Schistosoma mansoni: Smp_196120
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Entry
Smp_196120 CDS
T01095
Name
(RefSeq) putative transformation/transcription domain-associated protein
KO
K08874
transformation/transcription domain-associated protein
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_196120
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smm01001
]
Smp_196120
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_196120
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_196120
Protein kinases [BR:
smm01001
]
Serine/threonine kinases: Other
PIKK family [OT]
Smp_196120
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
Smp_196120
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
Smp_196120
STAGA complex
Smp_196120
TFTC complex
Smp_196120
TIP60 complex
Smp_196120
SAGA complex
Smp_196120
SLIK complex
Smp_196120
NuA4 complex
Smp_196120
Chromatin remodeling factors
ASTRA complex
Smp_196120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_central
Tra1_ring
NOG1_N
Motif
Other DBs
NCBI-GeneID:
29830108
NCBI-ProteinID:
XP_018655091
LinkDB
All DBs
Position
W:complement(<39692608..>39734273)
Genome browser
AA seq
2430 aa
AA seq
DB search
MRPDSLCGKISAKINKLFCKTTGWSSFSSTLLYLDLDEQLRTGHEICDSLENAASEREIQ
DLTFVIHDKIQYYLMSTAPDNLQESDTQQLRRLCLEIIQKIPNGDHLRPFARSLLEMLFK
LVEVENEENVLVCVKLIIDIHKFYRPSFSNDVSRFLDFVKEVYSDLRFRANKIFEPRYHI
LPKSGFSLKVMQEIPILVVLMYQLFKQHIHQDVSDFIPLIMDFINLKPTEEQKKNANFCQ
EVFIDFMAAQVKTLSFLAYVIKIYQDLVELHSVSLVQGMMNLLVNCPPSVTNMRKEFFIA
ARHILSAQEIRPKFLQVLDELMNEEILIGQGYTIRDALRPLAYSTLADLTHHIRSSLSLS
KIARAIDVYGRNMHDHTLPFSIQQMSLRLILNLVECIRQRAVSATSANQGASSTNAEDQN
NEVFSGTARRLLLQTLHLCVLKAKVVADHYIPALESTCVLETGEEVTSNSAKQRPRSIHA
YLFANISSFSSELNEVGSFTDKSVPASDFSNILNSGTDASKVHEPRIVEPLTKLQLSYTD
VRTLVKALITGIRTVMTSMIQCPHDNTLQTNNITSVSSTSSKQSISNRILSPDELVVVTE
YFSYGMRMIDIVQFVSRDGRLYLRSQPSTKSPDERLLIETFALTFAQLNPISFHEIFSCK
IHDYVVWCNHSASYTNIALHLLSQPNKTSYFGYILLSYLVDRLERLGDGTNESALYMRLL
KLCFSSVNMSGTENELVMKIHLRRIVQGSMHYCLTAKEPTAYLTLLRTLFRSIGGGAHDK
LYLEFFPLLPEMLTTLNRLLRSPHRSNARDLLGELCVIVPVRLSTLLPYLSLLMEPLVYV
LNCNTVNQGLRTLELCVDNMQPDFLHDHLYQVRGDMLLALYNSLHSPSEYVQKMSFKVLG
KLGRFNRTNLLETQRLRISSAEGEAGPQLRFHMNEFRNQPIDIPIRCLVDAAVEVLQDSS
SDEPSKLRSWEFLQSICVAALNLNHLQQSSVGVEDFYYCFLGDTGLNNMILQYIDDICLT
SYSENPSIQSIRPSCCIADDLCNHVMIMTIAGLFLAGLSKELYNTHGDFFAFIVRHATFL
SIMQQFTSLHTEINRDHISCESKTLCKVDAAPKLPFSNDVTTSGDGHFLELDIFSISQDP
DTLTPTANEPQSSNHEFLPNNSSSRLNPNIIIDSIMFVMGHEAKQLTRNMCIFLEIIHNT
AFAILSAVTTSRENSGDHFTIEMIKKAVANLQIFQHIGHVIVDMLYHPAWYVKWGACASI
LYLARFIHPSWFCSNLISLLRGLLYCIHSLSNQMNQGALMMARDCTRIIISMVVISLKDS
NETNHSSHSTVIEEEDVKSGKSTPVSTRKRSSTTSQRRTVQVRRGRSAANTTSESLNSEA
STNVVDEPMEIDDQDNEKEFTPKFSSSLTALLDAVIIELLDSLLSETDSVRTEARCLLRL
LAYTTEQPLCKLLAPHWYKRIGHVLPPKQPNRLLDLPISTQLAVLYLHKNSMSCKNEYIH
ETAFSCLREFISKTSIDIELRHANMKQIVQNIRQNSIRCIHTVRQLAYCAQLFPSTLSER
LCDAIYSHLNTSLEAAVNKQNSASISTFTSSNLELCTLLLDLFHLIPLATSKYVSLLIES
VVNAERLLNIEPTSPLRLPLTRFLSRYPAETCALLLTGSRWPYNSHANRIFLFALSCSQG
QPIVDYLRTNYHILMDLIQPDEISDQKNDSDGQLCLPQVGTLLTFACPRHLAVRAVHTIH
KISLNWLTVNNVSSNDLSKNNSRIKSNQSSVVWETKYHPLVSSLLAYWQSNLFVRRQSNL
TLITLTKDAIGHQGLLNDCITNMFETNQSISSNISGRINIPTESKSTVPVETDNLPCDPA
SLISSGTSDHAHWDEPRLLLDCLLDCFNPIAFGINNSISTEDMYKLLAHLILPCLSNALE
REENEIFLGGPPKPFEMNHYDLVHLFVSVLLEDPAVQTCTELRVMYYQMASLFVYHIPNY
VHMGSACEQSYRLRKFTEFSRPCLTSSLTAVDLQEKYTGLQLLSHLIAKFNVLRTATVQV
FQCLAKGAHTETKKIVNPALDILIPAWIQGPDDQKALALATKKIMLEDHGIQSCVHILGI
IVRHSDLYYPIRHQILPHIILIISRLSVQQLPVEQRRLALDMIYTTAQWDVRCRREITEN
HSKEITDDSNPVDNNNNNLSLTENSNIQTSAKAEPTNSPMDKPQRDQLVNLLIRFACQAI
DASQSGSLSEQSVSRTLAQLEFALRSDVWGGETCELRLAFIDRYFTPDDSSSSHSTLSTS
SGGVPANSLNTHGIHMSGTSNTTPTSTPSGPHTNASSAGALGATQATSLLMTLEVLRVLF
STLESPTLLINVKHFSVGLCNVLTRQLTNVRLIRSCAGLLRAMLERYPAEASHRQKVTAY
PELFDIYSTVLKVIQDSFTMFSEKFLKQHY
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgacagcctttgtggcaaaatatcggcaaaaatcaataagcttttttgtaaa
actacaggttggtcatcttttagctcaactttactgtatttagacttggatgaacagtta
agaactggtcatgaaatctgtgattctttagagaatgcggcctcggagagagaaattcag
gatctgacattcgtgattcacgataagatacaatattatttgatgtcaacagcgccagat
aacttacaagagtctgacactcaacagcttcgtcgtttgtgtcttgaaatcatccagaaa
atcccaaatggtgatcatctaagacctttcgctcggtctcttcttgaaatgttgtttaaa
ctagtagaagttgaaaatgaagaaaacgtccttgtttgtgtgaagctgatcatagacatc
cataaattttatcgaccatcattctcaaatgatgtctcacggtttttggactttgtgaag
gaggtgtacagcgacctacggtttcgagccaacaagatttttgaaccaaggtaccacatt
ctccctaaatctgggttttctttaaaggtcatgcaagagattcccattttagtggtccta
atgtaccagctattcaagcaacatatccaccaagatgtttctgatttcattccattaata
atggattttatcaacctcaaaccaacagaagaacaaaagaagaatgccaacttttgtcaa
gaagtgttcattgattttatggctgctcaggtgaaaactttatcgttcctcgcctacgta
attaaaatataccaagatttggttgagctacactcggttagccttgttcaaggcatgatg
aatttgttggtcaattgtcctccttcagtaacgaatatgcgtaaggagttttttattgcc
gctcgtcatattctcagtgctcaggaaatacgtcctaaatttcttcaagttctggatgaa
cttatgaatgaagagattttaattggacaaggatataccattcgtgatgcgttgagacca
ttggcttacagcacattagctgatcttactcatcatattcgtagttctcttagcctttct
aaaatcgctcgtgccattgatgtctatggtcgcaatatgcatgaccatacactccctttt
tcaattcagcagatgagcttacgtttgatactaaatctggttgagtgtataagacaacga
gcagtttcagccacatctgctaatcaaggggcatcaagcacaaatgctgaggaccagaat
aatgaagttttttccggaactgcaagacgtctgcttttgcagacattacatttgtgtgtg
ttaaaagctaaggtggtggcagatcactacatacctgcattagagtctacatgtgtgttg
gaaacaggtgaagaagtaacgtccaattcagcaaaacagcgtccaaggtccatacatgct
tatctttttgccaatatttcctctttttcgagtgaattaaacgaagttggctcatttact
gataaaagtgtccctgcttcagatttttcaaatattctaaattcggggaccgatgcatca
aaagtgcatgaaccccggatcgttgaaccgttgactaaattgcaacttagctacacagat
gtccgaactcttgtaaaagcacttatcactggtattcgtactgtaatgacaagcatgatc
caatgtccacatgataatacacttcagacaaataatatcacatcagtttcttcaacatca
tcaaagcaatcgatttccaatcgaattctcagcccagatgagttagtagtcgtgacagaa
tatttctcatatggaatgcgtatgatcgacattgtacagtttgttagccgagatggtcga
ctatatttaagaagccagccaagtaccaaatcacctgatgaacgcctacttattgagaca
tttgccctaacattcgctcaattaaatccaatttcatttcatgagattttttcttgtaaa
attcacgattatgttgtttggtgtaatcacagcgcatcctacactaatattgcgctacat
ttactttctcaaccaaataaaacatcatactttggttatattttgttatcctatctagtt
gatagattagaacgtttgggagatggtactaatgaatctgcactttatatgcgattatta
aagttatgtttcagttctgtaaatatgtctggcacagaaaatgaattagttatgaagatt
catttacgccgtattgttcaaggcagcatgcattactgccttacagctaaagagcctaca
gcatatctcactttgttacgaactctatttcggtcaatagggggcggagcacatgacaaa
ctttatcttgaattttttcccttattacctgaaatgttaacgacgttaaatcgtttattg
cgttcaccacatcgttcaaatgctcgtgatctattgggtgaactatgtgttattgttcca
gttcgtttgtccacattactcccctatttgtctctgttgatggaaccgttagtttatgtg
ctgaattgtaatactgtcaaccagggtcttcgtactcttgagctttgtgttgataatatg
caaccagattttctacatgatcacttatatcaagtacgtggagatatgttattggcgttg
tacaattcacttcattcacctagtgaatatgtacaaaaaatgtcattcaaggtacttgga
aaattaggtcgatttaatcgtactaatttgcttgaaacacaacgtttacggattagctca
gcggaaggtgaagccggtccacaactacgttttcacatgaatgaatttcgaaatcagcct
attgatataccgattagatgtcttgttgatgctgctgttgaagtattacaggattcctct
tctgatgagcctagtaaacttcgctcatgggagtttctccagtcaatatgcgtagctgct
ttgaacttaaaccacttgcaacaatcgtcagtcggtgtagaagatttctattattgtttc
ctcggcgatacaggactcaataatatgatattgcagtatattgatgatatatgtttaacg
tcctattccgaaaatccttccattcagtcaattcgtccaagttgttgcattgctgatgat
ttatgtaatcatgttatgataatgactatagctgggctatttttggctggtctgagcaaa
gaattatataatacccatggggattttttcgcgtttattgttagacatgcaacatttcta
tcgattatgcaacagttcacttcacttcatacggagatcaatcgtgaccatatttcatgc
gaatcaaaaacattgtgtaaagttgatgctgcacctaaattaccattctctaacgatgta
actacttcgggagatggccattttctagagctggatatatttagtataagccaagaccct
gatacacttactcctactgctaacgaacctcaatcatcgaatcacgaatttcttccaaat
aactcatcttcccgtttaaatccgaatataatcattgattctatcatgtttgttatgggt
catgaagcgaaacaacttactcgaaatatgtgcatatttctagaaattatacataacaca
gcatttgctatattatccgctgttactacatctcgagaaaatagtggagatcattttact
atagagatgattaaaaaagctgttgcaaatctacaaattttccagcatattggacatgtt
attgttgatatgttatatcatccagcttggtacgtcaaatggggtgcttgtgcttccatt
ctttatcttgctcgtttcattcacccttcatggttctgttcaaatctcatcagtttacta
cgtggcttactttattgcattcatagcttatcaaatcaaatgaatcaaggagccctaatg
atggctcgtgactgcacacgtataattattagcatggttgttataagtttaaaagattca
aatgaaactaatcactcttcacactcaactgttattgaagaggaagatgtgaaatcaggc
aaatccactccagtatctacacgtaaacgctcttcaacaacttcacaacgtcgtacagtt
caagttagacgtggtcgtagtgcagctaatacaacttcagaatcattaaatagtgaagca
tcgaccaatgtagtcgatgaaccaatggaaattgatgatcaagataatgaaaaagagttc
actccaaagttctcatcgtctctgacagctttattggatgcagttatcatagaattatta
gattcacttttgagtgaaactgattctgttcgaaccgaagcacgttgtcttttaagatta
cttgcttatacaactgaacaaccattatgtaagttgttagcgccacattggtataaacgt
attggacatgtcttacctccgaaacaaccaaatcgtctactggatttacctatttcaact
caattagctgtactgtatttacataaaaatagtatgtcttgtaagaatgaatatattcac
gaaacagctttttcatgtcttcgagaatttatcagtaagacatctattgatattgaatta
agacatgctaatatgaaacagattgtgcaaaatattcgacaaaattctatacgatgtatt
catacagttcgacaactagcttattgtgctcaattatttccgagtacacttagtgaaaga
ctatgtgatgcaatttattcacatttaaacacatctttggaagctgcagttaacaaacaa
aactctgcgtcaatctccacgttcacttcatctaacttggaattatgtacattattgttg
gatttatttcacctgattcctttggcaacttcaaaatatgtttcgcttttgattgagtct
gtagtcaacgctgaacgtttattgaacattgaacctactagtcctttacgtttaccttta
acacgcttcctatctcgttatccagctgaaacatgtgctctcctactaactggttcacga
tggccttataattcacatgcaaatagaatattcttgtttgctcttagttgttcacaaggt
caacctatagtggattatttaagaacaaattatcatatacttatggatcttattcaacca
gacgaaattagtgatcaaaaaaatgattcagatggacaattatgtttacctcaagttgga
actcttttgacatttgcatgtccaagacatttagctgttcgtgcagttcatacaattcat
aaaatatcattaaattggttaactgtcaataatgtttcatctaatgatttatctaaaaat
aattcaagaatcaaatcaaatcaatccagtgttgtatgggaaaccaaatatcatccatta
gtttcatctttattagcatattggcagtcaaatttattcgttcgacgacaatctaattta
actttaatcaccttgactaaagatgcaattggacatcaaggattattaaatgattgtatt
acaaatatgtttgaaacaaatcaatcaatttcatcaaatatatctggtagaataaatata
cccactgaaagtaaatcaactgttccagttgaaacagacaatttaccttgtgatcctgct
tcattaatctcttcaggtacatcagatcatgctcattgggatgaaccaagacttttgttg
gattgtttattagactgtttcaatccaattgcttttggaataaataattcaatttcaaca
gaagatatgtataaattattagctcatcttatactgccatgcttatcaaatgctttggaa
cgtgaagaaaatgaaatatttcttggtggacctccgaaaccttttgaaatgaatcactat
gatttagtacacttgttcgtctcagttttactagaagatccagctgttcaaacatgtact
gaacttcgtgttatgtattatcaaatggctagtttatttgtttatcatataccgaattat
gttcacatgggaagtgcttgtgaacaaagttatcgccttcgtaaattcactgagttctcc
cgtccttgtttaacaagtagtttaactgctgtggatcttcaagaaaaatatactggtctt
caattattatctcatttaattgcaaaattcaatgtgttacgtacagctactgtacaagtg
tttcaatgtttagcaaaaggcgcacatacagaaacaaagaaaattgttaatcctgcatta
gatattttaattccagcctggatacagggacctgacgaccagaaagcacttgcgttggca
actaaaaaaattatgctagaagatcatggtattcaatcatgtgttcatattctaggaata
attgttcgacattcagatttgtattatccaatacgccatcaaatattacctcatattatt
ctcattatatctcgactatctgttcaacagttacccgttgaacaacgacgattagcttta
gatatgatctatactacagctcaatgggatgtgcggtgtcgccgtgaaataactgagaat
cattcaaaggagataactgatgattcaaatccagtagataataataataataatctgtca
ttaacagaaaattcgaatatccaaacgtcagctaaagctgaaccaactaactctcctatg
gataagccccagcgtgatcaacttgtgaatctcttaattcgcttcgcctgtcaagctatt
gacgctagtcaaagtggaagcttatctgaacagtctgtatcccgaacactagctcaacta
gaattcgctcttcgctctgatgtatggggtggtgaaacctgtgaacttagacttgcattt
attgaccgttatttcactccggatgattcatcgtcttcacactcgacgttgagtacttca
tctggaggagttccagctaatagtctcaatacacacggaatacacatgagtggaacatca
aacactacaccgacatctactccgtctggaccccacacaaatgcatcatctgctggtgct
cttggtgcaacacaagccaccagtttattaatgactttggaggttcttcgtgtcttgttc
tcaactttggaaagcccaactttattaatcaatgtaaaacatttcagtgttgggttatgt
aatgtattaacacgacaattgactaatgttcgtttaattcgttcttgtgctggtctttta
cgtgctatgcttgaacgttatccagccgaagcatcacatcgtcagaaagttactgcttat
cctgagttatttgatatttattccacagttttaaaagtaatacaagattcatttacgatg
tttagtgaaaagtttctaaagcaacattactaa
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integrated database retrieval system
