Selaginella moellendorffii: SELMODRAFT_100819
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Entry
SELMODRAFT_100819 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_100819
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SELMODRAFT_100819
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_100819
Prokaryotic type
SELMODRAFT_100819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
RETICULATA-like
Motif
Other DBs
NCBI-GeneID:
9657083
NCBI-ProteinID:
XP_002974164
JGI:
100819
UniProt:
D8RSR7
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MTKRGFSEEEEEERLKLPKLAMDVPGIQRYLVGIEYIGTRFSGWQRQEGVRTVQGTLEDA
FSSFMGQSVSTTGSSRTDAGVHALRNVFHVDLARTSKRKPGELLAPHPPDVIVRAVNHFL
QRESADVQVVDARFVPPDFHARFRAKERTYYYRILAGSCRASLFERDRAWHVEEPLNLIA
MQSACQVLLGTHDFSSFRASGCQAASPVKTLEELSIRETVSWPHLLTGCSSNAQSSNPDL
KSYVVTARAQSFLYHQVRLMVGTLKGVGAGKRTAEDVRKILEGRSISLALPMAPASGLFL
ADVKYDMEDTAVSGPVFLFIM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaggttttagcgaggaagaagaggaagaacgtctcaagctccccaagctg
gctatggatgttccgggcatccagcgctacttggtgggcattgagtacattggcactcgc
ttctccggatggcaaaggcaagaaggagtccgcacggtgcagggaacgctcgaggatgcg
ttttctagcttcatgggtcaatcggtgtcgaccactggttccagcagaactgatgctgga
gttcatgctcttcggaatgtcttccatgttgatcttgctcgaaccagcaaaagaaagcct
ggtgaattgctggctcctcatcctcccgacgtgattgttcgggccgtgaaccatttctta
cagagggagtcagctgatgttcaggtggtggatgctagatttgtgcctccggactttcac
gctcgattccgcgcgaaagaacgcacgtactactatcggatcctcgccggaagctgtcgg
gcttctctgttcgaaagagaccgtgcctggcatgtcgaggaacctttgaacctcatagca
atgcagagtgcctgtcaagttcttttgggaacgcacgattttagttccttcagagcgtct
ggttgccaagcagcgtctccggtcaaaactttggaggagctctcaatccgcgagacggtc
agctggccgcatcttctaactggatgctcctcaaacgctcaaagctccaatccagatctg
aagtcatacgtggtgacagctcgagcacagtcgtttctataccaccaggtgcgattgatg
gtaggcactctcaaaggtgttggagctggaaaacgcaccgctgaggatgttcgtaagatt
ctggaaggacgttcaatctcgcttgcacttcctatggctccagcgtcgggcctcttcctt
gccgatgtgaagtatgacatggaggacacggcggtaagcggtccagtattcttgtttata
atgtga
DBGET
integrated database retrieval system
