcaatcaatttatgtatatggtccatccgatagctttgcttggctt
attcctaaaaatcaagttgttcacactcattgtctatcatctaatcagtga
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