Streptococcus macedonicus: SMA_0738
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Entry
SMA_0738 CDS
T01674
Symbol
addA
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smn
Streptococcus macedonicus
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_0738 (addA)
Enzymes [BR:
smn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMA_0738 (addA)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SMA_0738 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCF02029
LinkDB
All DBs
Position
737985..741617
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AA seq
1210 aa
AA seq
DB search
MIFKPFLTSEDISSLQIQEAQSSKKQKRTPEQIEAIYSYGNNILVSASAGSGKTFVMVER
IIDKILRGVTIDQLFISTFTVKAAGELKERIEKKISQALQETTDNDLKNYLNEQMLGLQT
ADIGTMDAFTQKLVNQYGYTLGISPTFRIMTDKSEQDILKNEVFFDLFSDYMTGSDAELF
RQLMRNFSGNRKDSTAFRGIVYKIYDFSQATDNPQKWLAEVFLKGAKTYTDFSAIPDQEV
KDFLTCLHDTADQLQDVTDLEDYKQKTAKGTLTANYKKHLNIIEHLREWAQHFETLYGRD
GLGRLATDVAKLLPAGPAVTVAGTKYPVFKTLQERLTGLKHLETIFKYQPESLPLLELLQ
KFMQDFSEQYLQAKIQENAFEFSDIAHFAIQILEENADIRELYQNKYHEVMVDEYQDNNH
TQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDFQEHPDHGKLILLKENFR
SQSEVLDATNSIFTHLMDEAVGEILYDDTHQLVAGSPAQKESYPENKTQVLIYDIDNNSD
LPSDAEEGQINPNEVKLVAKEIIRLHNEEHVAFEDITLLVSSRTRNDGILQTFEHYGIPL
VTDGGEQNYLKSVEVMVMLDTLRALDNPLNDYALVALMRSPMFSFNEDELARLALQTTED
DHRANLYQKLEHALAGKGSHNELITIALHDKLADFMACFVAWRDFAKWHALYDLIWKIYN
DRFYYDYVGNLPRAEQRQANLYALALRAHNFERTGFKGLSRFIRMIDKVLESENDLADVE
VALPKNAVNLMTIHKSKGLEFKYVFILNIDKKFSIQDLMSPLILSRQNGAGIKYLADMKE
ELETDVFPTVKVSMDTLPYQINKRELRLATLSEQMRLFYVAMTRAEKKLYLIGKASSEKL
VDKYSGKSENNHLPVAERENFMTFQDWVLAIHEAYSKETLPFAVDFVTDEDLTDDKIGKI
EATSVITPDDLSDNRQSENITEALDRLEAVEKLNAKYHAAINLPSLRTPSQVKKLYEPVM
DTDGVDMMTKPYQAQPTFELPDFSKKAKIEATAIGSAMHELMQRIPLSKQVTIADITVAL
AQVSAEDEVKASIRLENVLAFFENSELGQLIQQHTDKIYREAPFAMLKEDPDSKEKFVVR
GIVDGYLVLDDRIVLFDYKTDKYKNSEEIKERYQGQMALYAEALSKSYDRKNVDKYLVLL
GGEQLEVVKL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaaaccatttctaacgtcagaagacatttcttctctacaaatccaagaagcg
cagtcatccaaaaaacaaaaacgtacgccagaacaaatcgaagctatttatagttatggc
aataatattttggtgtctgcatcggctggttctgggaaaacctttgtcatggttgaacgc
attattgataaaattttgcgtggtgtgacgattgaccagctattcatttcaaccttcaca
gtcaaggctgctggggaattaaaagagcgtattgagaagaaaattagccaagctctgcaa
gaaacgactgacaatgatttgaaaaattatctcaatgagcagatgctgggcttacagaca
gctgatattggaaccatggatgcttttacgcagaaattggtcaatcaatacggctacacg
ctaggaatctcaccaacttttcgtattatgacggataaaagtgagcaagatattttgaaa
aatgaagtcttttttgaccttttttctgattacatgacaggaagtgatgctgagcttttt
cgtcaattaatgcggaatttttctggtaatcgtaaggatagcaccgcttttagaggcatt
gtttataaaatttatgattttagtcaagcaaccgataatccacagaagtggttggcagaa
gtatttttaaaaggtgctaaaacttataccgatttttcagcaattcctgaccaagaagtc
aaggattttctgacttgcttgcatgatacggctgaccagttgcaagatgtgactgattta
gaagactacaagcaaaaaacagccaaaggaacacttaccgccaattataaaaagcatttg
aatatcatcgagcatttgcgtgaatgggcacagcattttgaaactctttatggtcgtgac
ggtcttggacgtttggcgacagatgtggcgaaattgcttccagctggtcctgctgtgaca
gttgcaggaacgaaatatcccgtctttaaaaccttacaggagcgtttgactggtttgaaa
catttggaaaccatttttaaataccagccagagagccttccgttgctagagctattgcag
aaatttatgcaagatttttcagagcaatatttgcaagcgaaaatccaagaaaatgctttt
gaattttcggatattgcccattttgccattcagattttggaagaaaacgctgatattcgt
gagctttatcagaataagtatcacgaagttatggtcgatgagtaccaagataataaccac
acgcaagaacgcatgttggagttgttgtcgaatggtcataatcgatttatggtgggggat
atcaagcaatccatttaccgcttccgtcaagccgacccacagatttttaaccaaaaattt
aaagattttcaagaacatcctgaccatggaaaattaattttgttaaaagagaatttccgt
agtcagtcagaagttttagatgcgacaaacagtatttttacgcatttaatggacgaagct
gttggtgagattttgtatgatgacacacatcaattggtcgctggaagccctgctcaaaag
gaaagttacccagaaaataaaacgcaagtgcttatctacgatattgataacaatagtgac
ttgccaagtgatgccgaagaaggacaaattaaccctaacgaagtcaagttagtggctaaa
gaaatcattcgtttgcacaatgaggaacacgttgctttcgaggatattaccttgttagtc
tcatcacgcacgcgtaacgacggtattttacaaacctttgaacactatggtattcctttg
gtgactgacggtggtgagcaaaattaccttaaatcagtcgaagtcatggttatgcttgac
acgctccgcgcccttgataatccgctcaatgactatgccttagtagcgctcatgcgttca
ccgatgttttcattcaatgaagatgagctggcacgccttgcgctacaaacaacagaagat
gaccatagagctaatttgtatcaaaaattagagcatgctttagctggcaaaggaagtcat
aatgaattgataacaatcgctttacatgataaattggctgattttatggcttgttttgtt
gcttggcgtgactttgccaaatggcatgcgctttatgacttgatttggaaaatttacaac
gacagattttactatgattacgtgggcaatttaccacgtgctgagcaacgtcaagcaaat
ttatatgctttagctcttcgtgcccataattttgaacgaactggttttaaaggactctca
cgttttattcgcatgattgataaggtgttagaaagtgagaatgaccttgcggacgttgag
gtggctctgcctaaaaatgcggtgaacttgatgactattcataaaagtaaagggcttgag
ttcaagtatgttttcattttgaatattgacaagaaatttagtattcaggatttgatgtca
cccttgattttatcacgtcaaaatggtgcaggtatcaagtatctagctgatatgaaagaa
gagttggaaacggacgtttttccaacagtcaaggttagcatggataccttgccttaccag
atcaataagcgtgaattgcgcttagctacgctttcagaacaaatgcgattgttttacgtt
gccatgacccgcgcagaaaagaaattgtatttgatcggaaaagcaagctctgaaaagtta
gtggataaatatagtggtaaatcagaaaacaatcatttgccagtggcagaacgtgagaat
ttcatgacttttcaagattgggtattagccattcatgaagcttatagcaaggagaccttg
ccttttgcagttgattttgtcacggacgaagatttgacagatgataagattggtaaaatt
gaagccacttctgtgataacgccagatgatttgtcagataaccgccagtctgaaaatatc
acggaagccttggatagattggaagctgtcgaaaagttaaatgcgaagtaccatgcagcc
atcaatttgccaagtttgagaacgccaagtcaggtcaaaaaactctatgagccagtcatg
gatactgatggtgttgacatgatgacaaaaccctatcaagcacaaccaacatttgaattg
ccagatttttcgaagaaagccaaaatcgaagcgacagccattggttcggcaatgcatgaa
cttatgcaacgtattcctctatcaaaacaggtgacgatagccgatattaccgtggcttta
gcccaagtttcggcagaagatgaggtgaaagcaagtattcgtttggaaaatgttctagcc
ttttttgaaaattcagagcttggtcagttgattcagcaacatacagacaagatttatcgc
gaagcaccttttgccatgttaaaagaggaccctgacagtaaggaaaaattcgttgtccgt
gggattgtcgatggttaccttgtcttagatgaccgcatcgtactctttgattacaagact
gataaatacaaaaatagcgaggaaatcaaggaacgctatcaaggacaaatggctttatat
gcagaagctctcagcaagtcttatgatagaaaaaacgttgataaatacctcgttttgctt
ggtggcgaacagctagaagttgttaaactataa
DBGET
integrated database retrieval system
