Schistosoma mansoni: Smp_199070
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Entry
Smp_199070 CDS
T01095
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
smm
Schistosoma mansoni
Pathway
smm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Smp_199070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_199070
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Smp_199070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_II
MutS_I
MutS_III
Motif
Other DBs
NCBI-GeneID:
29830301
NCBI-ProteinID:
XP_018647118
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MQPNFSMEDGFYSFWKSLGPKPPTTLRCFERGEMMTLHDSDAILVATDYYKNLSLVKRFS
RGKSSLSYVTVKKQNTDFLRHFLLKRQYRIEIYCSTTKCGRDNEWSLKLKASPGDLSSIE
DLLTSTSESVEACGLSAVNIKQLNEQIHVCLAFCDTESQKFLVGEFMDSVHLANLETALV
QLKTRECLVPTGLLSHPDISKSDVTLLDNAISEHVSLVFERTGVLPTEVKKSEFSHIIKP
QDLSYFLRFEKENPNGSLLYEKAMDSFILFKDLVESNIDLDYVNQRNEFIVRADKDPLLQ
EIRNKLDNLEERIRDEFRRCAKILNLEQNKSIKLESNELHGYFMRVTLKDEKCLRGLKTF
EILDTQKGGVRFRNKQMTSLTETYAEVKQEYNGLQEVVVHQVVCAAATYLEPINQLNETT
AFLDVIVSLAIAAISSSGVSYIRPKILSEDNGRIILKEARHPCLEMQDRVSVIPNDIHLE
RGKQIFLIITGPNMGGKSTYIHSVAVIVAMAQIGSFVPCSYAEIMPVDAIMARVGAADYQ
CRGVSTFLAEMLETSSVLRSVTRNSLVIIDELGRGTSTYDGFGLAWAVASFLASPEVGCF
GLFATHFHELTSLAYYMPKRVANLRVLCNVSNDKEIVENKESETKVTMLYKVEAGVCSRS
YGLDVARLAGLPIEVIKQAEHQTSKDEELESVWLNLDKEHIRKYEDELDFFHDSPAVSMA
NELCPRLVEILRHVIEEAELDENLSINMISSRVAHLTRELLLKRPNNVPSDCLLSLIKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatttttccatggaagatgggttttattctttctggaaatcccttggacct
aagcctcctaccactcttcggtgcttcgaaagaggggagatgatgactcttcatgattct
gatgctattcttgtggctacagattactacaaaaatctgtccctcgtaaagcggttctct
agagggaagtcaagcttgtcgtatgtcactgtcaagaaacaaaacaccgactttttgaga
cattttcttctaaagaggcaatatcgcattgaaatatattgttctacaaccaaatgtggg
agagacaatgagtggagccttaagttaaaggcttctcctggagacttgagttcaatcgaa
gatcttcttacatccacatcagaatcagttgaagcctgcggactcagtgcagtgaatatc
aagcagctaaatgaacaaatacatgtgtgcctggccttctgtgatactgaaagtcagaag
tttcttgttggtgaattcatggactcagtgcatctagcgaacttggaaactgctcttgtt
caacttaaaacaagagaatgtcttgtccctaccggacttctttcacatccagatatttcg
aaatctgatgtcacacttttggacaatgctatttcagagcacgtcagtcttgtctttgaa
agaactggggttttacctactgaggtaaaaaagtctgaattctcgcacataattaaacca
caagacttgagctatttcctgcgatttgaaaaagaaaacccaaatggctctttgctctac
gagaaagccatggatagcttcattctgtttaaagatctagtggaatccaatatagatttg
gactatgttaaccaacgaaatgagttcattgttcgtgctgataaagatccgttacttcaa
gaaataaggaataaactagacaatttggaggaaagaattcgagatgaatttagacgttgt
gcaaaaatactgaacttggaacagaataaatctatcaagttggaaagcaatgagttacat
ggatattttatgcgtgtcacactcaaggatgaaaaatgtttaagaggactgaaaacattt
gaaattttggacacacaaaaaggtggtgtacgttttcgtaataaacaaatgacttcatta
actgaaacttatgccgaagtgaaacaagaatataatggattacaagaagtggttgtgcat
caagttgtctgtgccgcagctacttatctggagcctattaatcaattgaatgaaaccact
gcgttcttggatgttattgttagccttgctatcgctgctatctcatcttcaggtgtatcg
tatattcgtccgaaaattctctctgaagataatggtcgtattattttaaaagaagcacgt
catccatgtttggaaatgcaagatcgagtcagtgttattccaaatgatatacatcttgaa
cgtggtaaacaaatatttctaattattactggtccgaatatgggtggcaagtcaacttat
atacatagtgttgctgttattgtagctatggctcaaattggcagctttgttccgtgttca
tatgcagaaattatgccagtcgatgctattatggcacgtgttggtgcggctgattatcaa
tgtcgtggtgtatctacatttctagcagaaatgcttgaaacttcatctgttttacgatcg
gtcacacgaaattcacttgtcattatcgatgaattaggacgtggcacatcaacatatgat
ggatttggactagcatgggcggttgcctcatttttagctagtcctgaagttggttgtttc
ggtttatttgccacacattttcatgaattaaccagtttagcatattatatgcccaaacgt
gtagctaatctacgagttttatgcaatgtatcaaacgacaaggaaatcgttgaaaataaa
gaatctgaaacaaaagttactatgttatataaagttgaggctggcgtatgcagtcgtagt
tatggtctagacgttgctcgtcttgcagggctaccgatagaagtaattaaacaagctgaa
catcaaacatctaaagatgaagagcttgaatcagtttggctgaacttagataaagaacac
attagaaaatatgaagatgaactagatttttttcatgactctccagctgtgtcgatggcc
aatgaactatgtccacgtctagtcgaaatactacgtcatgtcatagaagaagctgaattg
gacgagaatttatcaattaatatgattagttcgagagttgctcatttgacgcgtgaactt
ttactaaagagaccaaacaatgtaccaagtgattgcttattaagtttgatcaaaaaataa
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