Schistosoma mansoni: Smp_196840 Help Entry Smp_196840        CDS       T01095                                  Name (RefSeq) hypothetical protein   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism smm  Schistosoma mansoni Pathway smm04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:smm00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     Smp_196840  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:smm00536]     Smp_196840 Glycosaminoglycan binding proteins [BR:smm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    Smp_196840 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  29830150 NCBI-ProteinID:  XP_018648711 LinkDB All DBs Position 1:<36897960..36938107 Genome browser AA seq 1533 aa AA seqDB search MILRIIIGSHLQLEYLSRESQSSQLFDVHPRDLKTQSGKTLEKAIFKTRLNDGLWHRVAV SIGTTTARLLVDCKQREFINYNRSSTSIDNRGRIQVLKDGIHGFIEDFYLLPGEEGVIKQ CDVYSPNCLDDQMMGDEGDKDTDPMQGPAGSMGDIGPPGDKGEPGLNGSSVAAGEPGPPG PMGSLFIIPLNLGVGSSSFARAATFRDLLQKHLLSLKGVRGARGMTGITGPEGGPGEPGV KGEVGHPGDTGYQGPRGPMGPPGRQGSSGPPGLDGSRGEPGPSGMKGEDGRPGDSGLIGL KGDKGELGPPGPKGDQGLPGEEGPRGPHGDIGDQGDPGLPGVRGPVGQPGPQGPRGKPGN QGPRGRKGELGEPGLPGLPGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVPGTDGL PGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPVGVPGD PGPKGVKGDVGISGPVGSPGVTGMKGDPGPPGPVGQRGDPGTKGLPGAVGTPGPPGPDGE RGPSGLTGRRGRGGDKGDIGPPGSPGETGQQGQRGAPGPRGPPGRFGPPGMKGDAGPVGP VGSVGPIGEQGLQGPVGPPGPIGPPGSTGREGPVGFPGPRGEPGERGPAGQPGSLGNTGP PGPIGDPGPEGQQGPVGPTGPTGDPGKDGMPGRDGQPGPKGVRGSPGVLGNQGVRGFPGF DGMPGRPGPAGVKGELGPDGEVGPIGDKGYQGDSGIIGPIGPTGPMGARGPPGPAGVKGL TGEDGPLGLIGSPGPRGPPGRLGPIGPLGPPGFDGEKGDKGASGPPGPKGDKGGVGIRGP FGPVGSPGLPGIQGPPGLPGQAGEEGPEGLVGPEGSRGLPGAPGAPGMVGVTGLPGIAGE KGDQGSQGPIGRRGLPGTVGVPGPAGQPGSVGVPGPVGQQGERGTQGEDGPPGPRGVEGS PGVQGPLGPKGQEGPRGPQGVPGDIGTPGPDGPKGELGPLGIPGPQGPTGPPGPKGVQGS VGEDGPPGPQGPLGKQGLRGLPGPLGPPGPPGMTGPQGRTGPQGPKGMKGETGEQGVPGE PGRTGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGERGSEGLQGKQGDPGIPGDRGPKGS KGTYGPVGPLGPPGPKGEQGVPGLEGARGVVGLKGERGPVGPAGDPGQPGPSGPIGPEGP AGHPGPPGLPGVPGQKGSSGPAGPPGPPGPIKVLDMSEGYYRFEDTPRVRRSISDALYHN QYYSKQDPDESITPNTIPSVGAVLRRIYARIESLEASMNSFERPMGTQQNPARHCRDIFE AAEFPETSKSGTYWIDPNLGSPTDAFTVECRFQNKGNVAETCIKPSEDTKTQPLTNFVKT NNSKDWWISQLKQQKQNGTMHKTQLYYAPINQIRYLQLLHSKAEQIITFTCRNTPVYFDV KNQNYKNAVIVKLFDENVIDTYEDRRTRTIGGGIMLDIKVKDECMERSKQKASSVFEFVA RKPNLLPLVDIQLKEFGESDQEIGYYMDAVCFS NT seq 4602 nt NT seq  +upstreamnt  +downstreamnt atgattttacgcataataattggctcacatttgcaattagaatatttatcaagagaatca caatctagtcagctttttgatgtgcatcctcgagatttaaaaacacagtcaggaaaaaca ttagagaaagctatttttaaaactcgtctaaatgatggcctatggcatcgtgtggctgtc agtattggtactactacagcaagattactggttgattgtaaacagagagagttcataaat tataatcgttcatcaacaagtattgataacagaggtcgaatacaagtattgaaagacggc attcatggttttattgaagatttttatcttctacctggtgaagaaggtgttattaaacaa tgtgatgtttattcacctaattgtttggatgatcaaatgatgggagatgaaggagataaa gatactgatccaatgcagggtccagcaggttctatgggagatattggcccaccaggtgac aaaggtgaaccaggtttgaatgggtcatccgtagctgctggtgaacctggtccacctggt cctatgggttcgctattcatcattcctctcaatctaggcgttggtagtagtagttttgca cgggcagctacatttcgggacttgcttcaaaaacatttgctttccttaaaaggtgtacgt ggagctagaggaatgactggtattactggtccagaaggaggtcctggtgaacctggtgtt aaaggggaagttgggcacccaggtgatacgggataccaaggacctcgtggaccaatggga ccgcctggacgccaaggttcaagtggaccaccaggattagatggtagtcgtggagaacct ggtccatcaggaatgaaaggggaagatggacgccctggtgattctggacttataggcctt aaaggagataaaggtgaattagggcctcctggtcccaaaggtgatcaaggtcttccaggt gaagagggaccacgtggacctcacggagatatcggggatcaaggagacccaggtttgcct ggagtacgtggtcctgttggtcagccgggtccgcagggcccgagaggaaaacctggaaat cagggtccacgaggacgtaaaggtgaactaggagaacctggtcttccaggtttgccaggg ccagcaggccccataggaacatctgggccagaaggtatggctggtccgcgaggtccaaca ggtgtcgctggtcagcgtggacgctctggtccttcaggagttccaggaactgatggtctc ccaggatttccaggtcccaagggagatgtaggacctaagggagatacaggtccgaatgga tcaaaaggtgatacaggtattcaaggaccaagaggttataaaggtgaacggggtcgatcc ggtccggaaggtgcaaaaggggagagtggaaaaccagggcctgtaggagtgcctggagat ccaggtccaaaaggagtgaagggagacgttggaatatctggccccgttggatcaccagga gttacaggtatgaaaggtgatccaggtccacctggtccagttggacaaagaggagacccc gggaccaaaggtttaccgggtgctgtcggtactccaggtccacctggtccagatggggaa agaggtccatcaggtttaactgggagacgaggtcgaggtggtgacaagggagacatagga cctccaggttcaccgggcgaaacggggcagcaagggcagagaggggctcctgggccacga ggtccaccaggaagattcggcccaccgggaatgaaaggagatgctggtccagttggccca gttggatctgtcggaccgattggtgaacaaggtcttcaaggccccgtcggacctcctgga ccaataggaccaccaggttcaactggaagagaaggacctgttggatttcctgggccacgt ggagaaccaggtgaacgtggaccagcaggacaacctggtagtctcgggaacactggacca ccgggtcctataggcgatccaggacctgaaggacaacaaggtccagttggaccaacaggt ccaactggagatcctggaaaggatggtatgccaggtcgtgatggtcaacctggtcctaaa ggtgtaagaggttcgccgggagtacttggtaatcaaggagttcgaggattcccaggattt gatggtatgccaggtcgacctggaccagctggtgtgaaaggtgaactaggacctgatgga gaagtgggacctattggagataaaggctaccaaggcgattctggtattatcggcccaatc ggaccaacaggtccgatgggagcaagagggccaccaggtccagctggagtcaaaggttta accggtgaagatggtcctttaggattgataggatctcctggaccaagaggaccgcctggt cgattaggtcctattggaccattagggccccctggttttgatggtgaaaagggtgataag ggtgcatcaggaccaccaggaccaaaaggagataaaggaggagtgggtatacgtggacct tttggaccagttgggagccctggattacctggaatacaagggccaccaggactccctgga caagctggtgaggaaggacctgagggattggttggtccagaaggatctagaggattgcca ggagcaccaggtgcacctggaatggtaggtgtcacaggtctaccaggaatagcaggagaa aaaggagaccaaggatcacaaggtcctataggtcgacgcggtttacccggaacagttgga gtccctggcccggctggccaacctggaagtgttggcgtacctggtcctgtcgggcaacag ggcgaaagagggactcagggagaagatggaccaccaggacctcgaggtgttgaaggaagt cctggagtacagggaccactaggaccaaaaggtcaagaaggtcctcgcggtccacaagga gtacctggtgatatagggaccccaggacctgatggaccaaaaggagagttgggtccttta ggaatacctggacctcaaggaccaacaggacctcctggaccaaaaggtgttcaaggatca gttggagaggatgggcctcccggaccacaaggtcctcttggaaaacaaggtttgagaggt ctacctggacctctaggaccacccggacctcctggtatgaccggtccccaaggacgtact ggacctcagggtcccaaaggtatgaaaggcgaaacaggtgaacaaggagtacctggtgaa ccaggacgcactgggcctgtaggatcccctggacccccgggatctttgggcagtcctggc cagcaaggtgtaccaggggtaatgggtaaacaaggaaagacaggagaacgaggatcagaa ggactgcagggcaagcaaggtgaccctggtataccaggtgaccgtggtccgaaaggtagc aaaggaacttatggtccagtcggtcctttggggcctcctggaccaaagggtgaacaaggt gttcctggacttgagggcgcacgaggtgtggtcggccttaaaggagaaaggggtcctgtc ggacctgctggagacccagggcaaccaggtccatctggaccaatcggtcctgaaggtcca gctggacatcctggtccaccaggattacctggtgttccaggtcaaaagggttcatctggt ccagcaggaccacccggacctccgggtccaatcaaggtcttagatatgagtgaaggttat tataggtttgaggatacacccagagttagacgtagtatttcagatgctttataccataat caatattattcaaaacaggatccagatgaaagtattacaccgaatacaataccatcagtt ggtgcagtactacgtcgtatatatgcaagaattgaaagtttagaagcgtctatgaatagc tttgaacgtccaatgggtacacaacaaaatccagctagacattgtcgtgatatatttgaa gctgctgaatttccagaaacttctaaatctggtacgtactggattgatccaaaccttggt tcaccaactgatgcattcacagttgaatgcagatttcagaataaagggaatgttgctgaa acatgcattaaaccaagtgaagatacaaaaacacaacctcttacaaattttgttaaaaca aataactcaaaagactggtggatttcacaattaaaacaacagaaacaaaatggaacaatg cataaaactcaactatattatgcaccaataaatcagattcgttatctacaattattacat tcaaaagctgaacaaattatcactttcacatgtcgtaatacaccagtatattttgatgtg aaaaatcaaaattataaaaatgcagtaattgttaaattatttgatgaaaatgtaattgat acttatgaagatagacgtacacgtactattggtggtggtattatgttagatattaaagtt aaagatgaatgcatggaacgaagtaaacaaaaagccagtagtgtatttgaatttgttgcc cgtaaaccaaacttacttccattagttgatattcaattaaaagaattcggagaaagtgat caagaaattggatattatatggatgctgtttgttttagttaa

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