Selaginella moellendorffii: SELMODRAFT_100186
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Entry
SELMODRAFT_100186 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_100186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_100186
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
SELMODRAFT_100186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
DUF674
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
9656343
NCBI-ProteinID:
XP_002973976
JGI:
100186
UniProt:
D8RCV6
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MKRAGAPDDAAAAAAKRGRQETEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL
VCGKYFQGRGRKSHAYTHSLEAGHHVFINLHSEKVYCLPDGYEVDDPSLDDIRHVLNPRF
TGAQVSQLDKSKQWARALDGSDYLPGMVGLNNIKETDFVNVIIQSLMRVTPLRDFFLIPE
NYRHSSSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAIMSASKKKFRIGVQSDPVEFFS
WLLNTLHSELGGTTLRNSSIIYQCFQGELEVLKELQSDPNNREISRLPFLMLGLDLPPPP
LFKDVMEKNIIPQVPLFNILKKFDGETPTEVVRPQPARMRYRVTRLPRYLILHMRRFKKN
NFFIEKNPTLVNFPVKNLELKDYIPLGSADGSKKARSKYDLIANTVHDGKPREGSYRVFV
QRKSEEVWYEMQDLHVTETLPQMVALSEAYMQIYEQQQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcaggcgctcccgacgatgccgccgctgctgctgccaagcgcggccgccaa
gagacggaggtgaggagggactgcccctaccttgacacagtgaatcgccaggttctggac
tttgatttcgagaagttttgctcggtttctctctcgaatctcaatgtctacgcctgcctg
gtgtgtgggaagtacttccaaggccggggaaggaagtctcatgcgtacacgcatagcctg
gaagccggccatcatgtgtttatcaacttgcacagtgagaaggtctactgccttcccgat
ggctacgaggtggatgatccatcgctggacgacattcgccatgtcttaaatcccaggttt
acgggcgctcaagtttcgcagctcgataaaagcaagcagtgggcgagagctctcgatggc
tccgactatctacctggaatggtggggcttaacaatatcaaggagacggactttgtcaac
gttataatacagtcgctcatgcgggtgactccgctccgggactttttcctgataccagag
aactacaggcattccagttctcctcttgtccatcgctttggggagctcacgaggaagata
tggcatgccaggaacttcaaaggacaggtcagtccccacgagtttcttcaggcgatcatg
tctgccagcaagaagaagttccgtataggtgtgcagtctgatcccgtggaattcttctcc
tggcttctgaatacgctgcacagcgaactgggtggtacaacactgcgcaacagtagcatc
atctaccaatgtttccagggcgagctagaagtgttgaaggaattgcagtccgacccgaat
aaccgagagattagcaggctgccatttctgatgcttggactcgatctacccccacctcca
ctttttaaagatgtcatggagaaaaacatcatcccacaggttcctcttttcaacatcttg
aaaaagttcgatggtgaaacgccgactgaggtggtgaggccacagccagcacgaatgcgt
tatcgtgtaacgaggttgccgaggtatttgatcttacacatgaggcgcttcaagaagaat
aacttcttcattgaaaagaatccaacactggtgaacttcccggtgaaaaatctggagctg
aaagactacatcccactgggttccgctgatggcagcaagaaagcccgctcaaagtacgat
ctcattgccaacaccgtccacgatggcaagcccagggaaggctcttaccgcgtgtttgtg
cagaggaaatcggaagaagtatggtacgagatgcaagaccttcacgtgacagaaactctg
ccgcagatggttgcgctctctgaggcgtatatgcagatctacgagcagcagcaataa
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