Streptococcus macedonicus: SMA_0900
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Entry
SMA_0900 CDS
T01674
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smn
Streptococcus macedonicus
Pathway
smn03030
DNA replication
smn03430
Mismatch repair
smn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMA_0900 (dnaE)
03430 Mismatch repair
SMA_0900 (dnaE)
03440 Homologous recombination
SMA_0900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smn03032
]
SMA_0900 (dnaE)
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_0900 (dnaE)
Enzymes [BR:
smn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMA_0900 (dnaE)
DNA replication proteins [BR:
smn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMA_0900 (dnaE)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMA_0900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CCF02191
LinkDB
All DBs
Position
889792..892899
Genome browser
AA seq
1035 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLEGYVKAAKSLGYQTIGIMDKDNLYAAFHFIEEAKKQSLQP
VVGLELSFAVEETLSLKLYLLAQDTTGYKNLMKISSKQMSSDIQLDELSDYLTGVAIVVP
YFEELETLSLPFDYYIGVDVNSPQKAYEKPIFPLYTVRYFETNEVETLHMLHAIRDNISL
KDAPPASQGQNLLACDILTQAFRETFPQALENQEKLISNIHYEFDTDLKLPRFNRQKPAQ
EELIERIEAGLRAKNLWLPAYQERLKKELSVIHKMGFDDYFLIVWDLLRFGRSRGYYMGM
GRGSAAGSLVSYALDITGIDPVKNNLLFERFLNEERYSMPDIDIDLPDVYRSEFLHYVRN
RYGSLHSAQIVTFSTFGAKQAIRDVFKRFGAPEHELTNITKKISFRDTLTSVYEKNLSFR
QIINSKIEYQKAFAIAKRIEGNPRQTSIHAAGVVMSDDNLTEYIPLKAGEDMMITQYDAQ
AVEANGLLKMDFLGLRNLTFVQRMQEKVAKDYGVTIDIKSIDLEDKKTLELFAAGKTKGI
FQFEQAGAINLLKRIQPRQFEDIVATTSLNRPGASDYTENFIKRRFGQEEVDLIDPLVAP
ILEPTYGIMLYQEQVMQIAQIYAGFTLGKADLLRRAMSKKKADDMQKMESDFLEGAQRLG
RPLETAKDLFSRMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDVMLNYSSADYI
TDALDSQFKVKKIDINTVPYSDKISDGQIYLGLKNLRGVPRDLCYWIIENRPFSCVEDFL
TRLPENYQKREMITPLVEVGAFDQFDKNRRKIIENLDPLFIFVNELGSLFADTSYSWIET
EDYPNAEKYRLEQSLLGVGISPHPLLEIARQSTKDFTALADLQENTEATILVELNQIRVI
RTKTKGEQMAFLSVTDTQKKFDVTLFPETFARFKDELQEGRFYYLTGKIQNRNNRLQMIL
NHIQEASSERLWLLLPNHLHDNEISKILSQYPGNIPVILHYQDSNQTLQSQRHLVQRTTE
LIEALSSYTLKTIYQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccagttagacacgaaaactgtctattcttttatggatagcttgattgactta
gaagggtatgttaaagcagctaaatctttaggttatcaaacaattggaattatggacaag
gataatctttacgcagcctttcattttattgaagaggctaaaaaacaatccttgcagcct
gttgttgggttagagttatcttttgccgttgaggagacactatcgttaaaactctaccta
cttgcgcaagatacaaccggttataaaaatttgatgaagatttcgagtaaacagatgtct
tcagacattcagttagacgaactctctgattatttgactggtgtagccatagtagtgcct
tatttcgaggaattagagacattgtcgcttccttttgattactacattggggttgatgtt
aattctcctcaaaaagcatatgaaaagccgatttttccgctttatacggttcgttatttt
gaaactaatgaggtggaaactcttcacatgctacacgctattcgtgataatattagctta
aaagatgctccgcctgcatctcaaggacaaaatctgttagcttgtgatattttgacacaa
gcgtttagagagacatttccgcaagcgttagaaaatcaggaaaagctcatatcaaacatt
cattatgagtttgacacagatttaaaattgccaagatttaatcgtcaaaagccagcacag
gaagaattgattgaacgaatagaagcgggattgcgagctaaaaatttgtggctgccagct
tatcaagagcgtttaaaaaaagaactatcagttatccataaaatgggctttgatgattat
ttcttaattgtctgggacttgttacgttttggtcgaagtcgcggttattatatgggaatg
ggacgtggttcagctgcgggaagcttggtttcttatgcccttgatattacaggaattgac
ccagttaaaaataacctactttttgaacgtttcttgaatgaagaacgttacagcatgcca
gatattgatattgacctgccagatgtgtatcgtagcgagtttcttcattatgtgcgtaat
cgttacgggagtttgcattcagcgcagattgtaacgttttcaacctttggagcaaaacaa
gccattcgtgatgtttttaaacgatttggggctcctgagcatgaattgacaaatatcacg
aaaaaaatcagtttcagagatactttaacgtcggtttatgagaaaaatctttctttccgt
cagattattaattctaaaattgaatatcaaaaagcatttgcgattgcaaaacgtattgaa
ggcaatccacgtcagacctctatccacgcggcaggggttgttatgagcgatgataattta
acagaatatattccgttaaaagctggcgaagacatgatgattacgcagtatgatgctcaa
gcagttgaggcaaatggtcttttgaaaatggactttcttggcttacgtaatttgacattt
gtccaacgtatgcaagaaaaagttgctaaagattatggggtcactattgatattaaatca
atagatttagaggataaaaagacattagaattatttgcggctggcaagaccaagggaatc
ttccagtttgaacaagctggagcaattaatcttttgaaacgtattcaaccacgtcaattt
gaagatattgttgcaacgactagcttaaaccgaccaggtgctagtgattacactgaaaac
ttcatcaaacgtcgttttgggcaagaagaagtggatttaattgacccattggtagcaccg
attttagagccaacttatggcatcatgctttaccaagaacaggttatgcaaatcgctcaa
atttatgctggcttcactcttggaaaagcggatttgttacgtcgtgccatgtctaagaaa
aaggctgatgatatgcaaaaaatggaaagtgatttcttagaaggagcgcaacgattagga
cgtccacttgaaacggcaaaggatttatttagtcgtatggcaaaatttgctgggtatggt
tttaatagaagccacgcttttgcttattcagctttggctttccaactggcttattttaaa
gcgcattatcctgctgttttttacgacgttatgttgaattattctagcgctgattatatt
acagacgctctagattcacaatttaaagttaagaaaatcgatatcaataccgttccatac
agcgataaaatttcagatggacagatttaccttggcttaaaaaatctaagaggtgttcca
cgcgatttatgctactggattattgaaaatcgtccatttagctgtgttgaggatttctta
acacgattgccagagaattatcaaaagagagagatgattacacctcttgtagaagttggt
gcttttgatcaatttgataaaaatcgtcgaaaaatcattgaaaaccttgaccccctcttt
atctttgtcaatgagctcgggagtctatttgcggatacgtcttatagttggattgagaca
gaagattatccaaatgctgaaaaataccgcttagagcagagtttgttaggcgtaggaatt
agcccacatccgcttttagaaatcgcaaggcaatccacaaaagattttacagcgctagca
gatttgcaagaaaataccgaagcaactattttggtagaacttaatcagattcgtgtcatc
aggacaaaaacgaaaggtgagcaaatggcatttttgagtgttacagatactcagaaaaaa
ttcgatgttaccttgttcccagaaacctttgcgcgtttcaaagatgagcttcaagaagga
agattttattaccttactggaaaaattcagaatcgaaacaaccgcttgcagatgatttta
aatcatattcaagaagcaagtagtgaacgattatggctcttacttccaaatcatctccac
gataatgaaatttctaagatattatcacaatatccaggaaacattccagtgattttacac
tatcaagatagtaatcaaacattgcaaagccaaagacatttggttcaaaggacaactgag
cttattgaagcgctatcaagttatactctgaaaacgatttatcaataa
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