KEGG   Schistosoma mansoni: Smp_171230
Entry
Smp_171230        CDS       T01095                                 
Name
(RefSeq) putative dna repair/transcription protein met18/mms19
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
smm  Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:smm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smm03036]
    Smp_171230
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_171230
Chromosome and associated proteins [BR:smm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Smp_171230
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Smp_171230
SSDB
Motif
Pfam: MMS19_N DUF2096_N
Other DBs
NCBI-GeneID: 8355819
NCBI-ProteinID: XP_018650366
LinkDB
Position
2:complement(22969632..23006677)
AA seq 1092 aa
MESNFIQNYLVAIDEEKDPQILHLIFRMNVIVLKEFPSVVEFKDELFETISVYFPIDFSP
PPGGGISGVTRDLLASSLHQCLFAMRNITGHNLMPLICEKIESQWPNGQLDALCLFNDCL
HGQLQRSDGDDNISHVLSLDKNPIDIRHISPYLGVIIPTLIKIADKYGKRSDNSDLYALA
LSCISGLVHAHSQQTNDKSQLEDFTVILLRSFGFSPNQRQVPLIIPPGVIVDYITESFKS
AQTNALLLSILFNYTIPYLCVPLLSNSYINSNDHLGIAEETKLNIDELINWQSCISLLDK
IFQNITEENLMNALHYDEKTLGTLNNLKMNIYSIINKLQECSVNSVNLLKHSPASMLSDE
KIIYFSVCLCRLFYSLVKITSKKDLSSSVNESSTILFDNTSSSYSSYVDSIFNTIRSAFR
WLDKISSTNNSNQLVDSEVLKSIRDELLSFIPIIYKSCDLSTRKLDQFLFDYLKDCQREQ
ITLNNSNNFTMDILKYCSCKNLSLLQKTIEFILEKCNNNDMLPDSDNVNLVSLRYWAKSF
ISLLYFVCEYLVENSINDNTETVNPLSIHSYLFELCQNVKYFVNIIQHYCSDPITNDHSQ
SILDEINKLNFIFRTITSLCNLSEQTKLFQIYKHYFDQMDRNHLKIHPVTLGLFTTLCGI
IGGLRPEFVNSESPVQLLTFIMDNITKTLCTSAAPTLNSTTNNSSMPSSVLSCYSKTMLS
SIAQTYASVLNKSNDAFALDITNHLSATLNYFWSITEQNNSVDFHTFICFWLLWSIRGLL
ATFNVSIHGAANVENNNNDYSHHKKWCHSLIQSVFLDFNTIYHNDGNDNWICTFAKSLSS
SHGRILYSIDCFKQADQILLNLGMKSTDCCLNSFNNCRITNSYIQNVLECIHEPIYNLIN
LLINVTRSQSVDFEKSNLFKSFRNSIVRFYLNMTVRLPNEYLTEQLVNKTIPSALFATTS
SNVHCQLAGLKFISIILSDNLTKNFELCNIISENQADDLLEKLPKLIHFSNSDQENNDTV
MFDQGNEQNINISTCLRLIIARSLCNIIKLFPEQLINRHRDVNILPLLDQLVDDPNRYVR
IEAVQARNLWLI
NT seq 3281 nt   +upstreamnt  +downstreamnt
caatggaatctaattttatccagaattatttagtagctattgatgaagagaaagatccac
aaattttacatctgatttttcgtatgaatgtaatcgttcttaaagagtttccttcagtag
tcgagtttaaggatgaactatttgaaacaatatcagtttattttcctatcgacttttcac
cgcctccaggtggtggtatctctggagttacgcgtgatttactagcgtctagcttgcacc
aatgtttatttgctatgcgaaatataactggtcataatcttatgccacttatttgcgaga
aaattgaatcacaatggcctaatggtcagttggatgctttatgcttattcaatgattgtt
tacatggacaacttcaacgttcagatggtgatgataatatcagtcatgtcttgtccttag
ataagaatccaatcgatatacgtcatatttctccttatcttggtgtaattattcctacat
taattaaaattgctgacaaatacggaaaacgaagcgataacagtgatttgtacgctcttg
ctttatcttgcatctctggtcttgtccatgctcattctcaacagaccaatgataagtctc
aattggaagattttacagtaatcttgttgagaagtttcggattttcacctaaccaacgtc
aagtaccattaataattcctcctggtgttattgtcgattatattactgaaagttttaaat
cagctcagactaatgctttattattatctattttgttcaactacacgattccatatttgt
gtgttccacttttgtcaaattcttacataaattccaatgatcatctagggattgccgagg
aaactaaacttaatattgatgaattaataaattggcaatcgtgtatttctttattggata
aaattttccagaatattactgaagaaaatttaatgaatgctctgcattatgatgaaaaaa
cacttgggacactaaacaatttaaaaatgaatatatattcaatcataaacaagttacaag
aatgttcagtgaattcagttaatctgttgaaacattctcctgcttcaatgttgtccgatg
aaaaaatcatatatttttcagtatgcctctgtcgtttattttactcattagtaaaaatta
cgagtaaaaaagatttatcttcatctgttaacgagagctcaaccattttatttgataaca
catcatcatcgtactccagttatgtcgactcaattttcaatacaatccgctcagcttttc
gatggttggataaaatttcttcaacaaataatagtaatcagctagtagattctgaagttt
taaaatctataagagatgagttactttcattcattccgattatttataaatcgtgcgatc
tatctactcgcaaactagaccaatttcttttcgactatctcaaagattgtcaacgggaac
agattacattgaataattcaaataactttacaatggacattctcaaatattgttcatgta
aaaatttaagtttactgcagaaaacaattgaatttattcttgaaaagtgtaataataatg
atatgttaccggactctgataacgttaaccttgtcagtcttcgatattgggccaaaagct
tcatttcattattgtattttgtatgtgaatatttggttgaaaattctattaatgataata
ctgaaacagtaaacccactttcaatccattcgtatttatttgagttatgtcaaaatgtaa
aatatttcgtaaatattatccaacactactgtagcgatccaatcacaaatgatcattctc
aatctatactggatgaaatcaataaattgaatttcatctttcgaactatcacaagtctat
gcaatttatctgagcaaactaaactttttcaaatttataaacattattttgatcaaatgg
atcgtaatcacctcaagatacatcctgtaactcttggattgtttacaactctatgcggaa
ttattggtggattaagaccggagtttgtaaattctgaaagtccagttcaactgttgactt
tcatcatggataatattacaaagactctatgtacatctgctgcccccaccctcaactcca
caaccaataattcctcaatgccatcgtctgttttatcctgttattcaaaaactatgttgt
catctatcgctcaaacatatgcttctgtattgaataaatcaaatgatgcttttgcattag
atattactaatcatttgtccgctactttaaactatttttggtcgataacagaacagaata
attctgttgatttccatacattcatttgtttttggcttttatggtcaattcgtggtctat
tggctacattcaatgttagtattcatggtgctgctaatgtcgaaaataataacaatgatt
attctcatcataagaagtggtgtcattctcttatacaatcagtttttcttgatttcaaca
caatttatcacaatgatggtaatgataattggatttgtacttttgcgaaaagtttatcat
catcacatggtcgtattctctattcaatcgattgttttaaacaagctgatcaaatacttt
taaacttagggatgaaatcaactgattgctgtctaaatagtttcaataattgtcgtatta
caaattcgtatattcaaaatgttttggaatgtattcatgaacctatttataatttaatta
atttattgatcaatgtaactagatctcaatcagtagattttgaaaaaagtaacttgttca
aatcgtttcgaaactcaatagtaaggttttatttgaacatgactgttcgattgcctaatg
aatatctcactgaacagttagtaaataaaacaataccatctgctttgttcgctactacat
catctaatgtccactgtcaattagctggtttgaagttcatatcaataatcttaagtgata
atttgacaaaaaactttgaattatgcaacattatctcagaaaaccaagctgatgatctat
tggagaaattgccaaaattaatccatttctccaatagtgatcaggagaataacgatactg
taatgtttgatcaaggaaatgaacaaaatatcaatatttcaacttgtttacgtttgatta
tcgcacgtagtttgtgcaacattataaaattattcccagaacaattgattaatcgtcatc
gtgatgtaaatattctaccattgttagatcaattagttgatgatcccaatcgatatgtac
gtattgaagcagttcaagcaagaaatttatggttgatctga

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