Streptococcus macedonicus: SMA_1103
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Entry
SMA_1103 CDS
T01674
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smn
Streptococcus macedonicus
Pathway
smn03420
Nucleotide excision repair
smn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMA_1103 (pcrA)
03430 Mismatch repair
SMA_1103 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_1103 (pcrA)
Enzymes [BR:
smn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMA_1103 (pcrA)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMA_1103 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SMA_1103 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DSBA
Motif
Other DBs
NCBI-ProteinID:
CCF02394
LinkDB
All DBs
Position
complement(1077973..1080288)
Genome browser
AA seq
771 aa
AA seq
DB search
MNPLLNGMNDKQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF
TNKAAREMRERAMALNPATADTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWNERAILGTISNAKNDLLDEVAYENQAGDMYMQIVAKCYKAYQEELR
RSEAMDFDDLIMLTLRLFDQNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASHFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANAVINNNRN
RRPKKLWTQNTDGEQIVYYRARDEREEAVFVASTIDNIVREEGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNVIANTADNISYERIVNEPKRGVGPG
TLEKIRDFANMQNMSLLDASANIMLSGVKGKAAQAVWDLANLLMKLRDDLDQMTVTELVE
AVLDKTGYLDALRVQNTLESQARIENIEEFLTVTKNFDDNQEDAPEDESGIDKLSRFLND
LALIADTDDGDTETAEVTLMTLHAAKGLEFPIVFLIGMEEGVFPLSRAAEDQDELEEERR
LAYVGITRAEQLLFVTNANTRTLFGKTGYNRPSRFIREIDDELLQYQGLARPANSSFGVR
YSNSSDEQLTFGQGMSLQQALQARKAKVQPTSSRGAQPFSKAGKAVPVGQSASASKEAVD
WQIGDIAHHKKWGDGTVLAVTGSGKTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggtatgaatgacaagcaggcagaggctgttaagacaacggaa
ggtccgcttttaatcatggcgggagctggttctggtaagacacgtgttttaacgcatcgt
attgcttacttaattgatgaaaaatttgtaaatccttggaatatccttgcgattactttt
acaaataaagcggcgcgtgaaatgcgtgaacgtgctatggcgttaaatcctgcgacggct
gatacgttgatcgcaactttccatagcatgtgtgtgcgaattttgcgtcgtgatgctgac
cacattggctataatcgcaattttacgattgttgacccaggtgagcagcgcacgctcatg
aaacgtattttaaaaaatctgaatctcgaccctaagaaatggaatgaacgtgcgattctt
gggacaatttcaaatgccaaaaatgatttgcttgatgaggtagcttatgaaaatcaagca
ggtgacatgtacatgcaaattgttgccaaatgttataaggcttatcaagaagaattgcgc
cgcagcgaagcaatggattttgatgaccttatcatgttaacgcttcgtttgtttgaccaa
aatcctgatgttttggcttattaccaacaacgttaccaatacattcatgtagatgagtat
caagatactaaccatgcgcaatatcaattggtgaaacttttggcgtctcattttaagaat
atctgtgttgttggtgatgctgaccaatccatttatggttggcgtggtgcagatatgcaa
aatatccttgattttgaaaaggattatccagaagcaaaagttgttctattggaagaaaat
tatcgttcaaccaagaaaatcttgcaagcagcaaacgcggtgattaataataatcgcaat
cgtcgtccgaaaaaattgtggacgcaaaatactgacggtgagcagattgtctattaccgt
gcacgtgatgaacgtgaagaagcagtctttgtcgcttctacgattgacaatattgtccgc
gaagaaggcaagaacttcaaagattttgcagttctataccgtaccaatgcgcaatcacgt
accattgaagaagctttgttaaaatcaaacattccttatacaatggttggtggaacaaaa
ttttacagccgtaaggaaattcgtgatgtgatttcatacctcaatgtgattgcaaatact
gcggataatatcagttatgaacgtatcgtcaacgaaccaaaacgtggcgttggtcctggt
acccttgaaaaaattcgtgattttgccaatatgcaaaacatgagtttgttagatgcgtct
gctaatatcatgctttctggcgtaaaaggaaaagcagcacaagcggtttgggatttggcg
aatctgctcatgaaacttcgtgatgacttagaccagatgactgttacagaattggttgaa
gctgttcttgacaaaactggttaccttgatgcccttcgtgtgcaaaatacccttgaaagc
caagcgcgtattgaaaatatcgaagaattcttgactgtaactaagaattttgatgataat
caagaagatgccccagaagatgaatctggtattgacaaactaagtcgtttcttaaatgat
ttggctttgattgctgatactgatgatggtgatacggaaactgcagaagtgaccttgatg
actttgcacgctgccaagggattggaatttccaattgttttcttgattggtatggaagaa
ggcgtctttccactttctcgtgccgccgaggaccaagatgaattagaagaagaacgccgt
ttggcttacgttgggattacacgtgcagaacaattgctttttgtaaccaatgctaacaca
cgtactttgtttggtaagacaggctataaccgtccgtcacgttttattcgtgaaattgat
gacgaattattgcaataccaaggtttagcgcgtccagctaattcatcatttggtgttcga
tatagcaatagtagtgatgagcaattgactttcggacaaggcatgagcttacagcaagct
cttcaagcacgtaaagcaaaagttcaaccaacatcaagccgtggagcgcagccattttca
aaagctggcaaagctgttccagttggtcaatcagctagtgcttcaaaagaagcggtcgat
tggcaaattggtgacattgctcaccataaaaaatggggtgacggtaccgttctagccgtt
acaggaagcggaaaaacacaagaacttaaaatcaattttccagaagttggtctcaaaaaa
ctactagccagcgtcgcaccgattgagaagaaataa
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integrated database retrieval system
