KEGG   Schistosoma mansoni: Smp_210940
Entry
Smp_210940        CDS       T01095                                 
Name
(RefSeq) putative dna polymerase epsilon, catalytic subunit
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
smm  Schistosoma mansoni
Pathway
smm03030  DNA replication
smm03410  Base excision repair
smm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Smp_210940
   03410 Base excision repair
    Smp_210940
   03420 Nucleotide excision repair
    Smp_210940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smm03032]
    Smp_210940
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_210940
Enzymes [BR:smm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Smp_210940
DNA replication proteins [BR:smm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    Smp_210940
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      Smp_210940
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 29830995
NCBI-ProteinID: XP_018654142
LinkDB
Position
W:13280463..13301864
AA seq 2064 aa
MSRSFNYTRKGFPLKSFKKEFDYAKNESDAQISGVKNDIEQPLDAESALNESNEHRYLRA
KANEITDRRYGFEAFVGPGERIGWLVNMHPTDLLDDSKRLVSGIDLYFLQTDGNRFKVSR
PYLPYFYVLVRGGQAAERDANSYLLKRFSGRLAGIEIVSKNDLDLPNHLVGAKATYLKML
FYSVDELVRVRKELAVRIRANRELASSGSSYTDILAEHFRNDDYGIVTNQLSVKQNRSDP
LDNLFDLRESDVPYLTRVCIDLNIFAGCWYVTTCKPGCPPEFKHHEDTVAWPEPVVLAFD
IETTKMPLKFPDPTNDQIIMISYMLDGAGHLICNREILSEDIEDFDYTPRPEFPGHFTVH
NLKTELDCITFFFEHIQRVRPNILVTYNGDHFDWPFIEVRAASYGLSMSEETGFSRQKGT
VGPGRDGSSGEYLSRPAVHIDCLCWVKRDSYLPVGARGLKAVAKAKLRYDPIEVDPELMC
RMAHESPRELANYSVSDAVATYYLYMKYVHPFVFALCTILPLNPDDVLRKGSGTLCEALL
MVQAYAANVIFPHKQTDGESGPNNLLLSDSGISGKFTEDGHLIDSQTYVGGHVEALEAGV
FRADIPVRFRLVPAALEALRADVKRCISRALQAEIASDLFVFTHQICGQVENTLQQLAST
PNRIECPVIYHLDVGAMYPNIILTNRLQPSAVDSGSAAKCADCEFYKPGISCQRFMPWTW
RAELWTASRPEVYRIHAQLSQERFPIKLTDANEKFPKTVMKSFHELSREEQAAVEKKRIT
DYCRRAYKRIHLTRTEERIAMVCQRENSFYVDTVKAFRDRRYKFKGLTKTWKRHYDDACA
ALSAGTGDSNAVKEANAMLVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCHTG
ANIITKSREIVEQIGRALELDTDGIWCILPASFPQNIEFTAVASKPSRISISYPGALLNI
MVQDFFTNHQYHELVDQETLTYKIRSENSIYFEVDGPYKAMVLPAAKEEGKRLKKRYAVF
NFDGSLAELKGFEIKRNGELQLIKIFQSSVFEAFLRGDSLVEAYSSVASVADHWLDVLYS
KGADMPDSELFDLISENRSMSRKLEDYGSQKSTSLSTARRMAEFLGDQIVKDAGLSCRYI
IARQPDGAPVTERAIPLAIFQAEGSIKRHYLQKWLKDSNLDEHTDIREILDWSYYIERLS
SAIQKIITIPAALQQVSNPVPRVSHPDWLLRKLAEKMDTCKQRKLTEVFVLKNPVTNKLQ
EQTTDLPDLETLCSRNDEKVKSTTPIVTRHFPVKRFRSPNGPFKSWREQLGEPPNLDDAN
TSKKLTEWLAFHQAKWHFQLEQRQYFTKSMGNAKINGDSDHGYSFLPSAKRQRGLARYLN
QTRVNLFTAVWQVIEIVPDPGQIGHYTLWVLINSPESGLVPSLNAVDITVSRNFYVNMRT
PKPKDSGPLFRKVSGNVSMGNETRSASGLILPRNHTVYHLYEYNVPESVYTEHASEIATD
LARPDVEGVYELGVPSLFRILMKVGCLCTVDREAFRNNQHGSVSDEGSFNLDQLCFCSLA
QHPYLSGRSLRHLFLFHYQLPSLYLLIVPWTRCGYVCVIDSARINQLPDLNVLYLRQCAK
CFPHFENEEFPPDTLNFEVRIESDAVIGRRIVQRWITSLCKNISSGPNEVNWPLNDEIIG
RRRSPQLPVLSGFPVIQLGGTMDEGESQIGDLEYSTDAYSLLNWQQTAVKRGIRYFLQSE
ARLERQLELARYLHIPVGNIPVSEAPLPVLLTAPSQDIQPPASSINAIELGCDLFYARHL
VKHNHVLWCSSSGRPDLGGKETDDQRLLLEMEESGVVEINRPGLYPYVNVELEFTNLAVN
TLIIANRIPELEGATLLSFDRLSAADRTLEEQLNQGVNLGTHITSYDETAACSAAFRILR
NMVLAWVRDVTQYQNPLADEQIIYFYQWLRSPRSLFYDPALRRTVQKLMKKVFLKLVDEI
THFHVDVIYANFSRLIMSTHRIELPEALARVDYFTQLLRTRQGTLFTHLDLQYVTSWRQL
IWMDSANYAGVKVSYKLFIFRLTI
NT seq 6195 nt   +upstreamnt  +downstreamnt
atgtctagaagctttaattacacacgaaaaggatttccattgaaatccttcaaaaaagaa
ttcgattatgccaagaatgaaagtgacgctcagatttccggtgttaaaaatgacatagaa
caaccactagatgctgaaagcgctctaaatgaatcaaatgaacaccgatatttgagagcg
aaagctaacgaaataactgatcggcggtacggcttcgaagcatttgttggtcctggcgag
cgcatcggttggctcgtaaacatgcatcccactgatttactagatgactcgaagagactt
gttagtggtatcgacctatattttcttcaaacagatgggaaccgtttcaaagtctcgaga
ccttatctcccatatttctatgtgctggttcgtggaggtcaagctgcagagcgtgacgcc
aactcgtatttattgaaacgtttctccggtcgtcttgctggaattgaaattgtttccaag
aacgatttagatttgcctaaccaccttgttggggccaaagctacttatcttaagatgctg
ttttatagtgtggatgagttggttagagttcgcaaggagctagcagttcggatccgagca
aatcgtgagctggcctcttcgggatcttcttatacggatatattagctgaacacttcaga
aatgatgactatggaattgtaactaaccagttaagcgtgaagcagaaccgtagtgatcct
cttgataatttgtttgatctaagagagtcagatgttccctatttaacccgtgtatgcatt
gacctgaatatatttgctggttgctggtatgtcacaacatgtaagcctggatgccctcct
gaatttaaacatcatgaagatactgtggcttggcctgaacctgtagtattggcattcgat
attgagactaccaaaatgcctttaaagttccctgatcctacaaacgatcaaataattatg
atctcatatatgttagatggagctggacatcttatatgcaacagggaaatcctttcagaa
gatatagaggatttcgactacacaccaagaccagagttcccaggtcacttcactgtacat
aatttaaaaacagaattagattgcattacctttttctttgaacatattcagagagttcga
ccaaacatattggttacctataacggtgatcattttgactggccatttatcgaagttcga
gctgctagctacgggctctccatgtccgaagaaactgggttctctcgtcagaaaggtact
gtgggccccggaagagatggaagttctggcgagtacctatcacgaccagcagttcacatt
gactgcttatgctgggttaagcgtgatagttatcttcccgttggagctcgtggtcttaaa
gctgtcgccaaagctaaactacgatatgacccaatcgaagtagatccagaattaatgtgt
cgtatggctcacgaatcacctagagagttggcaaattactcagtgtctgatgcagttgcc
acctactatttgtatatgaagtatgttcatccatttgtattcgcattatgtacaatcctt
ccattaaaccctgatgatgttcttcgtaaaggctctggtacactatgcgaggctcttttg
atggttcaagcttatgcagcgaacgttatctttccccacaaacaaacagatggtgaatct
ggacctaacaatttgttgttgagtgactctggaatttcaggaaagtttacggaggacgga
catcttatcgattcccaaacttatgttggtgggcatgtggaagccttagaagcgggtgtt
tttcgtgctgatatacccgttagatttcgtctagttcctgcagccttggaagcattaaga
gctgatgtcaaacgttgtattagtcgggctctacaggcggagatagcttccgatctattt
gttttcacacatcagatttgtggacaagttgagaacaccttacagcaattggcctccaca
cctaaccgaattgaatgtcctgttatttatcacttggatgttggtgcaatgtacccaaac
attattcttactaatcgacttcaaccatcagctgtcgattctggttctgctgctaagtgt
gctgactgtgaattttacaaaccgggaatatcctgtcaacgtttcatgccgtggacatgg
cgtgcagagctctggacagcctccagaccggaagtttaccgaatccatgctcaactttcc
caagaacgctttcccattaagttgactgacgctaatgaaaagttccccaagactgtaatg
aagtcatttcacgaattgtcaagggaagaacaagctgcagtggagaaaaagcgtatcacg
gattattgccgtcgagcttataaacgtattcacttaactagaactgaagaacgaattgct
atggtctgtcaacgagaaaattctttttatgttgatacagtaaaggcattccgtgaccgt
cgatataaattcaaaggtttgacaaagacatggaagcgtcattacgatgatgcatgtgca
gctctgtccgctgggacaggtgattcaaatgctgtaaaagaggctaatgcgatgcttgta
ctatatgatagccttcaactagcacataaatgtattctgaactctttttatggctatgta
atgcgacgtggtgctcgttggtattcgatggaaatggccggcattgtctgtcatactggt
gctaatatcataactaaatcaagagaaatagtggaacaaatcggtcgtgctttagaacta
gatactgatggaatatggtgtattctacctgcaagttttccgcaaaatattgaatttact
gctgtcgcttcaaagccatctcgtatttcaatttcatatcctggagctctgttgaacatc
atggtgcaagattttttcaccaatcatcagtatcatgaattagttgaccaagagactctt
acttacaaaattcgttctgaaaactccatatattttgaagttgacggtccatataaagct
atggttttgcctgcggcgaaggaagaaggaaaacgtctaaaaaaacgttacgctgttttc
aatttcgatggaagtttggcagaattgaaaggattcgagattaaacggaacggtgaacta
cagctgattaaaatatttcagtcatctgtgtttgaggcgtttcttcgtggggatagttta
gttgaagcttattcatcagtagctagtgttgctgatcattggttggatgtactttactct
aaaggagctgatatgccagattctgaattgttcgatttgatttcggaaaatcgaagcatg
tccagaaaattggaagattatggaagtcagaaatcgacatctctaagtactgctagacga
atggctgaatttttaggagaccaaattgttaaagatgccggtttatcttgtcgttatatc
attgcacgacagcccgatggtgctccagtaactgaacgagctatccctttagctatattt
caggcagaaggatcaataaaacgtcattatcttcaaaagtggcttaaagattcgaatctt
gatgagcatactgatatacgtgaaatacttgattggtcctattatattgaacgcttgtcg
agtgctatccaaaaaattatcacaatcccagcggctttacagcaggtttctaatccagta
cctagagttagtcatcctgattggttacttcgtaaattagctgaaaaaatggatacatgt
aaacaacggaagctaacagaagtgtttgttttaaaaaatccagtgacaaataaacttcaa
gaacaaactactgacttaccagatctggaaacactatgttcaagaaatgacgagaaagtt
aagtccaccacacccatcgtcactcgccatttccctgtaaaacgatttcgatcacctaac
ggtcctttcaaatcatggagagaacagttaggtgaacctccaaacttggatgatgctaat
acttcgaaaaaattgactgaatggctagcgtttcatcaagctaagtggcatttccaatta
gaacagcgtcaatatttcactaaatctatgggtaatgcgaaaataaatggcgattccgac
catggttattcattcttaccatctgctaaaagacagcgtggtttggccagatatttgaac
caaactcgagtaaatctattcacagccgtatggcaggtgattgagattgttccagatcct
gggcaaattggccactatacactatgggttttgattaattcacctgaatctgggttagtt
ccttcgctaaatgctgtagatataacagtatccagaaatttctatgttaatatgcgtaca
ccaaaacccaaggactctggcccactcttccgtaaagtgtctggcaatgtatcgatgggt
aatgaaaccagaagtgcaagtggtcttattcttcctagaaatcacacagtttatcatctg
tacgagtacaacgttccagaaagtgtttacactgaacacgcttcagaaattgctacggat
ttagcaaggccagatgttgaaggtgtgtatgaacttggtgttccaagtttatttcgtatt
ctaatgaaagtaggatgtttgtgtacagttgaccgggaagcttttaggaataaccaacat
ggatcagtttcggacgaaggcagttttaatttggaccaactatgtttctgttctttggct
caacatccatatttatctggtcgcagcctgaggcacttattcttatttcactatcagttg
ccttcactttaccttttgattgtaccatggactaggtgtggttatgtttgtgtaattgat
agtgcaagaattaatcagctaccggatttaaatgtattatatttgagacaatgtgccaag
tgttttcctcattttgaaaacgaagaattccctccggatactttaaattttgaagtgcgc
attgaatcagatgcagttattggtcgtcgtatagtccaacgttggattactagtttgtgt
aaaaatatctcaagcggtccaaatgaagtgaattggccactgaatgatgagataattggg
cgtcgtcgtagccctcaattgcctgttttgtctggatttcctgtaattcagcttggtggt
actatggatgagggtgaatcccaaataggcgatctagagtatagcactgacgcgtatagt
cttttgaattggcaacaaacagctgtaaaacggggtattcgttattttttacagtcggaa
gcacgtctcgaacgtcaattggagttggcgcgttatttacacattcctgttgggaatata
ccagtttctgaagctcctttacccgttttattgactgctccaagtcaagatattcaacct
cctgccagctctataaatgctattgaacttggttgtgatctgttttacgctagacatttg
gttaagcataatcatgtcctttggtgttcgtcctctggtcgtccagatttgggtgggaaa
gaaacagacgatcaacgtcttctacttgaaatggaagaatctggagtagttgaaatcaat
cgacctggtctttatccatatgttaatgttgaattggaattcactaatttggctgtaaat
actttgataatagcgaatcgtattccagaactggaaggtgctacgctattgtcgttcgac
cgtttatctgctgcagatagaactcttgaagagcagttaaatcaaggtgttaatttaggt
acacatattacaagctacgatgaaacagctgcgtgtagtgctgcctttcgcattcttcgc
aatatggttcttgcttgggttcgtgatgttacacaataccaaaatcctttggccgatgaa
caaattatttatttttaccaatggcttcgatcgcctcgttcattattctatgatcctgct
ttaagacgcactgttcaaaaattaatgaagaaagtatttcttaaattggtcgatgaaata
actcactttcatgtggacgtaatctatgcaaattttagtcgccttattatgtctactcat
agaatagaattacctgaagctttagcacgcgtagattactttacacaattattacgtaca
cgccaaggaactctgttcactcacttggacttgcagtatgtaactagctggcgtcagtta
atttggatggattcagcaaattacgctggtgtaaaggttagttataaactgtttattttc
cggttaactatttaa

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