Schistosoma mansoni: Smp_210520
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Entry
Smp_210520 CDS
T01095
Name
(RefSeq) putative tyrosyl-DNA phosphodiesterase
KO
K04683
transcription factor Dp-1
Organism
smm
Schistosoma mansoni
Pathway
smm03083
Polycomb repressive complex
smm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Smp_210520
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
Smp_210520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smm03000
]
Smp_210520
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_210520
Transcription factors [BR:
smm03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
Smp_210520
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Smp_210520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DUF7254
Motif
Other DBs
NCBI-GeneID:
29830954
NCBI-ProteinID:
XP_018655389
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All DBs
Position
W:49322967..49339704
Genome browser
AA seq
817 aa
AA seq
DB search
MPSALGYRRFVDYESGYKITRTASEVSNKTTKGKWDEHILSCVFSVQTLKHKTRPEGITS
IKEEMDPYGAVSADLFDIPAAEQEITVGSNDQPIVSGNSNLSGVGHSAVSSAGTITVGAD
GTLHFQKAPSGQQGPRVIMLQRSAPGSGPTVPNSPVQRPGLKTVKIITVPGQGAGGKPLK
AAVIPMHMLQRTVKILPAGGQQVINSSGATVTSNFPRVLTIRPQLSSGPTVLTGATAITP
VRPGTLIFSGASSTQFTGSPVSYQSSEDVENQMIIGSGGEIINGAPHGVLTTSGYYDINM
HNAAGFEHSASPAGREEGEEQEQVTTGLKTNGLRRYARCVCNKVKEKGITSYSEVADELV
HEYAAEHPMIPSEQLHYIQKNIRRRVYDALNVLMALNVLQKEKKEIRWVGLPVNMIEECR
RLEEEREKRQISLRNKTVEIQDLIMQLIAFKNLVMRNKINDRCRRDRTVSESHTCGGSRN
IDTDSDKMTSNGTSKIRNEKIPLPFLVISTHRKTVIDCNISTDKLEYLFNFDQAYEIRDE
VDTLKRMGLMLRLGTIHCTQEEYNQCLELVPPSLRFYVEAIYERRQAIVPDFEALHQQRR
LFVEARLAAAAAAGHTDEGGDTMGSGAHAGSVNVHQQLDHSLRSSQRSPIDANSHYTSLF
DTANTNVNEGGLRQLYLNRSPDDEDGGHISGSVSNSGFVPGDTQHYARAAASRGYVVPGG
PGGLLRHRQHTPSSGVSSILNRQFRSDGASRMGSSTLIRTLISDSREMASSVIGVNNEHP
MAHSDDTNDELVDPDEIIEDHGDDEDEDEDDDDMEDV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcactggggtatagacggtttgttgattacgagtccggatataaaatcaca
cgaacagcaagtgaggtgagtaataaaacgacgaaaggaaaatgggatgaacatatatta
agttgtgttttcagtgttcaaactctaaaacacaaaacaagacctgaagggatcacatcg
atcaaagaggagatggacccttatggagcagtatcggcagatctattcgatataccagct
gcggaacaagaaataactgttgggtctaatgatcaaccaattgtatcaggaaattcaaat
ttatcaggagttggacattctgctgtatctagtgcggggactatcactgtaggagcagat
ggaacgttacactttcaaaaggcaccatctggtcaacaaggcccacgcgtcataatgttg
cagaggagtgctccagggtctggaccgactgtgccaaactctcctgttcaacgtccagga
ttaaagactgtaaagataattactgttccgggtcaaggtgctggaggtaaacctctaaag
gcagcagtgataccaatgcatatgctgcaaagaactgtcaaaatacttcctgctgggggt
cagcaagtgataaattctagcggcgctactgtaacatcaaatttcccacgtgttcttacc
atccgtcctcagttatcatctggtcccacagtcttgactggtgctaccgctattacacct
gtgagacctggcacgctgattttttctggtgcttcatcaacacagttcacaggatctcca
gtcagctatcaaagttctgaggatgttgaaaatcaaatgattatagggtctggaggtgaa
attattaatggagctcctcacggtgtacttacaacttctggttattacgatataaatatg
cataatgccgctggcttcgaacactcggctagtccggctggtcgtgaggagggtgaagaa
caggaacaggttacaacaggtctgaaaaccaatggtcttcgacgttatgctcgttgtgtt
tgtaacaaggttaaagagaaaggtataacttcctatagtgaggttgctgatgaacttgta
cacgagtatgctgctgaacaccctatgattccatctgaacaacttcattatattcagaag
aatatccgtcggcgtgtttatgatgcattaaatgttttaatggccttaaatgtacttcaa
aaagagaaaaaggagatccgttgggttggattgcccgtaaatatgatagaagaatgtcgg
cgtttggaagaagagcgtgaaaagcgacagatttctctgcggaataaaactgttgaaata
caagatctcatcatgcaattgattgctttcaaaaaccttgtaatgcgcaataaaatcaat
gatcggtgtagacgtgatcgtacggtttcagaatctcacacctgtggtggatcacgtaac
attgatactgattcagataaaatgacatctaatggtacttcgaaaattcgtaacgaaaag
attcctttaccatttttggtgatatccactcacagaaaaactgttattgattgcaatata
tccactgataagttggaatatttatttaatttcgatcaagcctacgaaatacgcgatgaa
gttgacaccttaaaacgcatgggtttaatgcttcgccttggtactattcattgtacacaa
gaagagtataatcaatgcttagagttggtaccaccatctctgagattttatgtagaggcc
atttacgaacgacgtcaggctattgtacctgactttgaggcgcttcatcaacaaagaaga
ttatttgttgaagccagactagctgccgcggctgcagcaggtcatacagatgaaggtggt
gatactatgggatccggtgctcatgcagggtcagtgaacgtgcatcaacagttagatcac
tccttacgtagcagtcagcgatcaccaatcgatgccaactctcactatactagcctgttc
gatacagcgaatacaaatgtaaatgaaggtggtttacggcagctttatttgaatcgaagt
ccagacgatgaagatggtggtcatatttctggatctgtttctaatagtggatttgtgcct
ggcgatactcagcattatgctcgtgcagccgcatctcgtggttatgttgtaccaggtggt
ccagggggacttttacgccatcgacagcatactccatcttccggagtctctagcatttta
aaccgtcagtttagaagtgatggggcttctcgcatgggttcgtcaaccttgatcagaact
ctaattagtgatagccgtgaaatggcttcttcagtaattggcgtcaacaatgagcatccc
atggctcatagtgatgatacaaatgatgaactagtggatcctgacgaaattattgaagat
catggtgatgatgaggacgaagatgaggatgatgacgacatggaagatgtctag
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