KEGG   Schistosoma mansoni: Smp_170060
Entry
Smp_170060        CDS       T01095                                 
Name
(RefSeq) hypothetical protein
  KO
K15181  negative elongation factor C/D
Organism
smm  Schistosoma mansoni
Pathway
smm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Smp_170060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smm03021]
    Smp_170060
Transcription machinery [BR:smm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     Smp_170060
SSDB
Motif
Pfam: TH1 SSV1_D-63
Other DBs
NCBI-GeneID: 8351382
NCBI-ProteinID: XP_018654668
LinkDB
Position
W:complement(27409627..27434571)
AA seq 552 aa
MEEARAVLKKKDAILEHPSMLAEAIDCIRYNNPQTGHNEAEELLVESYQGAIEFLFELGT
WLTYIDEDAQSTRNIIESVVKEAILQNYDRSKAITCLTDEASADTMEWLSQMVESPTWRQ
TIYNLAQHPRNEDCPFLSLSMPCIAVKESLIGELVSVPLAWNTLGIFLKCVIYVLQPLLA
AGDTVKNQTFMYSVAFLQPKRNNASCANYSSVSHSELSLINSESLPPIDDVKGFVSAVDN
ENQPYSSEGESHFSFDTAQDMLTHFLEMGCHSEHGYLLLQSILQCLARKMKSHCAHHLIW
LLEAEASRRGRDVSRYTTYLCGARDYPDSMDAMRIILKEQDLIPDAVLQLEEAYKGDAPP
PVALLRQPIFIAMLQWLLKRLNILLNDVSRVYVLKLMKRNWNNMSGSGISLRAFRDLPSL
LRCLSCRPVSLGVFRFVRVVFHTKRVDFELNMDTMKPYCIVVNELAEVNEYLRPALLAFI
TELLASSVEGMEDLSQVLKVAGQPYSTFFMNALHPLVVHPDISDGLKGGKDTDYVNEFLE
YYEKENSPSPSY
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggaagaggccagagctgtccttaagaaaaaagatgccattcttgaacacccgtctatg
cttgcggaagcaattgattgcatccgatataataatccacaaactggacataacgaggca
gaggaacttttagtggagagctatcagggtgcaatcgagttcctgttcgaactggggact
tggctcacctacattgatgaagatgctcagtctactcgtaacataattgaatcagttgtc
aaggaagctattcttcaaaactatgaccgttccaaagccataacatgtttaacagatgaa
gcttcagccgacaccatggagtggcttagtcaaatggtcgaatctccaacttggcgtcaa
accatttataacctagctcagcatccacggaatgaagattgtccttttttgtcactatct
atgccgtgtatagctgtaaaggaaagtctaattggggaactcgtatctgttcctcttgca
tggaacactttaggtattttcttaaagtgcgttatctatgttttacaaccattgctggct
gccggtgatacagttaaaaatcagacatttatgtactccgttgcatttttacagccgaaa
cggaataatgcttcatgtgccaattattctagtgtttcacattcagaactgagcttgatt
aattccgaatcccttccacctattgatgacgttaagggttttgtttccgctgttgataac
gaaaatcagccatactcatctgaaggagagtctcacttttcttttgatactgcacaagat
atgttaacccactttttggaaatgggttgtcatagtgaacatggatatttactcttgcag
tctatcttgcagtgtttggctcgaaagatgaagagccattgtgctcatcatcttatttgg
cttttagaagctgaagcaagtcgaaggggccgtgacgttagtcggtacacaacgtatctc
tgtggtgcccgggattatcctgatagcatggatgcgatgcgtattatccttaaagaacag
gatttaattccggatgcagttttgcagcttgaggaagcatataaaggagatgccccccca
ccagtagctttgttacgacaacccattttcatcgctatgctgcagtggttgttgaagaga
ttgaacatactactgaacgacgtatctcgtgtatacgtactgaagttgatgaagcgaaac
tggaacaatatgtctggcagtggaattagtttacgtgctttccgagatcttccatcgctt
ttgagatgtttatcatgccgacccgtttcacttggtgtatttcgttttgttcgggtcgtt
tttcatacgaaacgcgttgatttcgagttaaatatggacaccatgaaaccttactgtata
gtagtgaatgaactagctgaggtcaatgaatatttacgtccagctctcttagcatttatc
acagaattactggcttcttcagttgaaggaatggaagacttgagtcaggtactaaaggtg
gcgggacaaccttattcaacgttcttcatgaatgcattacatcctctggttgttcatcca
gatatcagtgatggtttaaaagggggaaaagacacagattacgtgaatgaattcctcgag
tattatgaaaaagaaaactcgccatcgccaagttattaa

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