Schistosoma mansoni: Smp_194820
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Entry
Smp_194820 CDS
T01095
Name
(RefSeq) DNA repair and recombination protein rad54-related
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smm
Schistosoma mansoni
Pathway
smm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smp_194820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_194820
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
Smp_194820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Rad54_N
DEAD
Motif
Other DBs
NCBI-GeneID:
8342795
NCBI-ProteinID:
XP_018655141
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Position
W:41397015..41429233
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AA seq
832 aa
AA seq
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MITSCRTKRPKCNKNSLHLAAAQTETSFSERHFLRKSEVMCCLQHSTAALMDAKIEWFTH
FGHLLAFLKKPPLKKYRTVLHEKNVPDHSPVDFNSFRKSSPACDYSDPHENLIRNILSKP
FRVPIINYNGSSNDVRVLGVRRNTSRVALHDPFEEDALVLYSPPEVTAHDALKQEATKKL
VHVVVDPMLSKILRPHQREGVKFMYDCVTGVQIPNNHGCIMADEMGLGKTLQCITLIWTL
LRQGPEGKPIIDKAVIVTPSSLLRNWYNEFQKWLHGKIHPLAIDSGSKEDIDSKLAGFLS
QAGRRIPSPILIISYETFRLHASVLHKGSVGLVLCDEGHRLKNSENQTYQALVQLKCPRR
VLLSGTPIQNDLLEYFSLVHFVNMGLLGTASEFRRHYEIPILRGRDADATNEDQKKGEEI
LQEYNCYLIPFEKLLGIVTRCIIRRTQALLTKYLPVKMITYTLVVFYWLYTLFSPLLFSV
SVEQVVCCNLVGSQREVYSDFVKRMAREVSLKMNIADGLRNDKLSISSLASITHLKKLCN
HPDLVYEKMTANTDGFHNALSYFPANYQGSLESNASVKPELSGKFQVLDCLLAVIKSTTS
DKVVLISNYTQTLDLFERLCLQRGYNFVRLDGTMTIKKRAKVVEQFNDPTSRDFVFMLSS
KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRLISTGTIEEKMLQ
RQAHKKALSSCVVDQQEEVERHFSLDDLRELFMYHSETLSDTHDRFKCRRCVNSVQIKPA
PEGTDCNSDFSQWNHCYTKKALNDPVLKATWDTGCISFVFWHYSHEEQRKTV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgataacatcatgcagaactaaaagacctaagtgcaataaaaacagcctgcatttagct
gcagcccaaacagaaacatcattcagtgaacgacatttccttcgaaagtccgaagtcatg
tgttgtctgcaacactctacggctgcacttatggatgcgaaaatagaatggttcactcac
tttggtcacttgctggcttttctcaaaaagccgccgctgaaaaagtacagaactgttttg
catgaaaaaaacgttccagatcattctccggttgacttcaactctttcagaaagtcatca
cctgcatgcgactactccgatcctcacgaaaatcttattcgcaatatattatcaaagcct
tttcgagtgccaattattaactataatggtagttcaaatgatgtaagggtcttgggtgtt
cgtcgtaacacatctagggttgctttacacgacccttttgaagaggatgccctagttttg
tattcacctccagaagtgacagcccatgacgctcttaaacaagaggcgactaagaagtta
gttcacgtcgtcgtcgacccgatgttatcgaaaattcttcgtcctcatcagcgtgaaggt
gtcaagtttatgtatgattgtgttactggtgtacaaatacctaacaatcatggatgtata
atggcagatgaaatgggtcttggcaaaacattgcaatgtatcacattgatctggacatta
ttgcgtcaaggtccggaaggtaaaccaataatcgacaaggcagtgatcgtcacacctagt
agcttgctaagaaattggtacaatgaatttcaaaagtggttacacgggaaaatacatcca
ttggctatcgattccgggagtaaggaagatattgatagcaaattagctggttttctttca
caagccggtcgtcgaattccgtcaccaattttaattatctcttatgaaacgtttcgattg
catgcttccgttttacacaaaggttctgtgggtctggttctgtgtgatgagggtcatcgt
ttaaagaattctgaaaatcaaacatatcaagcactagttcaattaaaatgtccacgtcgt
gtacttctttctggaacaccgattcaaaatgatttactggagtatttcagtttagtacac
tttgtcaatatgggattattgggtacagccagtgaatttagacgtcactacgaaataccc
attttgcgtggacgtgatgcagatgctactaatgaagatcaaaagaaaggtgaagagata
ctgcaggaatataattgttacttaattccttttgaaaagcttttaggtattgtgacacgg
tgtattattcgtcggactcaggctctactcacaaaatatttacctgtgaaaatgatcact
tatactcttgtcgtattttattggctatatactttattttctcccttattattctccgtt
tcagtcgaacaagtagtttgctgcaatttagttggaagtcagcgtgaagtatattcagat
tttgttaaacgaatggcacgtgaagtttcattgaaaatgaatattgcagatggtttgcgt
aatgataagttatcaatctctagtttggcttctataacacatttaaaaaagttatgtaat
catccagatctagtatatgaaaaaatgacagcaaatacggatggctttcataatgccctt
agttattttccggctaattatcaaggctcacttgaatctaacgcttctgtaaaacctgaa
ctatctggtaaatttcaagttcttgactgtcttttggccgtaattaagtctacaacgtct
gataaggttgttcttatttcaaactacactcaaacattagatctttttgaacgtttgtgc
cttcaaagggggtataattttgtacgactagacggtacaatgacaataaaaaaacgagca
aaagttgtcgaacagtttaacgatccaacttcacgtgattttgtctttatgttgagtagt
aaagctggtggctgtggtcttaatttaattggtgctaaccgtcttgttatgtttgatcct
gattggaatccagctaatgatgaccaagcaatggcacgtgtatggcgtgatggtcagaag
aaacagtgctacatttatcgtcttatttcgacgggtaccattgaagagaagatgcttcaa
cgtcaagcgcataaaaaagctcttagcagttgtgtagttgatcaacaggaagaagtcgaa
cgtcactttagtctcgatgatttaagagagcttttcatgtaccattctgagacgttatcg
gatactcatgatagattcaaatgccgtcgttgtgtcaattctgtacaaataaagcctgca
ccagaaggaacagactgtaattcagatttttctcaatggaatcattgttatacaaaaaag
gcgttaaatgatccagtgctgaaagcaacttgggatactggttgcatatcatttgtattt
tggcattattctcatgaagaacaacgtaaaaccgtatag
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