Schistosoma mansoni: Smp_174700
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Entry
Smp_174700 CDS
T01095
Name
(RefSeq) putative hepatocyte nuclear factor 4-alpha (hnf-4-alpha)
KO
K08704
hepatocyte nuclear factor 4
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_174700
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smm03310
]
Smp_174700
Transcription factors [BR:
smm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
Smp_174700
Nuclear receptors [BR:
smm03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
Smp_174700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
8341675
NCBI-ProteinID:
XP_018652848
LinkDB
All DBs
Position
6:98549..121940
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AA seq
1061 aa
AA seq
DB search
MDHNEKPINDTESIHYVTNYVTNPTYPMMKDSNYHINQQDNYDHNNQYYRNHHHQHPYQH
QHHLDHLQQRHHQSSNNPLQQSSYIHHTMNIEEPMIQINDPSSIISTNTTHNETSFIEEM
NVTNAATTAVAMATAAGIVVTIPNTEYSLNSNSQPILSHSFPCSSNYNYYQYYLNNNHSN
QESFDLLTWQHNRINHDLNSCLTLQQQQRQDIEDVGNTNETTSTTPISSSNVNLLEETRK
YNSRRLNDNGMKSQTKLSSSDDDEDIKRQNQNILKSGMLCLICEDKATGKHYGAYSCDGC
KGFFRRSVRRKHSYTCRHKKNCIVTKDKRNQCRFCRFRKCFRVGMKESAVQKERDKISNR
HINYDPNSSIHSTIDLQKLLQAEAIANCAIHQNYMNITKKSTDLFDEQSIYKELNENNLA
SINDICESIRTQLIFLIEWAKNLTVFTSLTINDQIALLQAHAGEMLILGAIWRSITLGPT
INKSNEYHIDKLKYIEQKMNQNGNNNNNNIPTTIINDMTTTTTTAHTSNVVAMVTTIALS
HSWNSTVTTTTTLSNNKNNGGGSGGGEQSTQKNSNIDDPLDTTYIQSINYEPQFILLGNN
RIISRQNPLPEIADLANMIINEIYQPIQNLCLDEIEIVCFRAIMFFDPSCESLSENGRLL
IRSCQYLIQMELMNIMNNKLYLPQGRFGALLLLIPEFHSITLHMINKLQIIHQMGFTKLD
GLLLEILLNNAINESNDTTESTYLKSSIKHYHSLNKHVFHEENKLPTVYSMPKLYPIQND
YTYTTHITESTTSLSSSTSSTLSTTSTTYFNSIPIVREVDYTTSESDHISCEELSSMNHY
LPLSSSTVTQLNVLDKMYMTTADTTSTTQPTNTEVNSPKYTGQLEPGSISSIQSSNLLND
YDNIENCNSDKQPSNDMLAQYYHAVQPIMSTVKKFSTNLDFSSHNNNRNVINNDNVNQSL
YAMHLGEETVENISNTNYSIHSNIINCLPTLEPGIYYTDNQFYTTYSNHLNINKTKYNQN
TTNTTISSSNNDNTLPIYTSYDAKHLTPIDNPNQSYPTMNF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggatcataatgagaaaccgatcaatgatactgaatcaattcattatgtaacaaattat
gtaactaatccaacctatccaatgatgaaagattctaattatcatataaatcaacaagac
aactatgatcataataatcaatattatcgtaatcatcatcatcaacatccttatcagcat
cagcatcatctggatcatcttcaacaaagacatcatcaatcttctaataatccattacaa
caatcatcatatatacatcatacaatgaatatagaagagccaatgattcaaataaatgat
ccatcttcaattatatcaactaatactactcacaatgaaacatcatttattgaagaaatg
aatgtaactaatgctgctacaactgcagtagctatggcaacagctgctggaattgttgtg
actatacctaatacagaatattcattgaactctaatagtcaacctatattatctcattcg
tttccatgttcatcaaattacaattactatcaatattatttaaataataatcattctaat
caagaatcatttgatttgttaacatggcaacataatcgtatcaatcatgatttgaatagt
tgtcttacattacaacaacaacaacgacaagatattgaagatgtcggtaatactaatgag
actactagtacaacccctatttctagtagtaatgtcaatctcttggaagaaacaaggaag
tataacagtcgacgtctaaatgataatggtatgaaatctcaaacaaaattatctagttct
gatgatgatgaagatataaaacgtcaaaatcaaaatatacttaaatctggtatgttatgt
cttatatgtgaagataaagcaacaggtaaacattatggtgcatattcatgtgatggatgt
aaaggattttttcgacgttctgttcgtcgtaaacattcatatacatgtagacataaaaaa
aattgtatagttacaaaagataaacgtaatcaatgtcgattttgtcggtttcgtaaatgt
tttcgtgttggtatgaaagaatctgctgtacaaaaagaacgtgataaaataagtaatcgt
catataaattatgatcctaattcatcgattcattcaacgatagatttacaaaaattatta
caagctgaagcaatagctaattgtgcaatacatcaaaattatatgaatataacaaaaaaa
tctactgatttatttgatgaacaatccatctataaagaattaaatgaaaataatttagcc
agtattaatgatatttgtgaatcaatacgtactcaattaatatttttaattgaatgggct
aaaaatctcactgtattcacatcattaacaattaatgatcagattgcattattacaagca
cacgctggtgaaatgcttatactaggtgctatatggagatcaattacattaggaccaaca
ataaataaatcaaatgaatatcatatagataaattaaaatatattgaacaaaaaatgaat
caaaatggtaataataataataataatatacctactactatcatcaatgatatgactact
actactactactgctcatacctcaaatgttgttgctatggttactacaatagcattatct
cattcatggaattctactgttaccactactactactctgtccaataataaaaataatggt
ggtggtagtggtggtggagaacaatcaacccaaaagaattcaaacattgatgatccatta
gatactacttatatacaatcaattaattatgaaccacaatttatattattaggtaataat
cgtattatatcaagacaaaatccattaccagaaatagctgatttagctaatatgattata
aatgaaatatatcaaccaatacaaaatttatgtttagatgaaattgaaattgtatgcttt
cgtgcaattatgttctttgatccaagttgtgaatccttatcagagaatggacgtttatta
atacgtagttgtcaatatttaatacaaatggaattaatgaatataatgaataataaatta
tatttaccacaaggacgttttggtgcattattattattaataccagaatttcattcaatt
acattacatatgattaataaattacaaattatacatcaaatgggttttactaaattagat
ggtttattattagaaatattattaaataatgcaataaatgaatcaaatgatactactgaa
tctacttatttaaaatcatccattaaacattatcattcattaaataaacatgtatttcat
gaagagaataaattaccaacagtctattcaatgcctaaattatatccaatacaaaatgat
tatacttatactacacatattacagaatccactacatctttatcctcttctacatcatcg
acattatcaactacatcaactacatattttaatagtataccgattgtacgcgaagttgac
tatacaacaagtgaatctgatcatatcagctgtgaagaattatctagtatgaaccattat
ttacccctaagttcttccacagtaacacaattaaatgtattagataaaatgtatatgaca
acagcagacacaacgtctaccacacagccaacgaataccgaagtgaattcaccaaagtat
acaggacaacttgaaccaggatcaatctcatcaatacaatcatctaatttattgaatgat
tatgacaatattgaaaactgtaattcagacaaacaacccagtaatgatatgttagctcaa
tattatcatgctgttcaaccaattatgagtacagtaaaaaaatttagtacgaatttggat
ttcagtagtcataataataatcgtaatgttattaataatgataatgtcaatcaatcactt
tatgctatgcatttaggtgaagaaactgttgaaaatatttcaaatacaaattattcaatc
cactcaaatattattaattgtctaccaactttagaacctggtatatattatacagataat
caattctatactacttattcaaatcatttaaatattaataaaacaaaatacaatcagaat
actactaatactactatcagtagtagtaataatgataatactttaccaatttatactagt
tacgatgccaaacatttgacaccaattgataatcctaatcaatcatatcctacaatgaat
ttctaa
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