Schistosoma mansoni: Smp_174890
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Entry
Smp_174890 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_174890
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
Smp_174890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
8352772
NCBI-ProteinID:
XP_018654193
UniProt:
G4VR59
LinkDB
All DBs
Position
W:14619599..14633418
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AA seq
521 aa
AA seq
DB search
MLDLRHYYGRNKLYFLRLRRFCQFILNLDKDGFYDNWLGKESYSTLNTAEDFRLLHSEKA
RVICAMWYFLSRHKFKEAARLLAHSIHAYPMSSTWVWRVAFHIFQCLKDDVGLRTFNRVL
DGFLLSDENNRILEFILYEISKGNLNAVQFCRTNKQPIQRNKYASLHTVLTREPEFAHVQ
RLQRLYEGYSFYGMWLKQINSLASPSDPEDIHVTADNLAEKAYHRLQEVEALVSEGHLCD
TFVRAFIEILQYFNECTRAHALLLSYAQKVPENPNTLRYLCEWYKRQHVPVTHPSAVLSP
SHPITKNCHDSSACSLDLSDGNTTVDETTQSHTAHQKKSPKSSKNSKICLEYRISFSRRT
LPEPAPNLPDNYESMSKKEVKSLLRRNHGHLPTIISCLKRRRFSDALDLSFLLLDHPSWA
VYCEPWRLLRKSILCIGKTNSQVLRAWTMRKRYWNKLHFSLPNLPVIAKSMKLLLNKLDL
TESNQYSDEESKLNDRLNVQLTIVTNMRPVIFHEFSNTDLS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcttcgccactattatggtagaaataaactttacttcttaagacttcgtcga
ttctgccagtttattttaaatctcgacaaggatggattttatgacaattggctgggaaaa
gaatcttattccactttgaacacagctgaggattttagactgctacattccgagaaagct
cgcgttatttgtgctatgtggtacttcttgtcgaggcacaagtttaaagaggctgctaga
ttactagctcactcgatccatgcatatccaatgtcatcgacctgggtttggcgggttgca
ttccatatattccagtgtttgaaggatgatgttggcttgagaacatttaatagggtttta
gatgggtttcttttgagtgatgaaaataaccgtatattagaatttatattgtatgagatc
agcaaaggaaacttgaatgctgtacagttttgtcgcacaaataaacagcctattcaacga
aataaatatgcaagtcttcatacagtcttgactagagagccagaatttgcacatgttcag
cgattacaacgactctatgaaggttacagcttttatggaatgtggcttaaacaaattaat
tcattagcatcacctagtgatcctgaagacattcatgtgacagccgataatttagctgag
aaagcttaccatcgattacaagaagttgaagctctcgtttctgagggtcatttgtgcgac
acctttgttagagcatttattgaaatactgcaatattttaatgaatgtacacgtgcacat
gccttactacttagttacgctcaaaaagtacctgaaaacccaaacacattaagatattta
tgcgaatggtataaacgtcaacatgtaccagttactcatccatcggcagttttgtctcca
tctcatccaataaccaaaaactgtcatgattcctcagcatgtagtttagatctaagtgat
ggtaacacaactgttgatgaaactacgcaatcacataccgcccatcaaaagaaatcgccc
aaaagttcgaaaaattcaaaaatctgtttagaatatcgtatatcatttagcaggcgtaca
ttacctgaaccagctcctaacctgcctgataattatgaatctatgtcgaagaaagaagtg
aaaagtctattaagaagaaatcatggccatttaccaactataatttcttgtttaaaacgt
agaagattttctgatgcattggatctatcatttttattgcttgatcatccatcgtgggct
gtatactgcgaaccttggcgcctcttacggaaaagtatattatgcatcggcaaaacaaat
tcccaggttttacgtgcatggactatgcgaaagaggtattggaataaattgcacttttct
ttacctaatttacctgttattgccaagtctatgaagttattgttgaataaactcgatttg
accgaatccaatcaatacagtgatgaggaatcgaaattgaatgatcgtttaaatgtccaa
ttaacaattgttactaatatgagaccagttatttttcatgagttttccaatacagactta
tcttga
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