Schistosoma mansoni: Smp_198870
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Entry
Smp_198870 CDS
T01095
Name
(RefSeq) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smm
Schistosoma mansoni
Pathway
smm00061
Fatty acid biosynthesis
smm00071
Fatty acid degradation
smm01100
Metabolic pathways
smm01212
Fatty acid metabolism
smm04146
Peroxisome
Module
smm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Smp_198870
00071 Fatty acid degradation
Smp_198870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Smp_198870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smm01004
]
Smp_198870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smm04147
]
Smp_198870
Enzymes [BR:
smm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Smp_198870
Lipid biosynthesis proteins [BR:
smm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Smp_198870
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of breast milk
Smp_198870
Exosomal proteins of breast cancer cells
Smp_198870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
FilR1_middle
Motif
Other DBs
NCBI-GeneID:
29830282
NCBI-ProteinID:
XP_018646408
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MIYQILFFPLLSFIYLGSCLEVLVIHCYQTRKPVKRKLLLFRPQPFEPFELSQSRFNSPF
AYKRSTYPNAYRKCFPIDHSRSFISVHLNQQSIISDPKTGARRSPIVKKFTDESRVQTVK
DIFEYGLSNSRSNRCLGKRPSFNDPYSWLTYNEVDERIRAIGSALSKVVEFKHDSENVIG
IYAPNSPEWVIMQHACAAYSYTIVPLYPTLGDEAMQHILSQTEMNCVLCASGREALHLMD
KFESSLEILIIISNDSKFEEVKSRYSSKVSIYLFEELMKLGMNELLLKKSPLPTDLYMIS
YTSGSTGLPKGVLISHKEITRSAISLHESIEFKFVNSNSVHLSYLPLPHIMEQIALLSHI
LMGASSGFLTESIDRLLDDIEILRPTSLVVVPRVLSRLYTKYQDALGDSAMKKRLYNYIV
KKKLAEQKRGKFYHRSVLDTMLFGKLRKKFGGRVCCLVTGSAPLSPELSKFAHAAFGPIF
EGYGATEAIGCITLTSVGEYRLGTVGGVVYGVELKLVDVPDLDLVVSRDGRGEICARGDQ
CSKGYFKDPVKTAELIDSDGWIHTGDIGEWTEEGSLKIVDRVKSIFKLAQGEYIAPEKIE
MVYQYCRLISQIFIDGNSQKNYPVAVVVPDFTELRSSLSNGKILQNHKKLSDSELCRNET
VNKFVLEKMNAVATQKLLKGFEKIPNKAKMPRQAELICPEDQTPIRGTCKPADAESYVDC
SSLKEVTKKSKHHSKKSSQTTHSNSKEKPLKTKHAKNRNESSVIISPKLSSDVSQSNSAD
KEGFEKEIILDKSKREHGETRHEKRSKHDEANSEVNVDQSVIKESVRKHKHRDKPHGSSK
MSMVDGMAHRSTKSVICGDNCRQDAPTSVKEQSFEVIPRPYTYEPVPGTPSSASRCSSHI
SRSSSCSQSPIRSGKHEMHRAHDPRFHDKLHRQRYEQNSRSPSMHLRHDHKPDLPTRATD
SGHGTNPEEKYNSLKRTQSSVSSPSKSKRYNSATLSYGYRQSTQRHHLSPSHRSHSRHHG
PHRERSRSGSERYESRRTSTYRTSDKQHIHSKTYLAKTKPRYHNPDDNPDLHEISYSKNY
ERRHIRDSNSTKRHGSGIHRRENIESLSPSPRISKHFRETYEPQHHSTRQQVNNVSIYGQ
NS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaattcttttttttcctctattatcgttcatatacctaggttcttgcctg
gaggtattggtgatccactgctaccagacacggaagcccgttaagcgaaagcttcttcta
ttccgtcctcaaccatttgaaccatttgaactaagccaatcaagattcaattcacctttc
gcctataaacggtcaacctatccaaatgcctatagaaaatgtttcccaatagatcattca
agatcgtttattagtgttcatttaaatcagcagtcaataatatccgatcccaaaactggt
gcacgaagatctccaattgttaagaagttcaccgacgaatctcgtgtacaaacagtcaaa
gacatttttgaatatggcttaagtaattcgaggtctaatcggtgtctggggaaacgaccg
tctttcaatgatccatactcgtggctaacttataatgaagtggatgagcgaattagagct
atcgggtcggcgctctcaaaagttgtggaatttaaacatgacagtgaaaatgttatcggg
atttatgcaccaaattcaccagagtgggttattatgcagcatgcatgtgcagcatattct
tataccatcgtacctttgtatccaactctcggcgatgaagctatgcaacatattctatct
caaacggaaatgaactgcgtgctgtgtgcttcaggacgtgaagctcttcatttgatggac
aaatttgaatcttctcttgaaattttaatcataatttcaaatgattctaaatttgaagaa
gttaaatctcgttatagttcgaaagtttcaatttacttgtttgaagaattaatgaaactg
ggaatgaatgaacttttactgaaaaaaagcccgttaccaacagacctttatatgatttcc
tacactagtggaagtactggtttgcctaaaggagttctgattagtcacaaggaaattaca
cgttccgcaatttcgcttcatgaatctattgaattcaagtttgtcaattctaattcagta
catctctcatatctcccactgccacatattatggaacaaatagcattgttgtctcatatt
ctaatgggagcttcttctggatttctaacagaatctattgatcgtctactggatgatatt
gaaattttgagaccaacttcactggttgtagttccacgtgtgctttctcgtttgtacaca
aaatatcaagatgcattgggtgattccgcaatgaaaaagcgtctttataattatattgta
aagaagaaattagctgaacaaaaacgtggaaaattttatcatcgaagcgttttggacaca
atgttgtttggtaaacttagaaagaaatttggcggacgtgtatgttgcttggttaccggg
agcgccccactgtctccagaactctcaaagttcgcacatgctgcattcggcccgattttt
gaagggtatggagcaacggaagcaatcggatgcatcactttaacatcggtcggagagtac
cgtttaggtactgtcggtggtgtcgtttatggtgtggaactgaaacttgttgatgtccca
gatttggatttggttgtatcacgtgatggaaggggcgagatatgtgccagaggcgaccag
tgcagcaaaggttattttaaggatccggtaaaaactgccgaacttattgatagtgatggt
tggattcatactggggatattggtgaatggactgaagaaggttcactcaaaatcgtggac
cgtgtaaagagtatattcaaattagctcaaggtgaatatattgcacctgaaaaaatagaa
atggtttatcagtactgcagattaataagtcaaatatttatagatggtaacagtcaaaag
aattatccagttgcagtagtagttccagattttactgaattgcgttcctctctaagcaat
ggtaagatactgcaaaatcataaaaaactttcggattctgaactttgccgaaacgaaact
gtcaataaatttgttttggaaaaaatgaatgctgtagcaacacaaaaacttttgaagggt
ttcgaaaagataccaaataaagctaaaatgccccgacaagcggagcttatctgtccagaa
gaccaaacacccatacgagggacttgtaaaccagcggatgctgagtcatatgtcgattgt
agttcacttaaggaagtaacgaaaaagtccaaacaccattcaaaaaaaagttctcaaact
actcactcaaatagtaaagagaaacctctgaaaacaaaacatgcaaagaatagaaacgaa
tcctcagtcataatcagtcctaagctgtcttcggatgttagtcagtcgaatagtgcagat
aaagaagggtttgaaaaagaaattatacttgacaaaagcaagcgcgaacatggtgaaaca
aggcatgaaaagcgtagcaaacacgatgaagcgaactctgaggtaaatgttgatcaatca
gttatcaaagaatctgtccgtaaacacaagcatcgcgacaaacctcatggttcgtcaaaa
atgtcaatggtggatgggatggctcatcgttctaccaagtctgtcatttgcggggacaat
tgtcgccaagatgctccaacttcagtcaaagaacaaagctttgaagttattccacgtccc
tatacttatgaacccgttccagggacaccgtcatccgcttctagatgttcttcacatatt
tcgcgttcatcttcttgtagccaatccccgatacgctccggaaaacatgaaatgcaccgt
gcccatgacccacgttttcatgataagttacataggcagaggtatgagcaaaacagtaga
tcgccatccatgcatttacgtcatgatcacaaacctgatcttccaacacgggccacagat
agcggtcacggaactaatcctgaagaaaagtataattcattaaaaagaacgcaatcatct
gtcagttcaccttcaaagtcaaagcgatataattcggctactttaagttacgggtatcgt
caatcaacacaacgtcatcatttatccccaagtcataggtctcactcaagacatcatgga
cctcaccgtgaaagaagtcgtagtggctcggaaagatacgaatctcgacgaacatcaaca
tatcgcacaagtgataaacagcatattcactcaaagacttatctcgctaagacaaaacct
agatatcataatccggatgacaatcctgatttacatgagattagttattcgaaaaattat
gaacgtcgtcacatacgtgattctaatagcacaaaaagacacggaagtggaattcatcga
cgtgaaaatatcgagtctttatcaccatctcctagaatctcaaaacattttcgtgagact
tatgaacctcaacatcattcaacacgtcaacaagtcaataacgtaagtatctacggtcaa
aatagttaa
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