Schistosoma mansoni: Smp_170750
Help
Entry
Smp_170750 CDS
T01095
Name
(RefSeq) putative paired box protein pax-6
KO
K08031
paired box protein 6
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_170750
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
Smp_170750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
HTH_Tnp_IS1
HTH_SB
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
8352905
NCBI-ProteinID:
XP_018652477
LinkDB
All DBs
Position
4:complement(29774606..29798511)
Genome browser
AA seq
1368 aa
AA seq
DB search
MTVSRNKRHSGVNQLGGMFVNGRPLPDTTRQRIIELAHSGARPCDISRILQVSNGCVSKI
LCRYYETGSIRPKAIGGSKPRVATNLVVLKIAHYKRECPSIFAWEIRDRLLQEGICTTEN
IPSVSSINRVLRNVCNDNQLPLSLGSTISQNEHNSNHTNNANHTLNSLMNIQTMQSHEHL
LHHAHTQNNPFNSPLNRMPMVDFQSTHLNRLMNHSNLNKRNYPLQLTVNQVSCELNISPR
SPQTSPPRFNHPQTAAFAAAAAVAAVQQNYPQTSTIYDSIAYQNRLFDMNGISATTTMTT
TTTTTTTTTTTTTTITASNNSSISDVSSTFQSSTNMYDTFSNFLHHTNWPSWYNTSSAAS
SLSSESTGNHTSSIPVDTNMNIRNYTNNGGNSNCLTEADDVREHLNYCSLPNFHLSNGID
CVQFHQSNTNLNKSNSKDNTTNNSTTTTTNSSSSSSNNEEHISNGSHHSLLLSMNLHNRN
VCELKKPDHLLHQMKQQQQQEEQQRRQQQGQQEQSLIKNNYGNDDDDDKHNEFNLLMRNS
SKLYECLDSEIEFPQENNHNNPLNHIPIELKKKEITRSDPIIHSIMEHQLDQSRLNLESF
TVMNSPNQTFLQQKAQCTKQQLSNSHYNSVGTTMTTTDNINSSSRSSNSSTPITTITTSP
TNDLVKICSTPMEILMKTYGSKDNFSKLSSKQNLLQFTNHSHSQPPPPPQQHQQHTTNNY
SDINHTLLNSLTSTSIMNSMDHYHHNQHKIDGKLNDNKKPGRNRTTFTPEQLEILEEEFE
RTHYPDLIIREQLAESMLIPESRIQVWFSNRRAKWRREGKELHNNKQDQSNSPSLDDNNH
SNDQQYNQYSIINNNNHHLHNEQTNQHSSSTSSSTPSTSASSSSTYYDYHQLIIQQNKQK
QEHINMIRKEYGNMNWTYMSTPIHHELPSPKKLFNYSEPFDTLNDIPRNSNSISNNETGT
YTILNDVTRLNSLTNTHLNKLKHTDSLNENGLTTKMDINNTITLFNHYNDTDHNDDLDQR
HIQNIKHDRISMINSDFTKLNCLSYNNHSLETMNSENTITNNHNSDHNSNNHISSLMSSI
HTLNRNDSFDLTSNQERQIDIELIDKIQSNHLDYQPIWLNSTDQIHNYKTDTMNPTLWYG
MTYPQPSTLSTDSGIGSPPLPPPSSLSSSSSMLSNNGIIGKSPISIGYDNGSTNRLLPQI
LPDTSSQLSSMAVAAAAAVVAWNNNNNNSNFIHNQTATPKSTITSNEYDVILNSHESTPI
NYGYLDRINSEFNTSTSSMCAPPSCCSTSTSSTSISSSSPLASTSSLSLSQSSTSSCSTH
NNNTIINFDLSSIVCQTPNVNINTNADNTDNNISSMNNSYYDFSRYFH
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgacggttagcaggaataaaagacattcaggtgtaaatcaattaggtggaatgtttgtt
aatggtcgaccattaccagatacaacacgtcaacgtattattgaattagcacattccggt
gcacgtccatgtgatatatcacgtatattacaagtatctaatggttgtgtatccaaaata
ttatgtcgttattatgaaactggttcaattcgaccaaaagcaattggtggtagtaaacca
agagtagcaacaaatttagttgtattaaaaatagctcattataaaagagaatgtccatcc
atatttgcatgggaaatacgtgatcgtttattacaagaaggtatatgtacaacagagaat
atacctagtgtatcatccataaaccgtgtattacgaaatgtatgtaatgataatcaacta
cctctttcattaggatcaactatttcacaaaatgaacataacagtaatcatactaataat
gctaatcatacattgaattctctcatgaatatacaaaccatgcagtcccatgaacattta
ctacatcatgctcatacacaaaataatccattcaattcaccgctgaatcgaatgccaatg
gttgattttcaatctactcatcttaatcgtcttatgaatcattctaacttaaataaacga
aattatccactgcaattaactgtaaatcaagtatcctgtgaattaaatatatcacctcga
tcaccacaaacttcaccacctcgatttaatcatccacaaacagcagcatttgctgcagca
gctgctgtggcagctgttcaacaaaattatccacaaacttcaacgatatatgattcaatt
gcatatcaaaatcgtttatttgatatgaatggtattagtgctaccactacgatgactacg
actactactactactactactacgactactactaccaccactattacagctagtaacaat
agtagtattagtgatgtatcttcaacattccaatcatcaactaatatgtatgatacattt
tccaatttcttacatcatactaattggccatcatggtataatacatcatcagcagcatca
tcattatcatcagaatctactggcaatcatacatcatctattcctgtggatacaaacatg
aatataagaaattataccaataatggtggtaatagtaattgtttaacagaagctgatgat
gtcagagaacatttaaattattgtagtttaccgaatttccatttatcgaatggtatagat
tgtgttcaatttcatcaatctaatacaaacttgaataaaagtaatagtaaggataatact
actaataatagtactactactactactaatagtagtagtagtagtagtaataatgaagaa
catatttcgaatggttctcatcactctttattattatcaatgaatttgcataataggaat
gtttgtgaattgaagaaaccagatcatttattacatcaaatgaagcagcagcaacaacaa
gaagaacaacaacgacgacaacagcaaggacaacaggaacaatcccttataaagaataat
tatggtaacgatgacgatgatgataaacataatgaattcaatttacttatgagaaattca
tcaaaattatatgaatgtttagattcagaaattgaattccctcaagagaataatcataat
aatcctttaaaccatattccaatagaattgaaaaagaaggagataacaagatcagatcca
ataatccattcaataatggaacatcaattagatcagtcaagactaaatctagaatcattc
acagtaatgaattcacctaatcaaacttttttacaacaaaaagctcaatgtactaaacaa
caactttcaaactcacactacaattcagttggtaccactatgactactactgataatatt
aatagtagtagtcgtagtagtaatagtagtactcctattactaccattaccactagtcct
actaatgatctagttaaaatatgttcaacccctatggaaatattaatgaaaacttatggt
agtaaagataatttttcaaaattatcatcgaaacagaatttattacaatttactaatcat
tcacattcacaaccaccaccaccaccacagcaacaccagcaacatactactaataactac
tcggatatcaatcatacactacttaattccttaacatcaacatcaatcatgaattcaatg
gatcattatcatcataatcaacataaaatagatggaaaattaaatgataataaaaaacca
ggaagaaatagaacaacttttacaccggaacaattagagatacttgaagaagaatttgaa
cgtacacattatcctgatttaataattcgtgaacaattagctgaatcaatgttaatacca
gaatcccgaatacaagtatggttttcaaatcgtcgtgcaaaatggcgacgtgaaggtaaa
gaattacataataataaacaagatcaatctaattcaccaagtttagatgataataatcat
agtaatgatcaacaatataatcaatattcaataatcaataataataatcatcatcttcat
aatgaacaaaccaatcaacattcttcttctacttcttcgtctactccttctacttctgct
tcttcttcttctacctattatgattatcaccagttgattattcaacaaaataaacaaaaa
caagaacatataaatatgattagaaaagaatatggtaatatgaattggacttatatgtct
acaccaatacatcatgaacttccatcacctaagaaactattcaattattctgaaccattt
gatacattgaatgatataccgcgcaattcaaattcaatttctaataatgaaacaggaact
tatactattttaaatgatgtaacacgtttaaattcattgaccaatactcatttaaataaa
ttaaaacatacagatagtttaaatgaaaatggcttgacaacaaaaatggatattaacaat
accattacattatttaatcattataatgatacagatcataatgatgatctagatcaaaga
catatacaaaacattaaacatgatcgtatatcaatgataaattcagattttactaaacta
aactgtttatcctataataatcattcattagagacaatgaattctgagaataccattaca
aataatcataatagtgatcataatagtaataatcatataagtagtttaatgagtagtata
catacattaaatagaaatgattcatttgatctaacttcaaatcaagaaagacaaattgat
atagaattaattgataaaatacaatcaaatcatttagattatcaaccaatatggttgaat
tcgacagatcaaatacataattataaaacagatacaatgaatcctacattatggtatgga
atgacatatcctcaaccaagtacattatctactgattctggtattggttcaccaccactc
ccaccaccatcatcattatcatcgtcatcgtctatgctgtctaataatggtatcattggt
aaatcacctatatctattggatatgataatggatcaactaatcgtctgctaccacaaata
cttcctgatacatcgtctcaattatcttctatggctgtagcagctgcagcggctgttgta
gcttggaataataacaataataattcaaattttattcacaatcaaaccgcaacacctaaa
tcaacaataacatctaatgaatatgatgtcatattgaattctcatgaatctacaccgatt
aattatggatatttagatagaattaattcagaatttaatacttctacatcttcaatgtgt
gcaccaccttcatgttgttctacttccacttcttctacttccatttcttcgtcttctccg
ttagcctctacatcttcattatcattatcacaatcatcaacttcttcatgttctacacat
aataacaatactataattaattttgatttaagtagtatagtttgtcaaacccctaatgta
aacatcaatactaatgctgataatactgataataatataagtagtatgaataacagttat
tatgatttttcacgttattttcattaa
DBGET
integrated database retrieval system
