Schistosoma mansoni: Smp_180470
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Entry
Smp_180470 CDS
T01095
Name
(RefSeq) cytoplasmic dynein intermediate chain 2, (dhic-2), putative
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
smm
Schistosoma mansoni
Pathway
smm04145
Phagosome
smm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Smp_180470
09142 Cell motility
04814 Motor proteins
Smp_180470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_180470
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smm04812
]
Smp_180470
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
Smp_180470
Cytoskeleton proteins [BR:
smm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Smp_180470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
8340897
NCBI-ProteinID:
XP_018646951
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSDRKAELERKKAKLLAMREEKKKREEIKKIGIHDVEVSDIRQTTDELLKDLGLPEPVLP
QASSIRELESPSIDTVDGILQRNSKKRKNLQISDVFEIAIPPPETIIYSKETQTLEEPQE
RETGRSTDYYVLTYDEGNRDEVDANAALAELEKMPHIGVTKTGQSRGILDKLDGIRTSTD
GVDENTSNDVQRNDSLMNCVSNEFFDERWSKHRTITGLDWSTIFPELLLTAYHMNEEAVH
EPEGVCLMWNMKYPKKLTPEFIFHCQSPVTSASLSRFHPNIVVGGTYSGQIVLWDSRVNK
RTPVQRSPLTSWAHTHPVFAITLIGTQNAHNIISLGSDGSLCAWSLEMLAQPREKSKVCE
MSSGGLFDLYPTCMSFFANDVNNYAVGAENGNAYCGQRHSSRTGVAEETSRHVPYKGHGA
PLTAISTHPSPGAFSFSSLFLTASLDWTVRLWSTREHKPIHTFDDYSDYVYDVCWSPVHP
AVFSAVDGTGNLDIWDMNQDAEIPVARRKLGLSSNVDTSSSSSSNLVGVALNKCRWNTAG
THVAVGDDTGRVTVCSVHESLSQPVTDDWSSFAHVLADLKHYEMEPEVETEA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccggaaagcagagttagagcggaagaaagcaaagcttcttgctatgcgagaa
gaaaaaaagaaaagggaggaaataaagaaaattggcatacatgatgttgaggtctcagac
atacgtcaaacgactgatgaattattaaaggatcttggcttacctgaacccgtgctgcct
caagctagcagtatacgtgaactagaatcaccatctattgatacggttgatggcattctt
caacgtaattccaagaaacggaaaaatttgcaaatttccgatgtttttgagattgcgatc
cctcctccggaaaccataatttatagcaaagaaactcagactctagaagaacctcaagaa
cgagaaacaggtcgttcaactgattattatgtattaacatacgacgaaggtaatcgtgat
gaagtggatgccaatgctgcgttagcggaactggaaaagatgcctcatatcggtgtcact
aaaactggacaatctcgtggaatattagataagcttgatggaatacggacaagtactgat
ggtgttgacgagaatacttcaaatgatgttcaacgtaatgatagtctgatgaattgtgta
tcgaacgaattttttgatgaaagatggtctaaacatcgtacaatcactggtttagattgg
tcaactatatttccagaattattacttacagcatatcatatgaatgaagaagctgttcat
gaacctgaaggtgtttgcttaatgtggaatatgaaatatccaaagaaattaacaccggaa
tttatatttcattgtcaatccccagttacatcggccagtttatcacgttttcatccaaac
attgtagttggtggtacttactctggacagattgttttatgggatagtcgagttaataaa
cgaacaccagttcagcgtagtccactaacgtcatgggctcatactcatccagtatttgca
attacactaatcggtactcaaaatgctcacaatattattagtttaggatccgatggctcc
ttatgtgcatggagtttagaaatgttagctcaaccaagagagaaaagtaaagtttgtgaa
atgtcttccggtggtctgttcgatctttatcctacatgcatgtcattttttgctaacgat
gtgaataattacgctgttggtgctgaaaatggtaacgcttattgtggacaacggcatagc
agtcgtacaggtgttgctgaagaaacttcacgtcatgttccatataaaggacatggtgca
cctcttacagccatctctactcatccaagtcctggtgcttttagtttttcatcgctattt
ctcactgcatcattagattggactgtacgtttatggtctacacgtgaacataaacctata
catacatttgatgattattcggattatgtgtatgatgtatgctggagtcctgtacatcca
gctgtattttctgctgttgatggtactggaaatttagatatatgggatatgaatcaagat
gctgaaattcctgtggctcgtcgcaaattaggattatcaagcaatgtagacacatcttca
tcgtcatcatcgaatctagtcggtgttgctttaaataaatgtcgttggaatactgcgggc
acacatgtagctgttggagatgataccggtcgtgttactgtttgtagtgttcacgaaagt
ctttctcagcctgtcactgatgattggtctagtttcgcacatgtattagctgatcttaaa
cactatgaaatggaaccagaagtagaaacagaagcataa
DBGET
integrated database retrieval system
