Streptococcus macedonicus: SMA_1851
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Entry
SMA_1851 CDS
T01674
Symbol
yrrC
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
smn
Streptococcus macedonicus
Pathway
smn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMA_1851 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smn03400
]
SMA_1851 (yrrC)
Enzymes [BR:
smn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SMA_1851 (yrrC)
DNA repair and recombination proteins [BR:
smn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMA_1851 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
nSTAND3
AAA_25
AAA_22
AAA_28
RsgA_GTPase
SLFN-g3_helicase
AAA_12
PIF1
AAA_14
5_3_exonuc
Helicase_RecD
NPHP3_N
AAA
NTPase_1
TsaE
AAA_29
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CCF03142
LinkDB
All DBs
Position
1793091..1795568
Genome browser
AA seq
825 aa
AA seq
DB search
MEYFFSGTIDRIIFENASNFFKILLLEIEDTDSDFDDFEIIVTGTIADIIEGENYTFWGE
LTQHPKYGEQLRVTRYERSKPTSSGLIKYFSSDHFKGIGKKTAEKIVQLYGDNTIDKILE
DPSKLDSISGLSKENKDNFLTKLKLNYGTELILAKLAEYGLTNRVAFEIFNQYKEDSLDI
IQENPYQLVEDIQGIGFKIADQLAEQLGIEADAPQRFRAALVHSLFETSIERGDTYVEAR
DLLENAITTLEEARQIELDPAAVAKELSTLIAEDKVQNVGTKIFDNTLFYAESGIKKHLT
RILDTPLNQNFSDVDLQEEIADVEEAFGISYDDVQKHAIKEALKSKVFILTGGPGTGKTT
VINGLIAAYADLHQIDLEKKDIPIILAAPTGRAARRMNELTGLPSATIHRHLGLNGDNDY
QAIDDYLDCDLIIIDEFSMVDTWLANQLFSSISSNTQVIIVGDSDQLPSVGPGQVLADLL
KIEALPQLALTKIFRQSEDSTIVTLANQMRLGKLPADFTQKKADRSYFEASAQYIPEIIP
KIVSAAVKSGIDPQEIQILAPMYRGAAGINRLNTIIQDLLNPLKDQLSFAFGEMNFRKDD
KILHLINDAELNVFNGDIGYITDLIPAKYTESKQDELYMSFDGTEVIYPRNEWHKITLAY
AISIHKSQGSEFQVVILPITRQSHRLLQRNLIYTAITRSKSKLVMLGEIAAFDYAIKNEG
AKRNTYLVQRFTSSAQEESIDLQTEISQQTSPKTDNEAEKITSPTSPQTNISKEENIQLT
LDIAENEQTQTEQEPKIYRLTEENLAFINPMIGITQADIEQFFKK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggaatacttcttttctggcacaattgaccgtattatttttgaaaatgccagtaatttc
tttaaaattttattgctcgaaattgaggataccgattcagactttgatgattttgaaatc
attgttactggaacaattgccgatattatcgagggagaaaattatacgttttggggtgaa
ttaacgcaacacccaaaatatggcgaacagctcagagtcacacgttacgagcgcagcaaa
ccaacttcttctggtcttattaaatatttttcaagcgaccatttcaaaggaattggtaaa
aaaactgctgaaaaaattgtgcagctttacggcgacaataccattgataaaatcctagaa
gaccctagtaaattagacagtatttctgggctttctaaggaaaataaagacaacttttta
accaaactcaagcttaattatggtacagagctcattttagccaagttggcagagtatggc
ttaactaatcgtgttgcctttgaaatttttaatcaatacaaggaagacagtcttgatatt
atccaagaaaatccttatcaattggtcgaagacattcaagggattgggtttaaaatcgct
gaccaactcgctgaacaattaggaatcgaagcagatgcccctcaacgttttcgtgccgct
ctcgtgcacagtctttttgaaacttctattgagcgaggagatacttacgtcgaagcgcgt
gatttgcttgaaaatgccattaccacccttgaagaagctagacaaattgagttagacccc
gcagccgttgccaaagaattatcaacgcttatcgctgaagataaggtacaaaatgtcggt
accaaaatttttgacaatactcttttctatgctgaatcaggtatcaaaaaacacctgaca
cgtatccttgatacgccactcaaccaaaacttttcagatgttgacttgcaagaagaaatc
gctgacgttgaggaagctttcggcatttcttacgatgatgtgcaaaaacatgctatcaaa
gaagcgctcaagagcaaggtgtttattttgactggtggtcctggcacgggaaaaacgact
gttatcaacggtttgattgctgcctacgcagaccttcatcaaattgatcttgagaaaaaa
gatattcctatcatcttagcagcgccaacaggacgtgctgcccgccgtatgaatgaatta
acaggcttgccaagtgcgactattcaccgccatttggggttaaatggtgataacgactac
caagctattgatgactatctcgactgtgacttgattatcattgatgaattttcaatggtt
gatacttggcttgccaatcaactctttagttccatttcgtccaatactcaagtcatcatc
gttggagatagtgaccaattgccgtctgtcggtcctgggcaagtattagctgatttatta
aaaattgaagctcttcctcaactagcattgactaaaatctttagacaatcggaagattca
accattgttacacttgctaatcagatgagacttggaaaattaccagctgacttcacacaa
aagaaagctgaccgttcttattttgaagcaagtgcacaatatatcccagaaataattcct
aaaattgtcagcgcagctgttaagagtggcattgacccacaagaaatacaaattcttgcc
ccaatgtaccgtggcgcagctgggattaatcgacttaataccattattcaggatttactt
aacccgcttaaagatcaactctcgtttgcctttggtgagatgaatttccgtaaggatgac
aaaattctccacctcatcaacgatgctgaactcaatgttttcaatggtgatatcggctat
attacagaccttattcctgctaaatataccgaatccaaacaagacgagctttacatgtct
tttgacggcactgaagttatttaccctcgtaatgaatggcataaaattacccttgcttac
gctatatcaatccacaaatcacaaggtagcgaatttcaggttgtcattttgccgatcact
cgccaaagtcacagactcttacaacgtaacctcatttacacagctatcacccgctctaag
agtaaattagtgatgttaggggaaattgccgcctttgattacgccataaaaaacgaaggc
gctaagcgcaacacctatcttgttcaacgctttacaagctccgctcaagaagaaagtatt
gatttacaaactgaaatttctcaacaaacatcacctaaaacagataatgaagctgagaaa
atcacctctccaacttctccccaaacaaatatttctaaagaagaaaacatccaactgaca
ctagatattgccgaaaatgagcaaacacaaacagagcaagaaccaaaaatctatcgcttg
acagaagaaaacttggcatttatcaacccaatgattggcattacccaagccgacattgaa
caattttttaagaaataa
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