Schistosoma mansoni: Smp_212260
Help
Entry
Smp_212260 CDS
T01095
Name
(RefSeq) putative retinoblastoma-binding protein 4 (rbbp4)
KO
K10752
histone-binding protein RBBP4
Organism
smm
Schistosoma mansoni
Pathway
smm03082
ATP-dependent chromatin remodeling
smm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Smp_212260
03083 Polycomb repressive complex
Smp_212260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_212260
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Smp_212260
Histone modification proteins
HAT complexes
HATB complex
Smp_212260
HDAC complexes
Sin3A-HDAC complex
Smp_212260
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Smp_212260
PRC2.2
Smp_212260
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Smp_212260
Heterochromatin formation proteins
Other heterochromatin formation proteins
Smp_212260
Chromatin remodeling factors
NuRD complex
Smp_212260
NuRF complex
Smp_212260
NuRF complex (fruit fly)
Smp_212260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
29831059
NCBI-ProteinID:
XP_018652867
LinkDB
All DBs
Position
6:complement(580490..595848)
Genome browser
AA seq
415 aa
AA seq
DB search
MPETDAGYEDGVEERVINEEYKIWKKNTPFLYDMVMTHALEWPSLTAQWLPEVTRPEGKD
FSIHRLILGTHTSDEQNHLLIASVHMPNDNAQFDPNSYDVERGEFGGFGAVTGKIEINIK
INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGVCRPELRLRGHQKEG
YGLSWNPNLNGYLLSASDWDINATPKEGRIIDAQTIFTGHTSVVEDVSWHPLHESIFGSV
ADDKKLMIWDTRSGCTTRPSHTVDSHLAEVNCLSFNPFSEYILATGSADRTVALWDLRSL
QMKLHSFESHKDEIFQVQWSPHHETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPEL
LFIHGGHTAKISDFSWNPNDAWVICSVSEDNILQVWQMAENIYNDEELPLTIENE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaactgatgcaggttatgaggatggtgtggaagaacgcgttattaatgaagaa
tataaaatttggaaaaagaatactcctttcctatatgatatggttatgactcacgcccta
gaatggccgagtcttacagcccaatggttacccgaagttacaagaccagaaggtaaagat
ttttctattcatcgacttattctgggaactcatacatctgatgaacaaaatcatttactc
attgctagtgttcatatgccaaatgataatgctcaatttgatcctaatagttatgatgtt
gaacgtggtgagttcggtgggtttggtgcggtaaccggtaaaattgagatcaatatcaaa
atcaatcacgagggtgaagtcaatcgagctcgttatatgccacaaaatccatgtgtaatc
gctactaaaacacctagttctgatgttctggtgtttgattataccaaacatccaagtaaa
cctgatccatctggtgtatgtcgaccggaattacgtttaagaggccatcaaaaagaaggt
tatggtttatcatggaatccaaatttaaatggttatttgttatctgcatcggattgggat
attaatgcaactcctaaagaaggtcgtattatagatgctcaaactatatttactggtcat
acaagtgttgtagaagatgttagttggcatccattacatgaatctatatttggttcagtt
gctgatgataaaaaacttatgatttgggatacacgtagtggttgtacaacacgtcctagt
catacagttgattcacatttagctgaagtgaattgtttatcatttaatccatttagtgaa
tatatattagctactggtagtgctgatcgaactgttgcattatgggatttacgtagttta
caaatgaaattacattcatttgaatcgcataaagatgaaatatttcaagttcaatggtca
ccacatcatgaaactattcttgctagctccggtactgatcgacgtctacatgtttgggat
cttagtaaaattggtgaagaacaatcagctgaggatgctgaagatggaccaccggaatta
ctatttattcatggtggacatacagcgaaaatttcagatttttcatggaatccaaatgat
gcatgggttatttgttccgtatctgaagataatatattacaagtgtggcaaatggctgag
aatatttacaatgatgaagagcttccattgaccattgaaaatgaatag
DBGET
integrated database retrieval system
