Streptococcus macedonicus: SMA_1020
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Entry
SMA_1020 CDS
T01674
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smn
Streptococcus macedonicus
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smn03032
]
SMA_1020 (topA)
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_1020 (topA)
Enzymes [BR:
smn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SMA_1020 (topA)
DNA replication proteins [BR:
smn03032
]
Prokaryotic type
DNA Topoisomerases
SMA_1020 (topA)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMA_1020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
HypA
Motif
Other DBs
NCBI-ProteinID:
CCF02311
LinkDB
All DBs
Position
complement(1003458..1005599)
Genome browser
AA seq
713 aa
AA seq
DB search
MATTTTTKAQTAVKKSSKKTTKKKTAAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHI
RDLKKSSMSIDFENNYEPQYINIRGKGPLINNLKKEAKKSKKVYLASDPDREGEAISWHL
AHILDLDENDKNRVVFNEITKDAVKNAFIEPRQIDMNLVDAQQARRVLDRIVGYSISPLL
WKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGFFKKGTKKFQASFYGIDGK
KLKLETNEDVQKVLALLTSDEFTVAKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKT
MMVAQQLYEGISLGKSGTQGLITYMRTDSTRISPIAQNDAANFITERFGEKYSKHGSRVK
NASGAQDAHEAIRPSNVNLTPESIAKHLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNL
EQNNVRFTANGSQVKFDGYLAVYNDSDKNKMLPNMVEGDIVKKVSTNPEQHFTQPPARYS
EATLIKTLEENGVGRPSTYAPTLDVIQRRYYVRLAAKRFEPTELGEIVNNLIVEFFPDIV
DVKFTADMEGKLDEVEEGKQQWQKVIDEFYKTFEKELAKAETEIEKIQIKDEPAGFDCDL
CGHPMVIKLGRYGKFYACSNFPECHNTKAITKEIGVTCPVCGKGQVIERKTKRNRIFYGC
DRYPECEFTSWDKPVGRSCPKSGDFLVEKKIRGGGKQVVCSNEECDYEEAKIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgactactacgaaagcccaaacagctgttaaaaaatcaagtaaaaaaaca
acaaagaaaaaaacagctgccaagaaaaatttggttattgtggaatctccagctaaggca
aaaacaattgaaaaatatctcggacgtaattataaagttgtagcctcagtaggacatatc
cgcgatttgaaaaaatcaagcatgtctattgattttgaaaataattatgaaccacaatat
attaatattcgtggtaaaggtccactgattaacaaccttaaaaaagaagcgaaaaaatct
aaaaaagtttatcttgcaagtgacccggaccgtgaaggagaagcaatttcttggcactta
gctcatattttagatcttgatgagaatgacaaaaaccgtgttgttttcaacgaaattact
aaagacgctgtcaaaaatgcctttattgaaccacgccaaatcgatatgaatttagtcgac
gctcaacaagcgcgtcgagttcttgaccgtatcgtgggatattctatttctccgttgctt
tggaaaaaagttaaaaaaggtctttcagcagggcgtgttcagtccgttgcattaaaacta
attattgaccgtgaaaatgaaatcaaagcctttaaaccagaagaatactggacaattgac
ggtttctttaaaaaaggaacgaagaaattccaagcttcattctatggcattgatggcaaa
aaattaaaactcgaaacgaacgaagatgttcaaaaggttcttgccttattaactagtgac
gaatttaccgtagctaaggttgaaaagaaagaacgtcgtcgcaatgcaccacttccttat
acgacatcatctctccaacaagatgctgctaataaaatcaacttccgtacacgtaaaacc
atgatggttgcacagcaattgtacgaaggtatcagtcttggtaagagtggaacgcaaggt
ttgattacctacatgcgtactgactcaacacgtatcagcccaatcgcacaaaatgatgcc
gcaaactttatcacagaacgtttcggtgaaaaatactctaaacacggtagccgtgttaaa
aatgcttcaggagctcaagacgctcacgaagccattcgcccttcaaatgtcaatctaaca
ccagaatcaatcgctaagcacttagataaagaccaattaaaactttacacattgatctgg
aatcgttttgttgccagtcaaatgacagcagcagtctttgacacaatgaaagttaatttg
gagcaaaataacgtacgctttactgccaatggtagtcaagtaaaatttgacggttactta
gccgtatataacgattctgacaagaataagatgttgcctaacatggttgaaggtgatatt
gttaagaaagtgtcaacaaatcctgaacaacactttacgcaaccaccagctcgttattct
gaagcaacacttattaaaacattggaagaaaatggcgttgggcgtccgtcaacttatgcc
ccaacacttgacgttatccaaagacgttactatgttcgcttagctgcgaaacgttttgaa
cctacggaacttggtgaaatcgttaataatttgattgttgaattcttccctgatattgtt
gatgtcaaatttaccgctgatatggaaggtaaacttgatgaagtcgaagaaggcaaacag
caatggcaaaaagttatcgacgaattttacaaaacatttgaaaaagaacttgccaaagcc
gaaacagaaatcgaaaaaattcaaatcaaagatgaaccagctggctttgattgtgatctt
tgtggacacccaatggttatcaagttgggtcgttatggtaaattctacgcttgtagcaat
ttcccagagtgtcacaatacaaaagcaatcactaaagaaatcggcgtgacttgtccagtc
tgtggcaaaggtcaagtaattgagcgtaaaaccaaacgtaatcgtattttctatggttgt
gaccgttatcctgaatgtgaatttacatcatgggataaacctgtcggacgttcttgtcca
aaatctggagacttcttggttgagaagaaaatacgcggtggtggtaaacaagtcgtctgc
agtaatgaagaatgcgactacgaagaagcgaaaattaaataa
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