Selaginella moellendorffii: SELMODRAFT_100312
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Entry
SELMODRAFT_100312 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smo01002
]
SELMODRAFT_100312
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_100312
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_100312
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_100312
Enzymes [BR:
smo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
SELMODRAFT_100312
Peptidases and inhibitors [BR:
smo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
SELMODRAFT_100312
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SELMODRAFT_100312
Ubiquitin system [BR:
smo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
SELMODRAFT_100312
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SELMODRAFT_100312
SLIK complex
SELMODRAFT_100312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
9643037
NCBI-ProteinID:
XP_002973842
JGI:
100312
UniProt:
D8RS26
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MVTKSSSPCYRPCEHLVDYKSKHSTRGFRALQRCIVVLPPGRPSVRTLSCDEDPVPRCAS
CAKSHGRLYACLICSTISCYSSSSSHARSHALELPGHELAIDLDRAELFCCICNDQVYDA
DFDWVVVCAHASSLAKCTSFSNGRTAPPLNVYSRKRNRGAEYKPWEPSSKDPLVLERGAA
PLGLRGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHCHNKAACQSKVCLGCDMDDMFAAA
FSGDRTPYSPAQFLYRRYLFLFSFLNSWWQHAANLAGYEQQDAHDFFISAVEGIHANSQQ
PELRKGNDAECRCIVHRVFSGLLRSDVTCTACGFTSTKNDPCVDISLDLESTALEKQIYA
SSSTLLGCLDRFTRPERLGSNERFFCESCQSRQEAVKQMSVRKLPVVLCFHVKRFEHSAK
NYRKVDTYVQFPLSLNMACYLSSSIARLRHGNRLIFVEGKGELGGDNDSGSTSPSSEFEL
FAVVSHSGKLDGGHYVAYLRLGGEWYKCDDAWITRVGESVVRATQAYMLYYVQRSLSDES
STTIPERFNQHQTLVLDEKIGYTSLLADAVQA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggtgactaaatcgtcgtcgccatgctatcgcccctgcgagcacctggtggactacaaa
tccaagcacagcacccggggcttccgcgcgctccagcgatgcatcgtcgtcctcccaccg
ggccggcccagcgtgcgcactttgagctgcgacgaggatccagtccccaggtgcgcgtcc
tgtgccaagtcccacggccgcctctacgcttgcctcatctgttccaccatcagctgctac
tcttccagctccagccacgctcgatctcacgcgctggagctcccgggccacgagctcgcc
atcgatcttgaccgcgccgagctcttttgctgcatttgcaacgatcaagtctacgacgcc
gacttcgactgggtcgtcgtgtgcgctcatgctagttctctggcaaagtgtacctctttc
tccaacgggaggacggctcctcctctcaatgtgtatagccggaagaggaaccgaggggcc
gagtacaagccgtgggagccgagctccaaggacccgcttgtgctcgagcgcggcgccgct
cctctcggactccggggcctcaccaacatgggcagcacttgcttcatgaactcggtgctc
caggcgctgctccacacgccgcctctccggagctactttctcggtcactgccacaacaag
gctgcctgccagagcaaagtctgccttggatgcgacatggacgacatgttcgcggcagct
ttctccggggaccggacgccatacagccctgcacagttcctctacaggcgatacctcttt
cttttttctttcttgaacagctggtggcaacacgctgcaaatctggcaggctacgagcag
caggacgcgcacgatttctttatctcggcagtggaaggcatccacgccaactcgcagcag
cctgaacttcgcaaggggaacgacgccgagtgccgctgcattgtccatcgggtcttctcc
ggcttgctgcgatcggacgtaacttgcacggcatgcggcttcacgtctaccaagaacgat
ccctgcgtggacatttctctggatctggagtcgacggcgctggagaagcagatatacgcg
agctcgtccacgctgctgggctgcctggaccgctttaccaggccggagaggctgggcagc
aacgagaggttcttctgcgagtcgtgtcagtctagacaggaggccgtgaaacaaatgtca
gtgagaaagctaccggtggtgctgtgcttccacgtcaagagattcgagcactcggccaag
aactaccgcaaggtggacacatacgtgcagttcccactgtcgctgaacatggcttgctac
ctctcctcgtcgatagcgaggctcaggcacggcaacaggctcatttttgtagaaggaaaa
ggagagcttggcggtgacaacgatagcggtagcacgagtccctcgtccgagtttgagctt
tttgcagtagtcagccactctggcaagctcgacggtggccactacgtcgcctatctccgc
ctggggggcgagtggtacaagtgcgacgacgcctggataacaagagttggcgaaagcgtg
gtgagagcaacgcaagcttacatgctctactacgtccagagatcgttgtcggacgagtcg
agcaccaccattccggaacgctttaatcagcaccaaaccttagtactagacgagaagata
ggatacacttctctcctggcggacgctgtccaggcttag
DBGET
integrated database retrieval system
