Schistosoma mansoni: Smp_173330
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Entry
Smp_173330 CDS
T01095
Name
(RefSeq) putative vacuolar sorting protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
smm
Schistosoma mansoni
Pathway
smm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Smp_173330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_173330
Membrane trafficking [BR:
smm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
Smp_173330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
ARM_TANGO6
Motif
Other DBs
NCBI-GeneID:
8349170
NCBI-ProteinID:
XP_018653136
LinkDB
All DBs
Position
6:complement(8445635..>8468237)
Genome browser
AA seq
1052 aa
AA seq
DB search
MIEGIIWRLNIKCMCIKIRAAGFKTLRYVSMISKEDQEGLLEECLCTVRQYACQMECCLE
KRYLVDAIQHAANMLMEMRNYSLSPKAYYELYIVVTDKLRTLESYLIEEHKSGRKVSYLY
ETVQYISNILPRLYLLITVGVYHIKCSDLSRREILRDLVEMCSGVQHPTRGLFLRSYLLQ
SLRSDLLPDIESTPVYSQGTIADSINFLLFNFSEMNKLWVRMQHQGHTRDREKREQERRE
LRILVGANLNRLSQLESIDVERYKTQVLPPILEQIIECRDVIAQEYLMDVVIQVFPDEFH
LATLPLLLRTCNHLQVGVKLKPIVCSLIDRLSKHVANELEAGRELKIEVSCNNYSPIKAK
TSCNNINGNDDNNNNGNHSSLHNEEDISSSTVSDVQLKNSDQNQEKIIKNEMNVTIPSSY
TTSTNIDQTSMSAALSTKTTTTTTDLFSLFFYEVNQIIHARLTLCELTLNNLQLSSSNNN
MKTRPTIQTVALMNGLPLEDIPAFYSVLVYLAMIIHPNNCSSLIDICLNATADALNHVGL
VLIPPGSSLSRDLLRLLYLPLDGSFPQSMSGVHRISAPVTSLSDLRTVLGMSGFRRLVSL
LDPKTTKCRLAYDLLNAALERDQRQRQMLQFTQSISKYDANKGSSSCAHFSSRLTTEADL
DNLFELIDGLLTTDPNSCEDPNEFIDAQSLIAGMLHILGPSPKSLDPDICFKLFTKAQLR
LEQAGHAIVRFNFPALVFQSLQLIQTYYELRNQNSNWEESVTNVVRFCHRCCTCLVAADA
SESALRLFLYSALVIDKIQFTNQESMIYEFISQALTLYEEAVSDSHAQVEAIALITSTLY
QINCLTGDNQSTLRTQCTRAAARLLRKHDQCRAVCASTHLYWPTKPLIRKGIKPSLLIPV
TDNNPEISTYAKLSETEELSDEYYNKLRDPKGVISCLDRAARFAKECMDTAVRAQLFIDI
LNLSVNLRLSGCEQITDDRINDTISDIRNLLNSLEPSPVTDHITVHFKNTLNYIRYEQQT
TSAKSDPVNVNVDTNPDVQSLSSKLFASVQLY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggtatcatttggcggttgaatataaaatgcatgtgcataaaaatacgtgcc
gccggtttcaagacattgcgttatgtttcaatgatctctaaagaggatcaagaaggtctt
ttggaggaatgtttatgcacagtcagacagtacgcttgtcaaatggaatgctgtctggaa
aaaagatatttggttgacgctatacaacatgctgctaatatgctaatggagatgagaaat
tattctttgtcaccaaaagcatactatgaattatatattgttgttacagacaaactacgt
actttggaatcttaccttatcgaagaacataagagtggacgcaaggtttcatatttatat
gaaacggttcaatatatttcaaatattcttcccagattgtacttacttattactgttgga
gtttatcatattaaatgttccgacctgtcacgacgtgaaattcttcgtgatctggtagaa
atgtgttctggtgtacaacatcctacaagaggcctctttttgagaagctatctattgcaa
tcactgcgaagtgatcttcttccagatattgagtcaactcctgtttactcacaagggaca
attgctgatagtataaacttcctactattcaatttttcggaaatgaataaactttgggtg
cgaatgcaacatcaaggacatactagagaccgtgaaaagcgagagcaagaacgtcgagaa
ttacgtatacttgttggtgcaaatctgaatcgattatctcaactagaatcaattgatgtt
gagcgatataaaacgcaagttctaccaccgattttggaacagattattgaatgccgtgat
gttatcgcacaagaatatctcatggatgtggtcatacaggtttttcctgatgagtttcat
ttggctaccttacctctgttgttgcgtacttgtaatcatttacaagttggtgtcaaactg
aagccgattgtttgcagtcttatcgatcgtttgtccaaacatgtagctaatgaattagaa
gctggacgtgaattaaaaattgaagtatcatgcaataactactcaccaattaaagcaaaa
acttcttgtaataatatcaacggtaatgatgataataataataacggcaatcattcttct
ctacataatgaagaagacatatcttcatcaacagtttctgatgttcaattaaaaaattct
gatcaaaatcaagagaaaataataaagaatgaaatgaatgtaacaataccatcgagttat
actacttctactaatattgaccaaacttctatgtctgctgcattgtcaacaaaaacaacc
accacaacaactgatcttttctcattattcttctatgaagtgaatcaaattattcatgca
cgtttaacattatgtgaattaacattaaataatttacaattatcatcatctaataataat
atgaaaactcgtcctacaatacaaactgtagcattaatgaatggtttaccattagaagat
attccagcattctattcagttttagtttatttagctatgataattcatccaaataattgt
tcttccttaattgatatttgtttaaacgctacagcagatgcattgaatcatgttggtcta
gttctaatacctccaggatcttcattatcacgtgatttacttcgcctcctgtatctacca
ttagatggttcatttccccaatcaatgagtggtgttcatcgtataagtgctcctgtaaca
tcacttagtgatttacgcacagtgctaggaatgtccggatttcgacgtttagtttcatta
ttagatccaaaaactaccaaatgtcgattagcttatgatctattaaatgctgctttagaa
cgtgatcaacgtcagcgtcaaatgttacaatttactcaaagtattagcaaatatgatgca
aataaaggttcatcatcatgtgctcatttttcatcacgtttaactactgaagcagatcta
gataatttatttgaattaattgatggattgttaacaacggatcctaattcatgtgaagat
ccaaatgaattcattgatgcacaaagtttaatagctggtatgctgcatattctaggacca
agtcctaaaagtctagatccagatatatgtttcaaattgtttacaaaagctcaattacgt
ttagaacaagctggacatgcaattgttcgtttcaattttcctgcacttgtatttcagagt
cttcaattaatacaaacatattatgaattacgtaatcaaaattccaattgggaagagagt
gttacaaatgtagtgagattttgtcaccgttgttgtacatgtttagtagcagcggatgca
tctgaatcagccttacgattgtttttgtactcagcactggtgattgataaaatacaattt
accaatcaagaatccatgatatatgagtttatttcacaagcgcttacactttacgaagaa
gctgtttcagattctcatgcacaagttgaagcaattgcattaattactagtaccttatat
caaattaattgtctcactggtgataatcaatctacattacgtactcaatgtacacgagct
gcagcacgtctactacgtaaacatgatcaatgtcgagcagtttgtgcaagtacacattta
tattggccaactaaaccattaattaggaaaggaattaaaccaagtctacttatccctgtg
acagataataatccagaaatttcaacttatgcaaaattatctgaaacggaagaattatca
gatgaatattacaataaattacgtgatccaaaaggtgtgatttcatgcctagatcgagcg
gctcgatttgccaaagaatgtatggatactgctgttcgtgcacaattatttattgatatt
cttaatctatccgtcaatcttcgtttatctggttgtgaacaaataactgatgaccgaata
aatgataccattagtgacattaggaatttactgaacagtttagaaccatctcctgtcact
gatcacataacagtacattttaagaatactttaaattatatacgatatgaacaacagact
acttctgctaaaagtgatcctgtcaacgttaatgttgatactaatcccgatgttcagtca
ttaagtagcaaactatttgcatctgttcaattatactga
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