KEGG   Selaginella moellendorffii: SELMODRAFT_100375
Entry
SELMODRAFT_100375 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
smo  Selaginella moellendorffii
Pathway
smo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SELMODRAFT_100375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_100375
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_100375
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     SELMODRAFT_100375
   Coactivators
    SAGA/TFTC/STAGA complex
     SELMODRAFT_100375
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     SELMODRAFT_100375
    STAGA complex
     SELMODRAFT_100375
    TFTC complex
     SELMODRAFT_100375
    SAGA complex
     SELMODRAFT_100375
    SLIK complex
     SELMODRAFT_100375
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 WD40_like Tricorn_2nd Beta-prop_DCAF12 WD_LRWD1 PROPPIN Beta-prop_Nup120_160 PALB2_WD40
Other DBs
NCBI-GeneID: 9655968
NCBI-ProteinID: XP_002974112
JGI: 100375
UniProt: D8RSH1
LinkDB
Position
Unknown
AA seq 590 aa
DNEAGRYKESYSKLRNWVHSSLDLYKTELLRILYPVFVHCYMELVAKGFAQEAREFFQSF
RDDHQPQHIRDLQKLEGVITPQHLQENETACTLQENKVHVKMCQYSFELLLQYLQSTESM
LMLGIVNSHINLKAVLPGQPAALVDDDESSSLPAKVQAVVEATNQKEIHWGILEGSLEDK
FEKQIAAELEKADADKDAETDEAKKRAADGKVKRVKRDKAGKGLKAEPAARSVPRLKPEL
TMPLLTDDFERQALDDLRNRVKLGSTALPSVSCYTFVNTNNSLNCASISADGAYLAGGFS
DSAIKLWDMVKMGEPSMYSDAGKQSLNKRPTSIRHYIRLVGHAGPVYGVDFSPEGDSLLS
ASGDCTIRLWSTRLNANLACYKGHNYPVWDVQYSPVGHYFASASYDRTARVWSMDRLQPL
RIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECVRIFTGHRSMIVSIAMSPD
GLFMASGDEDGAIMMWDLASSRCVTPLLGHTGCVWSLAFSGEGSILASGSADNTVRLWDV
NGSSKVTADKTRRLRLLKTLPTKSTPIYTLRFSRRNLLFVAGAFSPSKGH
NT seq 1773 nt   +upstreamnt  +downstreamnt
gacaatgaggctgggcggtacaaggagagctatagtaagctccgaaactgggttcactct
tctctggatctctacaagactgagctacttcgtatactctatccggtgtttgtgcactgt
tacatggaattggtggcgaaaggtttcgcgcaagaagcacgagaattcttccaaagtttt
cgggatgaccatcaaccgcaacatataagagatcttcagaaactagagggagtgattact
cctcagcacctccaggaaaacgagactgcatgcacgcttcaagagaacaaagtacacgtc
aagatgtgccagtattctttcgagttacttctgcaatatctccagagcacagaatcaatg
ttaatgcttgggatcgtcaattcacatatcaacttgaaagcagtccttcctgggcaacca
gcagctttagtggacgatgatgaatctagctctcttcctgcaaaggtccaggcagtggtt
gaagcgacaaatcaaaaggagattcactgggggattcttgaaggatccttggaagataag
tttgagaagcaaatagcggcagagctggagaaggctgacgcggataaagatgcggaaaca
gacgaagctaaaaaacgagctgccgacgggaaagtaaagagagtgaaaagggacaaagca
ggtaaaggattaaaggccgaaccggctgccagatctgtcccccgattgaagccggagttg
acgatgccactgctgactgacgactttgaacggcaagctctggatgacctgcgtaataga
gtcaagctcggaagcactgcgttgccatcagtgagctgttacacatttgtgaacacaaac
aacagcctgaactgtgcttcaatatcagcagacggtgcttatctggctggaggattctct
gattcggcaattaagctctgggacatggtaaagatgggcgagccttcaatgtattcggat
gctggtaagcagtctctaaataaaagaccaacatcaattcgtcactacatacgattggtt
ggacatgctggcccagtatatggtgtggactttagccctgagggtgattcactgctatca
gcatcaggagattgtacaatacgcctttggagcaccaggctgaatgccaacttagcttgc
tacaaaggacataactatcccgtctgggatgttcagtatagtccagtgggacattatttc
gcgagcgcgtcttacgaccggactgcaagagtgtggtccatggatagattgcaaccgctg
aggataatggctggccatctctcagacgtggattgcgtgcagtggcatgtcaattgcaat
tatattgctacaggctcaagcgacaagactgtcaggctgtgggacgtacaaactggagag
tgtgtacgcattttcacaggccacaggtcgatgatcgtgtcgattgccatgtcccctgat
ggactcttcatggcatcgggtgacgaggatggggccattatgatgtgggatttggcatcc
agccgctgcgtgactcctctgctgggtcacaccggctgcgtttggagcctcgctttcagt
ggcgaagggtccattctggcttctggttccgctgataacactgtcagactgtgggatgtg
aacgggagctctaaagtcactgcagacaaaacaaggagattgcgattgttgaagacactg
ccaaccaaatcgactccaatctacacactaagattttctaggaggaacttgctgttcgtc
gctggcgcctttagtcccagcaaaggccactaa

DBGET integrated database retrieval system