Streptococcus macedonicus: SMA_1087
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Entry
SMA_1087 CDS
T01674
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smn
Streptococcus macedonicus
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smn03016
]
SMA_1087 (truB)
Enzymes [BR:
smn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMA_1087 (truB)
Transfer RNA biogenesis [BR:
smn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMA_1087 (truB)
Prokaryotic type
SMA_1087 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CCF02378
LinkDB
All DBs
Position
complement(1064796..1065674)
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AA seq
292 aa
AA seq
DB search
MINGIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYM
TEAGKIYRGQICLGYSTTTEDASGECLETTPVSDVAVEEVDLALRSFIGEITQIPPMYSA
VKVNGKRLYEYARAGQTIERPERHVTIYDFKRTSPLEFKDDCCYFDFEVACSKGTYIRTL
SVDLGKKLGYASHMSYLEREASAGLRLENALTLAEITDKVALEDFSFLLPIEYGVMDLPR
VDLTEDQKIKISFGRKIALDRKDEQLAGFYEDKLVAILEPRDDLYKPHKVFI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggaattattaatttaaaaaaagaagcaggaatgacgagtcacgacgcagtc
tttaagcttcgaaaaatattgcatgaaaagaaaattggtcacggaggaacgctagaccct
gacgttgttggagttctgccaattgctgttggtaaagcaacacgtgtgattgaatacatg
acagaagctggcaaaatttaccgtgggcagatttgtctggggtattcgacaacaacggaa
gatgctagtggtgaatgtcttgagacaacgccagttagtgatgtagcagtagaagaagtt
gacttggctttgagaagttttatcggtgaaatcactcaaattcctcctatgtactcagcg
gttaaagtcaacggcaaacgattatatgaatatgctcgcgctggtcaaacaattgagcga
cctgaacgccatgtgacaatctatgatttcaaacgcactagcccgttagaatttaaagat
gattgttgttattttgattttgaagtggcttgtagtaaaggaacttatattcgtacgttg
tcagttgatttaggaaaaaaacttggctacgctagtcatatgtcatatttagaacgcgaa
gcttcagctggcttacgactagaaaacgccttaactttggcagaaatcactgataaagta
gctttggaagatttttcatttcttcttcctatcgaatacggcgttatggatttaccacgt
gttgatttgaccgaagaccaaaaaatcaagatttcttttggacgaaaaattgctttagat
agaaaagatgaacaacttgcgggattttatgaggataagttggtggcaattcttgagccg
cgagatgacctttacaaaccgcataaagtatttatctga
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