Schistosoma mansoni: Smp_178260
Help
Entry
Smp_178260 CDS
T01095
Name
(RefSeq) DNA polymerase alpha catalytic subunit,putative
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smp_178260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smm03032
]
Smp_178260
Enzymes [BR:
smm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smp_178260
DNA replication proteins [BR:
smm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
Smp_178260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
8345512
NCBI-ProteinID:
XP_018645831
LinkDB
All DBs
Position
W
Genome browser
AA seq
1644 aa
AA seq
DB search
MQLISFQEKDEQPVYETVDEAEYAELVRKRLEDDWIVDDEGGDYAEDGREIFDDNDEDEE
SYDSKPKAKSKMSSTSIPKKKRLNPDIRASDSAPLRPPVGRGIRSLFAASSGSNSSKKRK
EMKDLSVDPNLDDLLAELESSVTEPKPHHHNPDNLSRKSFVASKRNSGVHGNVVNTPTPL
KRRSPERPEQPIHTPSGSRLRLPLVSEKKHSSQTPLDQRSRNPFSCRELTGTEPKMKHSK
PQVTGAISLPTEEATSMVSEVDETNFSEDFEMEMIPKNIQPAVQPPKSTSGSNMQSTTSV
TANWLTEENLAKADETTWIDETSPVSFPPSSNKGNILYFYWFDAHEDFKQLPGIVYLFGK
LYDHSKSGTYASCCLRIKDLERRIFLLPRTSSPENGDIPTVKDVYMEFRDLTSQYKIGKF
RCKTTEKRYAFEYADVPETSDYLEVRYAASYSALPADLQGKTFSHIFGTNTSFLENLLLD
LQLRGPCWLEIKDASQVQPQISWCQIDYEVIWRSGTGCPITKLSTVIESQKSSDNTSDLM
KVPPAPPLCLAAINIKSVTQKHSSHSEIISIGLLIDNAYLLDRPIEKSLFQTHYLVLAPP
KDAALPYDLRTKLPSYGAQYSPPSSTWLSLNPGVSSTPSTVEKYKNHSNGDSSGAGGVDV
EPNERALLGRFLTRLHKLDPDIIIGHDLWGHQIELLIQRLNANKVPHWHRVGRLRRSVNF
PMNLNSRSWIIRHSMPGRLVCDTKVSARELVRSRTYNLSDLASQVLGEVTSKKDDKSSQI
GVLPKRQIPPILISRLNGNTKFVCDNDLSIMGVGAELADIEIDSADLRCLFSNSDLVRQL
IDFCLSDAHLVLRLCHQLQVLPLAMQITSICGNVLSRTLSGGRAERNEALLLHAFTQHGY
IVPDPPVSHRGPHSNRHDEWDGIQEQAVEDAGTGRRKPAYTGGLVLEPKKGFYDKYILLL
DFNSLYPSIIQEFNICFTTVDRDLVATTSSDKEPLDLDTIVTTLIATVHGDSNSISVSKS
DNDKKIRLPVDQEPGLLPAEIRRLVESRKEVKKLLANTSSGDAAQRAQWNTRQAALKLTA
NSVYGCLGFAASRFCARGLAALVTGLGRAVLMNTRDLVENMNMEVIYGDTDSIMVNTNTT
DLLAALAIGEKIRQEVNKHYRLLELDTDGVYAAMLLLAKKKYAALSVINPVQWATAAKIS
INQGLTPQVVCTKQEMKGLDIVRRDWSALAISVGRRCVAALLSGEPKDIILDRIHADLTE
TAEKVRQGKLPISEFIITKMLTKNPEDYSDAKSQPHVQVALRLNGSAADDKKTGTRRLRA
GDTVEYVICEDGSGQLATHRGYSPTELTSCLYKVSDDSEPSTKGNLSIDVNYYLAHQIHP
VVSRLVAPIEGTSPARIADCLGLDPSGYRRSNVTTVVDEDDENNPDIGFSSGFSSFTNCG
DVESLYINCPRNCGGPPIAIKTSAFSVVGKTWFCPTCSHNLLLSQDSARLVTNRLVFEAR
RLIVHYQLGWMTCEDPACAVVTRSLHCPPSSGHHTIGESDGLWARGGRPLCGVCGGQAAL
KSNYSEAKLYRQLCFFRYLVTPPNNKNAGSNADMEITLPPVVSSILSQCRNHFDRLLSHS
AFAMVDLGKLFSGLRTTCTGPGFR
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttatttcctttcaggaaaaagatgagcaaccagtgtacgaaactgttgacgaa
gcagaatatgctgagttggttagaaaacgtctggaagatgactggattgttgatgacgaa
ggtggcgattacgcagaagatggcagggaaatatttgacgataacgatgaagatgaagaa
tcatatgattcaaaaccgaaagcgaagagcaaaatgtcatctacgtcaataccgaagaag
aaacggttaaatcctgatatccgagctagtgattcagcaccactgcgtcctcctgtcggg
cgtggtattcggagtctatttgctgcttcctcaggttcaaattctagtaagaaaagaaaa
gaaatgaaagatctctctgtggaccctaacctagatgatttgttagcagaattagaatca
tctgtaacagaacctaaacctcatcaccataaccctgataatttatcgcgaaaaagtttc
gtagcttcaaaacgaaactctggagtacatggcaatgtggtaaatacacctacccctttg
aaacgtcgttcacccgaacggccagaacagcctattcacacacctagcgggtctcgtcta
agacttcccttagtatctgaaaagaagcattcttcacagactccacttgatcagagatca
cgtaaccctttctcatgtcgcgagcttacaggaacagagccgaaaatgaagcacagtaaa
ccacaagttactggagctatttcacttccaaccgaagaggcaacatcgatggtttctgaa
gtagatgagaccaatttttcggaagattttgaaatggagatgataccaaaaaatattcaa
cctgccgttcagccaccaaaatcaacaagtggatcaaatatgcaatcaacaactagtgta
actgctaactggttaactgaagaaaatctagctaaagctgatgaaacaacttggatagat
gaaactagtccagtttcatttcctccttcatcaaacaagggaaacattctttacttttat
tggtttgatgctcatgaggatttcaaacaactaccaggcattgtttacctatttggcaaa
ctctatgatcactcgaagtctgggacttatgccagctgttgcttgcgcattaaagacctt
gaaagacgcatatttttactaccgcgaacatcatcgcctgaaaatggtgatattcctact
gttaaggatgtttacatggagtttagagatttgacttcacagtataaaattggaaagttt
aggtgtaaaaccactgagaaacgctatgctttcgaatatgcggacgtgccagaaacaagt
gactatttagaggtccgttatgctgcgtcatactcggctttgccagcggatcttcaagga
aaaaccttctctcacatttttgggacgaacacctcttttttggagaacctattgcttgac
ttgcagttacgtggtccctgttggttagaaatcaaagatgcgtcacaggttcagcctcag
ataagttggtgccaaattgattatgaagtcatttggaggtccggaactggatgtccgatc
acgaaattgtccacagttattgaaagccaaaaatcatcagacaatacgtcagatttaatg
aaagtccctccagcaccacctctgtgcttagccgctataaatatcaagtcagttacacaa
aaacattcaagtcattctgagataatttcaatcgggttgctgattgataatgcttatctt
cttgatagaccgatagagaagagtctttttcaaacacattatttggttttggcacctcct
aaagatgcagctttaccgtatgatcttcgaacaaaattaccaagctatggagctcagtac
agtcctccttcttctacttggttatctttaaatccaggagtttcatcaacgccttctact
gtagaaaaatacaagaaccattccaatggtgattcatcaggagctggtggagttgatgtt
gaacctaatgagcgtgcattgttaggcagattcttgactcgcctacataaacttgatcct
gatataattattggacatgatttgtggggacatcaaattgaattactaatccaaagattg
aatgctaataaagttcctcattggcaccgtgtaggacggttacgacgttctgtcaacttc
ccgatgaatttaaacagtcgctcttggattattcgtcattcaatgcctggtcgtcttgtt
tgtgacacaaaagtatctgctcgtgaattggttcgatcaagaacatacaacctttctgat
ctagccagtcaagttttaggagaggttacttctaaaaaggatgacaaatcctcgcaaatt
ggtgtacttccaaaacgtcaaattccacccatcctgatcagtcgactaaatggaaacact
aaatttgtttgtgataatgatctttcaataatgggtgtcggtgcagaattagcagacatt
gaaatagattctgctgatttgcgatgtttgttctctaattccgacctagtccgacagctc
attgatttttgtctttctgatgcacatcttgtccttagactatgccatcagttacaggtt
ttacctcttgctatgcagattacctctatttgtggtaacgtgcttagtcgcactttgtca
ggtggtcgtgctgaacgtaacgaggccctacttcttcacgccttcactcaacacggatac
attgtcccagatccacctgtatctcatcgcggtccgcacagcaatcgtcatgatgaatgg
gatggtattcaggaacaagcagttgaagacgcaggaactggacgtaggaaaccagcttat
actggtggattagtgcttgaaccaaaaaaaggattttatgacaaatacattctacttctg
gatttcaactctttatacccatctattatacaagaatttaatatttgcttcactactgtt
gaccgtgatcttgtggcaactacttcatctgataaagagcccttagatttggatacgatt
gttaccactctaatagctactgttcatggtgattctaatagtatatctgttagcaaatct
gataatgacaaaaagatacgccttccagtcgatcaagaacctggtttattacctgcagaa
attagacgtttagttgaatcacgtaaagaagtaaaaaagttgttggcaaatacatcatct
ggtgatgctgcacaacgtgcacaatggaatactagacaagctgcactaaagttaacggcc
aatagtgtttatggttgtttagggtttgctgcttctcgattctgtgctcgaggtctagct
gccttagttactggtttaggacgtgcagtgcttatgaacactagagatctagtggaaaat
atgaacatggaagttatttacggtgataccgattccattatggttaatactaatacaacg
gatttattagctgcattagctattggtgaaaaaatacgccaagaagtcaataaacactat
cgtctcttagagcttgacacagatggtgtttatgctgctatgttgcttttagctaaaaag
aaatatgcagccttatcagttataaatcctgttcagtgggctacagccgcaaaaatatca
attaatcaaggactaacaccacaagttgtttgtacaaaacaagaaatgaaaggtttggat
attgttcgacgtgactggtcagcacttgctatatctgttggtcgacgatgtgtggctgct
ttattgtctggtgaacctaaagatatcattttagatcgtatacatgctgatttaaccgaa
acagctgaaaaagtgcgtcaaggaaagttacctatttcagaatttattataactaagatg
cttactaaaaatccggaggactattctgatgcaaaaagtcagcctcatgtacaagtagct
ttacgtctcaatggttctgctgcagatgataagaaaactggcacgcgtcgacttcgtgca
ggagacactgtcgagtatgtaatctgcgaagatggttccggacaacttgcgacacatcgt
ggttacagtccaacagaacttaccagttgtttgtataaagtatctgacgattcggaacca
tctacaaaaggaaatctttcaatcgatgtgaattactacttagctcatcaaatacatcct
gttgttagtcgattagttgcacccattgagggtacttctcctgctcgtattgctgattgc
cttggacttgatccatcaggttatcgtcgttctaacgtaactactgttgtagatgaagat
gatgaaaataatccagatattggcttttcctctggattctctagcttcactaattgtgga
gatgtcgaatcactttacatcaattgtccacgaaattgtggtggtcctccaatcgcaatc
aaaacatcagcttttagtgtggttggtaaaacttggttttgtcctacatgttcgcacaat
ttattgctttcacaagattctgctcgccttgttactaatcgcttggtttttgaagcgcgt
cgccttattgtccactatcaattaggttggatgacgtgtgaagatcctgcttgtgctgta
gtcacacgttcgttgcactgtcctccaagttccggtcatcatactattggtgaatccgac
ggtctttgggctcgtggtggacgtcctctctgtggagtatgtggaggtcaggcagcactc
aagtccaattactctgaggcaaagctctataggcagttatgctttttcagatacctagtg
actccaccaaacaataagaatgctggaagtaatgctgatatggaaattactctacctcca
gtggtttccagcattctttcgcaatgccgaaatcattttgatcgactcttgtctcattct
gcatttgcaatggtagacttaggtaaattattttccggtctccgaacaacttgcactgga
cctgggttccgttaa
DBGET
integrated database retrieval system
